RNA–Protein interactions for RNA: ENST00000562540.1

DENND4A-205, Transcript of DENN domain containing 4A, humanhuman

TSL 2

Gene DENND4A, Length 629 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4A-205ENST00000562540 PRAM1Q96QH2 718 aa2.31□□□□□ -2.04
DENND4A-205ENST00000562540 MCCC1Q96RQ3 725 aaPredicted RBP2.31□□□□□ -2.04
DENND4A-205ENST00000562540 ZBP1Q9H171 429 aa2.31□□□□□ -2.04
DENND4A-205ENST00000562540 TMEM245Q9H330 911 aa2.31□□□□□ -2.04
DENND4A-205ENST00000562540 MID1IP1Q9NPA3 183 aa2.31□□□□□ -2.04
DENND4A-205ENST00000562540 PRMT8Q9NR22 394 aaPredicted RBP2.31□□□□□ -2.04
DENND4A-205ENST00000562540 VPS54Q9P1Q0 977 aa2.31□□□□□ -2.04
DENND4A-205ENST00000562540 ERVK-18Q9QC07 812 aa2.31□□□□□ -2.04
DENND4A-205ENST00000562540 MTRRQ9UBK8 725 aa2.31□□□□□ -2.04
DENND4A-205ENST00000562540 RSPH14Q9UHP6 348 aa2.31□□□□□ -2.04
DENND4A-205ENST00000562540 SLC9A8Q9Y2E8 581 aa2.31□□□□□ -2.04
DENND4A-205ENST00000562540 MRPS2Q9Y399 296 aaKnown RBP2.31□□□□□ -2.04
DENND4A-205ENST00000562540 ATG4BQ9Y4P1 393 aa2.31□□□□□ -2.04
DENND4A-205ENST00000562540 COL16A1Q07092 1604 aaPredicted RBP2.31□□□□□ -2.04
DENND4A-205ENST00000562540 LRRK1Q38SD2 2015 aa2.3□□□□□ -2.04
DENND4A-205ENST00000562540 SH2D1BO14796 132 aa2.3□□□□□ -2.04
DENND4A-205ENST00000562540 KINO60870 393 aaKnown RBP2.3□□□□□ -2.04
DENND4A-205ENST00000562540 RHBDL1O75783 438 aa2.3□□□□□ -2.04
DENND4A-205ENST00000562540 REC8O95072 547 aa2.3□□□□□ -2.04
DENND4A-205ENST00000562540 PNPP00491 289 aa2.3□□□□□ -2.04
DENND4A-205ENST00000562540 PIGRP01833 764 aa2.3□□□□□ -2.04
DENND4A-205ENST00000562540 THY1P04216 161 aa2.3□□□□□ -2.04
DENND4A-205ENST00000562540 HMOX1P09601 288 aa2.3□□□□□ -2.04
DENND4A-205ENST00000562540 UCP1P25874 307 aa2.3□□□□□ -2.04
DENND4A-205ENST00000562540 MARCKSP29966 332 aaPredicted RBP2.3□□□□□ -2.04
DENND4A-205ENST00000562540 PITPNBP48739 271 aa2.3□□□□□ -2.04
DENND4A-205ENST00000562540 NDST1P52848 882 aa2.3□□□□□ -2.04
DENND4A-205ENST00000562540 IST1P53990 364 aa2.3□□□□□ -2.04
DENND4A-205ENST00000562540 HMGCS2P54868 508 aa2.3□□□□□ -2.04
DENND4A-205ENST00000562540 RPS4XP62701 263 aaKnown RBP2.3□□□□□ -2.04
DENND4A-205ENST00000562540 CCZ1BP86790 482 aa2.3□□□□□ -2.04
DENND4A-205ENST00000562540 CCZ1P86791 482 aaPredicted RBP2.3□□□□□ -2.04
DENND4A-205ENST00000562540 GFPT1Q06210 699 aaPredicted RBP2.3□□□□□ -2.04
DENND4A-205ENST00000562540 C17orf67Q0P5P2 114 aa2.3□□□□□ -2.04
DENND4A-205ENST00000562540 PPP1R8Q12972 351 aaKnown RBP2.3□□□□□ -2.04
DENND4A-205ENST00000562540 TSTA3Q13630 321 aaPredicted RBP2.3□□□□□ -2.04
DENND4A-205ENST00000562540 RFTN1Q14699 578 aaPredicted RBP2.3□□□□□ -2.04
DENND4A-205ENST00000562540 C17orf58Q2M2W7 97 aa2.3□□□□□ -2.04
DENND4A-205ENST00000562540 ATAD3CQ5T2N8 411 aa2.3□□□□□ -2.04
DENND4A-205ENST00000562540 FHL5Q5TD97 284 aa2.3□□□□□ -2.04
DENND4A-205ENST00000562540 APOOLQ6UXV4 268 aa2.3□□□□□ -2.04
DENND4A-205ENST00000562540 GPR142Q7Z601 462 aa2.3□□□□□ -2.04
DENND4A-205ENST00000562540 SLC22A16Q86VW1 577 aa2.3□□□□□ -2.04
DENND4A-205ENST00000562540 SNX32Q86XE0 403 aa2.3□□□□□ -2.04
DENND4A-205ENST00000562540 ZBED8Q8IZ13 594 aa2.3□□□□□ -2.04
DENND4A-205ENST00000562540 TBCKQ8TEA7 893 aa2.3□□□□□ -2.04
DENND4A-205ENST00000562540 KRT35Q92764 455 aa2.3□□□□□ -2.04
DENND4A-205ENST00000562540 BIRC7Q96CA5 298 aa2.3□□□□□ -2.04
DENND4A-205ENST00000562540 RAB3CQ96E17 227 aa2.3□□□□□ -2.04
DENND4A-205ENST00000562540 SERAC1Q96JX3 654 aa2.3□□□□□ -2.04
DENND4A-205ENST00000562540 CABS1Q96KC9 395 aa2.3□□□□□ -2.04
DENND4A-205ENST00000562540 C19orf43Q9BQ61 176 aa2.3□□□□□ -2.04
DENND4A-205ENST00000562540 JPH2Q9BR39 696 aaPredicted RBP2.3□□□□□ -2.04
DENND4A-205ENST00000562540 ST6GALNAC5Q9BVH7 336 aa2.3□□□□□ -2.04
DENND4A-205ENST00000562540 TRPV6Q9H1D0 765 aa2.3□□□□□ -2.04
DENND4A-205ENST00000562540 PIGVQ9NUD9 493 aa2.3□□□□□ -2.04
DENND4A-205ENST00000562540 COMMD8Q9NX08 183 aa2.3□□□□□ -2.04
DENND4A-205ENST00000562540 SENP1Q9P0U3 644 aa2.3□□□□□ -2.04
DENND4A-205ENST00000562540 DHRS4-AS1Q9P1J3 65 aa2.3□□□□□ -2.04
DENND4A-205ENST00000562540 RNF24Q9Y225 148 aa2.3□□□□□ -2.04
DENND4A-205ENST00000562540 ZNF256Q9Y2P7 627 aaPredicted RBP2.3□□□□□ -2.04
DENND4A-205ENST00000562540 SLC6A5Q9Y345 797 aa2.3□□□□□ -2.04
DENND4A-205ENST00000562540 NAALAD2Q9Y3Q0 740 aa2.3□□□□□ -2.04
DENND4A-205ENST00000562540 IGHV3OR16-12A0A075B7B8 117 aa2.29□□□□□ -2.04
DENND4A-205ENST00000562540 TRABD2BA6NFA1 517 aa2.29□□□□□ -2.04
DENND4A-205ENST00000562540 ZSCAN5CA6NGD5 496 aaPredicted RBP2.29□□□□□ -2.04
DENND4A-205ENST00000562540 K7ERI5 159 aa2.29□□□□□ -2.04
DENND4A-205ENST00000562540 DDX39AO00148 427 aaKnown RBP2.29□□□□□ -2.04
DENND4A-205ENST00000562540 CHEK1O14757 476 aa2.29□□□□□ -2.04
DENND4A-205ENST00000562540 CFLARO15519 480 aa2.29□□□□□ -2.04
DENND4A-205ENST00000562540 NUDT14O95848 222 aa2.29□□□□□ -2.04
DENND4A-205ENST00000562540 GOT2P00505 430 aaKnown RBP2.29□□□□□ -2.04
DENND4A-205ENST00000562540 IGHG3P01860 377 aa2.29□□□□□ -2.04
DENND4A-205ENST00000562540 ABHD2P08910 425 aa2.29□□□□□ -2.04
DENND4A-205ENST00000562540 SNRPCP09234 159 aaKnown RBP2.29□□□□□ -2.04
DENND4A-205ENST00000562540 KLK2P20151 261 aa2.29□□□□□ -2.04
DENND4A-205ENST00000562540 FCARP24071 287 aa2.29□□□□□ -2.04
DENND4A-205ENST00000562540 HMGCLP35914 325 aa2.29□□□□□ -2.04
DENND4A-205ENST00000562540 TNFRSF4P43489 277 aa2.29□□□□□ -2.04
DENND4A-205ENST00000562540 PPIAP62937 165 aaKnown RBP2.29□□□□□ -2.04
DENND4A-205ENST00000562540 UBXN1Q04323 297 aa2.29□□□□□ -2.04
DENND4A-205ENST00000562540 PDE7AQ13946 482 aa2.29□□□□□ -2.04
DENND4A-205ENST00000562540 LASP1Q14847 261 aaKnown RBP2.29□□□□□ -2.04
DENND4A-205ENST00000562540 SLC10A1Q14973 349 aa2.29□□□□□ -2.04
DENND4A-205ENST00000562540 SHROOM1Q2M3G4 852 aaPredicted RBP2.29□□□□□ -2.04
DENND4A-205ENST00000562540 HKDC1Q2TB90 917 aa2.29□□□□□ -2.04
DENND4A-205ENST00000562540 TIMM50Q3ZCQ8 353 aa2.29□□□□□ -2.04
DENND4A-205ENST00000562540 EPC2Q52LR7 807 aa2.29□□□□□ -2.04
DENND4A-205ENST00000562540 TCHHL1Q5QJ38 904 aaPredicted RBP2.29□□□□□ -2.04
DENND4A-205ENST00000562540 LINC00242Q5T6M2 205 aa2.29□□□□□ -2.04
DENND4A-205ENST00000562540 MARC1Q5VT66 337 aa2.29□□□□□ -2.04
DENND4A-205ENST00000562540 PRAMEF7Q5VXH5 474 aa2.29□□□□□ -2.04
DENND4A-205ENST00000562540 HIST2H2AA3Q6FI13 130 aa2.29□□□□□ -2.04
DENND4A-205ENST00000562540 ETFRF1Q6IPR1 90 aa2.29□□□□□ -2.04
DENND4A-205ENST00000562540 KRTAP5-7Q6L8G8 165 aa2.29□□□□□ -2.04
DENND4A-205ENST00000562540 RHBDD2Q6NTF9 364 aa2.29□□□□□ -2.04
DENND4A-205ENST00000562540 CWC27Q6UX04 472 aaKnown RBP2.29□□□□□ -2.04
DENND4A-205ENST00000562540 PP632Q6XCG6 107 aa2.29□□□□□ -2.04
DENND4A-205ENST00000562540 LUZP1Q86V48 1076 aa2.29□□□□□ -2.04
DENND4A-205ENST00000562540 NAXDQ8IW45 347 aa2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms