RNA–Protein interactions for RNA: ENST00000563218.5

SPG7-207, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 5

Gene SPG7, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-207ENST00000563218 SERTM1A2A2V5 107 aa12.42□□□□□ -0.42
SPG7-207ENST00000563218 NKX2-6A6NCS4 301 aa12.42□□□□□ -0.42
SPG7-207ENST00000563218 SAGE2PA6NJ88 616 aa12.42□□□□□ -0.42
SPG7-207ENST00000563218 CAPN14A8MX76 684 aa12.42□□□□□ -0.42
SPG7-207ENST00000563218 E9PLN8 166 aa12.42□□□□□ -0.42
SPG7-207ENST00000563218 OR1F1O43749 312 aa12.42□□□□□ -0.42
SPG7-207ENST00000563218 HRH2P25021 359 aa12.42□□□□□ -0.42
SPG7-207ENST00000563218 CCR8P51685 355 aa12.42□□□□□ -0.42
SPG7-207ENST00000563218 ERVK-8P63133 956 aa12.42□□□□□ -0.42
SPG7-207ENST00000563218 PHEXP78562 749 aa12.42□□□□□ -0.42
SPG7-207ENST00000563218 HYAL2Q12891 473 aa12.42□□□□□ -0.42
SPG7-207ENST00000563218 CSTF3Q12996 717 aaKnown RBP12.42□□□□□ -0.42
SPG7-207ENST00000563218 GSTA3Q16772 222 aa12.42□□□□□ -0.42
SPG7-207ENST00000563218 SMU1Q2TAY7 513 aa12.42□□□□□ -0.42
SPG7-207ENST00000563218 C6orf136Q5SQH8 315 aa12.42□□□□□ -0.42
SPG7-207ENST00000563218 C10orf62Q5T681 223 aaPredicted RBP12.42□□□□□ -0.42
SPG7-207ENST00000563218 TREML1Q86YW5 311 aa12.42□□□□□ -0.42
SPG7-207ENST00000563218 FNDC5Q8NAU1 212 aa12.42□□□□□ -0.42
SPG7-207ENST00000563218 FAM98AQ8NCA5 519 aaKnown RBP12.42□□□□□ -0.42
SPG7-207ENST00000563218 NFAM1Q8NET5 270 aaPredicted RBP12.42□□□□□ -0.42
SPG7-207ENST00000563218 WDR20Q8TBZ3 569 aa12.42□□□□□ -0.42
SPG7-207ENST00000563218 CHTF18Q8WVB6 975 aa12.42□□□□□ -0.42
SPG7-207ENST00000563218 PTCHD1Q96NR3 888 aa12.42□□□□□ -0.42
SPG7-207ENST00000563218 TREX2Q9BQ50 279 aaPredicted RBP12.42□□□□□ -0.42
SPG7-207ENST00000563218 VKORC1Q9BQB6 163 aa12.42□□□□□ -0.42
SPG7-207ENST00000563218 AIF1LQ9BQI0 150 aa12.42□□□□□ -0.42
SPG7-207ENST00000563218 KLHL31Q9H511 634 aa12.42□□□□□ -0.42
SPG7-207ENST00000563218 ZNF385DQ9H6B1 395 aa12.42□□□□□ -0.42
SPG7-207ENST00000563218 MCCC2Q9HCC0 563 aa12.42□□□□□ -0.42
SPG7-207ENST00000563218 NECTIN3Q9NQS3 549 aa12.42□□□□□ -0.42
SPG7-207ENST00000563218 NPDC1Q9NQX5 325 aaPredicted RBP12.42□□□□□ -0.42
SPG7-207ENST00000563218 ARL8BQ9NVJ2 186 aa12.42□□□□□ -0.42
SPG7-207ENST00000563218 ZNF223Q9UK11 482 aaPredicted RBP12.42□□□□□ -0.42
SPG7-207ENST00000563218 SPG11Q96JI7 2443 aa12.41□□□□□ -0.42
SPG7-207ENST00000563218 FAM90A27PA6NNH2 459 aa12.41□□□□□ -0.42
SPG7-207ENST00000563218 PRRG2O14669 202 aa12.41□□□□□ -0.42
SPG7-207ENST00000563218 LSM1O15116 133 aaKnown RBP12.41□□□□□ -0.42
SPG7-207ENST00000563218 HS6ST1O60243 411 aa12.41□□□□□ -0.42
SPG7-207ENST00000563218 CDC40O60508 579 aaKnown RBP eCLIP12.41□□□□□ -0.42
SPG7-207ENST00000563218 HNRNPCL1O60812 293 aaKnown RBP12.41□□□□□ -0.42
SPG7-207ENST00000563218 RSL1D1O76021 490 aaKnown RBP12.41□□□□□ -0.42
SPG7-207ENST00000563218 TPOP07202 933 aa12.41□□□□□ -0.42
SPG7-207ENST00000563218 ALDOCP09972 364 aaKnown RBP12.41□□□□□ -0.42
SPG7-207ENST00000563218 HSD3B1P14060 373 aa12.41□□□□□ -0.42
SPG7-207ENST00000563218 IDO1P14902 403 aa12.41□□□□□ -0.42
SPG7-207ENST00000563218 ALOX12P18054 663 aa12.41□□□□□ -0.42
SPG7-207ENST00000563218 CALB2P22676 271 aa12.41□□□□□ -0.42
SPG7-207ENST00000563218 HSD3B2P26439 372 aa12.41□□□□□ -0.42
SPG7-207ENST00000563218 PIK3R1P27986 724 aa12.41□□□□□ -0.42
SPG7-207ENST00000563218 PRDX6P30041 224 aa12.41□□□□□ -0.42
SPG7-207ENST00000563218 CYB561P49447 251 aa12.41□□□□□ -0.42
SPG7-207ENST00000563218 NEK2P51955 445 aa12.41□□□□□ -0.42
SPG7-207ENST00000563218 GPR85P60893 370 aa12.41□□□□□ -0.42
SPG7-207ENST00000563218 RAB8AP61006 207 aa12.41□□□□□ -0.42
SPG7-207ENST00000563218 HMGCS1Q01581 520 aa12.41□□□□□ -0.42
SPG7-207ENST00000563218 EMX2Q04743 252 aa12.41□□□□□ -0.42
SPG7-207ENST00000563218 MAD2L1Q13257 205 aaPredicted RBP12.41□□□□□ -0.42
SPG7-207ENST00000563218 DDX39BQ13838 428 aaKnown RBP12.41□□□□□ -0.42
SPG7-207ENST00000563218 HERC3Q15034 1050 aa12.41□□□□□ -0.42
SPG7-207ENST00000563218 RPS6KA2Q15349 733 aa12.41□□□□□ -0.42
SPG7-207ENST00000563218 AP5B1Q2VPB7 878 aa12.41□□□□□ -0.42
SPG7-207ENST00000563218 CMPK2Q5EBM0 449 aa12.41□□□□□ -0.42
SPG7-207ENST00000563218 SULF2Q8IWU5 870 aa12.41□□□□□ -0.42
SPG7-207ENST00000563218 LAS2Q8IYD9 372 aa12.41□□□□□ -0.42
SPG7-207ENST00000563218 LGI4Q8N135 537 aa12.41□□□□□ -0.42
SPG7-207ENST00000563218 ANKRD53Q8N9V6 530 aa12.41□□□□□ -0.42
SPG7-207ENST00000563218 ABHD11Q8NFV4 315 aa12.41□□□□□ -0.42
SPG7-207ENST00000563218 OR7G3Q8NG95 312 aa12.41□□□□□ -0.42
SPG7-207ENST00000563218 OR4K1Q8NGD4 311 aa12.41□□□□□ -0.42
SPG7-207ENST00000563218 UTP15Q8TED0 518 aaKnown RBP12.41□□□□□ -0.42
SPG7-207ENST00000563218 CA5BP1Q8WTZ4 195 aa12.41□□□□□ -0.42
SPG7-207ENST00000563218 CMTM5Q96DZ9 223 aa12.41□□□□□ -0.42
SPG7-207ENST00000563218 ACPTQ9BZG2 426 aa12.41□□□□□ -0.42
SPG7-207ENST00000563218 UCK2Q9BZX2 261 aa12.41□□□□□ -0.42
SPG7-207ENST00000563218 PITHD1Q9GZP4 211 aaPredicted RBP12.41□□□□□ -0.42
SPG7-207ENST00000563218 RHBGQ9H310 441 aa12.41□□□□□ -0.42
SPG7-207ENST00000563218 TRIM45Q9H8W5 580 aaPredicted RBP12.41□□□□□ -0.42
SPG7-207ENST00000563218 BRF2Q9HAW0 419 aa12.41□□□□□ -0.42
SPG7-207ENST00000563218 LRTM1Q9HBL6 345 aa12.41□□□□□ -0.42
SPG7-207ENST00000563218 C1orf109Q9NX04 203 aa12.41□□□□□ -0.42
SPG7-207ENST00000563218 TAGLN3Q9UI15 199 aa12.41□□□□□ -0.42
SPG7-207ENST00000563218 SLC12A4Q9UP95 1085 aa12.41□□□□□ -0.42
SPG7-207ENST00000563218 CCL27Q9Y4X3 112 aa12.41□□□□□ -0.42
SPG7-207ENST00000563218 EXPH5Q8NEV8 1989 aa12.4□□□□□ -0.42
SPG7-207ENST00000563218 KIAA1549Q9HCM3 1950 aa12.4□□□□□ -0.42
SPG7-207ENST00000563218 IGKV3D-11A0A0A0MRZ8 115 aa12.4□□□□□ -0.42
SPG7-207ENST00000563218 TRBV11-1A0A0K0K1C0 115 aa12.4□□□□□ -0.42
SPG7-207ENST00000563218 TCRBV16S1A1N1A0A5B0 115 aa12.4□□□□□ -0.42
SPG7-207ENST00000563218 TRBC2A0A5B9 178 aa12.4□□□□□ -0.42
SPG7-207ENST00000563218 PINLYPA6NC86 204 aa12.4□□□□□ -0.42
SPG7-207ENST00000563218 TGFBR3LH3BV60 316 aa12.4□□□□□ -0.42
SPG7-207ENST00000563218 TFECO14948 347 aaPredicted RBP12.4□□□□□ -0.42
SPG7-207ENST00000563218 PRKNO60260 465 aaPredicted RBP12.4□□□□□ -0.42
SPG7-207ENST00000563218 SEC22BO75396 215 aa12.4□□□□□ -0.42
SPG7-207ENST00000563218 PDE9AO76083 593 aa12.4□□□□□ -0.42
SPG7-207ENST00000563218 T-ENOLP0DO92 83 aa12.4□□□□□ -0.42
SPG7-207ENST00000563218 IGFBP2P18065 325 aa12.4□□□□□ -0.42
SPG7-207ENST00000563218 PPP2R1BP30154 601 aa12.4□□□□□ -0.42
SPG7-207ENST00000563218 GRK3P35626 688 aa12.4□□□□□ -0.42
SPG7-207ENST00000563218 HLCSP50747 726 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms