RNA–Protein interactions for RNA: ENST00000563149.1

USB1-207, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,751 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-207ENST00000563149 SYT14P1Q58G82 188 aa12.37□□□□□ -0.43
USB1-207ENST00000563149 ZNF362Q5T0B9 420 aaPredicted RBP12.37□□□□□ -0.43
USB1-207ENST00000563149 OR4C11Q6IEV9 310 aa12.37□□□□□ -0.43
USB1-207ENST00000563149 BHLHB9Q6PI77 547 aa12.37□□□□□ -0.43
USB1-207ENST00000563149 ADAMTSL4Q6UY14 1074 aa12.37□□□□□ -0.43
USB1-207ENST00000563149 MRGPREQ86SM8 312 aa12.37□□□□□ -0.43
USB1-207ENST00000563149 LAPTM4BQ86VI4 370 aa12.37□□□□□ -0.43
USB1-207ENST00000563149 RAB42Q8N4Z0 105 aa12.37□□□□□ -0.43
USB1-207ENST00000563149 TTLQ8NG68 377 aa12.37□□□□□ -0.43
USB1-207ENST00000563149 OR4K5Q8NGD3 323 aa12.37□□□□□ -0.43
USB1-207ENST00000563149 SFXN5Q8TD22 340 aa12.37□□□□□ -0.43
USB1-207ENST00000563149 TRMT61AQ96FX7 289 aaKnown RBP12.37□□□□□ -0.43
USB1-207ENST00000563149 ZNF582Q96NG8 517 aaPredicted RBP12.37□□□□□ -0.43
USB1-207ENST00000563149 CAMK1GQ96NX5 476 aa12.37□□□□□ -0.43
USB1-207ENST00000563149 NELL2Q99435 816 aa12.37□□□□□ -0.43
USB1-207ENST00000563149 ACAT2Q9BWD1 397 aa12.37□□□□□ -0.43
USB1-207ENST00000563149 SLC22A4Q9H015 551 aa12.37□□□□□ -0.43
USB1-207ENST00000563149 ABCG4Q9H172 646 aa12.37□□□□□ -0.43
USB1-207ENST00000563149 SERHL2Q9H4I8 314 aa12.37□□□□□ -0.43
USB1-207ENST00000563149 LHX9Q9NQ69 397 aa12.37□□□□□ -0.43
USB1-207ENST00000563149 PLAGL1Q9UM63 463 aa12.37□□□□□ -0.43
USB1-207ENST00000563149 RBMX2Q9Y388 322 aaKnown RBP12.37□□□□□ -0.43
USB1-207ENST00000563149 EXOSC1Q9Y3B2 195 aaKnown RBP12.37□□□□□ -0.43
USB1-207ENST00000563149 CEP350Q5VT06 3117 aa12.37□□□□□ -0.43
USB1-207ENST00000563149 A0A0G2JPF8 293 aa12.36□□□□□ -0.43
USB1-207ENST00000563149 PRAMEF27A3QJZ7 478 aa12.36□□□□□ -0.43
USB1-207ENST00000563149 HNRNPCL2B2RXH8 293 aa12.36□□□□□ -0.43
USB1-207ENST00000563149 HNRNPCL3B7ZW38 293 aa12.36□□□□□ -0.43
USB1-207ENST00000563149 PRODHO43272 600 aa12.36□□□□□ -0.43
USB1-207ENST00000563149 TMPRSS11DO60235 418 aa12.36□□□□□ -0.43
USB1-207ENST00000563149 ADH1CP00326 375 aa12.36□□□□□ -0.43
USB1-207ENST00000563149 TSPAN19P0C672 248 aa12.36□□□□□ -0.43
USB1-207ENST00000563149 HNRNPCL4P0DMR1 293 aa12.36□□□□□ -0.43
USB1-207ENST00000563149 GAAP10253 952 aa12.36□□□□□ -0.43
USB1-207ENST00000563149 ACP2P11117 423 aa12.36□□□□□ -0.43
USB1-207ENST00000563149 IFNGR2P38484 337 aa12.36□□□□□ -0.43
USB1-207ENST00000563149 RFX2P48378 723 aa12.36□□□□□ -0.43
USB1-207ENST00000563149 PIN1Q13526 163 aaPredicted RBP12.36□□□□□ -0.43
USB1-207ENST00000563149 BAK1Q16611 211 aa12.36□□□□□ -0.43
USB1-207ENST00000563149 ATAD3CQ5T2N8 411 aa12.36□□□□□ -0.43
USB1-207ENST00000563149 C9orf64Q5T6V5 341 aa12.36□□□□□ -0.43
USB1-207ENST00000563149 FAM46CQ5VWP2 391 aa12.36□□□□□ -0.43
USB1-207ENST00000563149 LIPKQ5VXJ0 399 aa12.36□□□□□ -0.43
USB1-207ENST00000563149 FAM180BQ6P0A1 224 aa12.36□□□□□ -0.43
USB1-207ENST00000563149 SLC36A4Q6YBV0 504 aa12.36□□□□□ -0.43
USB1-207ENST00000563149 ZER1Q7Z7L7 766 aa12.36□□□□□ -0.43
USB1-207ENST00000563149 LRRTM4Q86VH4 590 aa12.36□□□□□ -0.43
USB1-207ENST00000563149 LAX1Q8IWV1 398 aa12.36□□□□□ -0.43
USB1-207ENST00000563149 GJD3Q8N144 294 aa12.36□□□□□ -0.43
USB1-207ENST00000563149 MORN4Q8NDC4 146 aa12.36□□□□□ -0.43
USB1-207ENST00000563149 TMEM163Q8TC26 289 aa12.36□□□□□ -0.43
USB1-207ENST00000563149 GNPDA2Q8TDQ7 276 aa12.36□□□□□ -0.43
USB1-207ENST00000563149 CXorf40AQ8TE69 158 aa12.36□□□□□ -0.43
USB1-207ENST00000563149 CREB3L4Q8TEY5 395 aa12.36□□□□□ -0.43
USB1-207ENST00000563149 XAGE5Q8WWM1 108 aa12.36□□□□□ -0.43
USB1-207ENST00000563149 AP3S1Q92572 193 aa12.36□□□□□ -0.43
USB1-207ENST00000563149 MOAP1Q96BY2 351 aa12.36□□□□□ -0.43
USB1-207ENST00000563149 KCTD7Q96MP8 289 aa12.36□□□□□ -0.43
USB1-207ENST00000563149 FAIM2Q9BWQ8 316 aa12.36□□□□□ -0.43
USB1-207ENST00000563149 PINK1Q9BXM7 581 aa12.36□□□□□ -0.43
USB1-207ENST00000563149 PRRG3Q9BZD7 231 aa12.36□□□□□ -0.43
USB1-207ENST00000563149 TP63Q9H3D4 680 aaPredicted RBP12.36□□□□□ -0.43
USB1-207ENST00000563149 GLIPR2Q9H4G4 154 aa12.36□□□□□ -0.43
USB1-207ENST00000563149 CUEDC1Q9NWM3 386 aaPredicted RBP12.36□□□□□ -0.43
USB1-207ENST00000563149 SNX7Q9UNH6 387 aa12.36□□□□□ -0.43
USB1-207ENST00000563149 GSTK1Q9Y2Q3 226 aa12.36□□□□□ -0.43
USB1-207ENST00000563149 N6AMT1Q9Y5N5 214 aa12.36□□□□□ -0.43
USB1-207ENST00000563149 A0A0A6YYD5 115 aa12.35□□□□□ -0.43
USB1-207ENST00000563149 SLC30A4O14863 429 aa12.35□□□□□ -0.43
USB1-207ENST00000563149 SSX4O60224 188 aa12.35□□□□□ -0.43
USB1-207ENST00000563149 EPHX1P07099 455 aa12.35□□□□□ -0.43
USB1-207ENST00000563149 HNRNPA1P09651 372 aaKnown RBP eCLIP12.35□□□□□ -0.43
USB1-207ENST00000563149 LINC00271P0C7V0 271 aa12.35□□□□□ -0.43
USB1-207ENST00000563149 NTSP30990 170 aa12.35□□□□□ -0.43
USB1-207ENST00000563149 GPC1P35052 558 aa12.35□□□□□ -0.43
USB1-207ENST00000563149 ETV5P41161 510 aa12.35□□□□□ -0.43
USB1-207ENST00000563149 ETV1P50549 477 aa12.35□□□□□ -0.43
USB1-207ENST00000563149 ELAVL3Q14576 367 aaKnown RBP12.35□□□□□ -0.43
USB1-207ENST00000563149 TMEM44Q2T9K0 475 aa12.35□□□□□ -0.43
USB1-207ENST00000563149 TMEM35AQ53FP2 167 aa12.35□□□□□ -0.43
USB1-207ENST00000563149 METRNLQ641Q3 311 aa12.35□□□□□ -0.43
USB1-207ENST00000563149 FAM131AQ6UXB0 335 aa12.35□□□□□ -0.43
USB1-207ENST00000563149 WDR53Q7Z5U6 358 aaPredicted RBP12.35□□□□□ -0.43
USB1-207ENST00000563149 C2orf73Q8N5S3 287 aaPredicted RBP12.35□□□□□ -0.43
USB1-207ENST00000563149 MRPL43Q8N983 215 aaKnown RBP12.35□□□□□ -0.43
USB1-207ENST00000563149 SUN3Q8TAQ9 357 aa12.35□□□□□ -0.43
USB1-207ENST00000563149 RAB7BQ96AH8 199 aa12.35□□□□□ -0.43
USB1-207ENST00000563149 LRR1Q96L50 414 aa12.35□□□□□ -0.43
USB1-207ENST00000563149 AMDHD1Q96NU7 426 aa12.35□□□□□ -0.43
USB1-207ENST00000563149 MENTQ9BUN1 341 aa12.35□□□□□ -0.43
USB1-207ENST00000563149 PLEKHB1Q9UF11 243 aaPredicted RBP12.35□□□□□ -0.43
USB1-207ENST00000563149 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.35□□□□□ -0.43
USB1-207ENST00000563149 A0A1W2PPV9 198 aa12.35□□□□□ -0.43
USB1-207ENST00000563149 FABP12A6NFH5 140 aa12.35□□□□□ -0.43
USB1-207ENST00000563149 A8MU76 341 aa12.35□□□□□ -0.43
USB1-207ENST00000563149 CENPBD1B2RD01 187 aa12.35□□□□□ -0.43
USB1-207ENST00000563149 WWP2O00308 870 aa12.35□□□□□ -0.43
USB1-207ENST00000563149 SYT5O00445 386 aa12.35□□□□□ -0.43
USB1-207ENST00000563149 CLTBP09497 229 aa12.35□□□□□ -0.43
USB1-207ENST00000563149 PTBP1P26599 531 aaKnown RBP eCLIP12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms