RNA–Protein interactions for RNA: ENST00000562118.1

CDH1-204, Transcript of cadherin 1, humanhuman

TSL 2

Gene CDH1, Length 952 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-204ENST00000562118 RPS19BP1Q86WX3 136 aaKnown RBP12.45□□□□□ -0.42
CDH1-204ENST00000562118 BEST3Q8N1M1 668 aa12.45□□□□□ -0.42
CDH1-204ENST00000562118 OR2L13Q8N349 312 aa12.45□□□□□ -0.42
CDH1-204ENST00000562118 ZNF843Q8N446 348 aa12.45□□□□□ -0.42
CDH1-204ENST00000562118 MDS2Q8NDY4 140 aa12.45□□□□□ -0.42
CDH1-204ENST00000562118 CLHC1Q8NHS4 586 aa12.45□□□□□ -0.42
CDH1-204ENST00000562118 ADIPOR1Q96A54 375 aa12.45□□□□□ -0.42
CDH1-204ENST00000562118 TP53INP1Q96A56 240 aa12.45□□□□□ -0.42
CDH1-204ENST00000562118 PNPLA2Q96AD5 504 aa12.45□□□□□ -0.42
CDH1-204ENST00000562118 OR52B2Q96RD2 323 aa12.45□□□□□ -0.42
CDH1-204ENST00000562118 SIKE1Q9BRV8 207 aa12.45□□□□□ -0.42
CDH1-204ENST00000562118 DEFB126Q9BYW3 111 aa12.45□□□□□ -0.42
CDH1-204ENST00000562118 TRIM4Q9C037 500 aa12.45□□□□□ -0.42
CDH1-204ENST00000562118 WWTR1Q9GZV5 400 aa12.45□□□□□ -0.42
CDH1-204ENST00000562118 CLMPQ9H6B4 373 aa12.45□□□□□ -0.42
CDH1-204ENST00000562118 EPS8L2Q9H6S3 715 aa12.45□□□□□ -0.42
CDH1-204ENST00000562118 WDR55Q9H6Y2 383 aaPredicted RBP12.45□□□□□ -0.42
CDH1-204ENST00000562118 SH2D2AQ9NP31 389 aa12.45□□□□□ -0.42
CDH1-204ENST00000562118 ZNF71Q9NQZ8 489 aaPredicted RBP12.45□□□□□ -0.42
CDH1-204ENST00000562118 CSAG2Q9Y5P2 127 aa12.45□□□□□ -0.42
CDH1-204ENST00000562118 ZNF462Q96JM2 2506 aa12.44□□□□□ -0.42
CDH1-204ENST00000562118 PDPK1O15530 556 aa12.44□□□□□ -0.42
CDH1-204ENST00000562118 ZNF354AO60765 605 aaPredicted RBP12.44□□□□□ -0.42
CDH1-204ENST00000562118 BCAS2O75934 225 aaPredicted RBP12.44□□□□□ -0.42
CDH1-204ENST00000562118 NEURL1O76050 574 aa12.44□□□□□ -0.42
CDH1-204ENST00000562118 WDPCPO95876 746 aa12.44□□□□□ -0.42
CDH1-204ENST00000562118 DDX5P17844 614 aaKnown RBP12.44□□□□□ -0.42
CDH1-204ENST00000562118 TNNI3P19429 210 aa12.44□□□□□ -0.42
CDH1-204ENST00000562118 SSTR4P31391 388 aa12.44□□□□□ -0.42
CDH1-204ENST00000562118 MAP3K8P41279 467 aa12.44□□□□□ -0.42
CDH1-204ENST00000562118 ZFP36L2P47974 494 aaKnown RBP12.44□□□□□ -0.42
CDH1-204ENST00000562118 IDH3AP50213 366 aa12.44□□□□□ -0.42
CDH1-204ENST00000562118 WNT3P56703 355 aa12.44□□□□□ -0.42
CDH1-204ENST00000562118 IRX1P78414 480 aaPredicted RBP12.44□□□□□ -0.42
CDH1-204ENST00000562118 KLRB1Q12918 225 aa12.44□□□□□ -0.42
CDH1-204ENST00000562118 TUBA3CQ13748 450 aa12.44□□□□□ -0.42
CDH1-204ENST00000562118 ZNF267Q14586 743 aaPredicted RBP12.44□□□□□ -0.42
CDH1-204ENST00000562118 DPY19L1Q2PZI1 675 aa12.44□□□□□ -0.42
CDH1-204ENST00000562118 LSM12Q3MHD2 195 aaKnown RBP12.44□□□□□ -0.42
CDH1-204ENST00000562118 TRMT12Q53H54 448 aaKnown RBP12.44□□□□□ -0.42
CDH1-204ENST00000562118 PIGGQ5H8A4 983 aa12.44□□□□□ -0.42
CDH1-204ENST00000562118 ABHD17BQ5VST6 288 aa12.44□□□□□ -0.42
CDH1-204ENST00000562118 RPUSD3Q6P087 351 aaKnown RBP12.44□□□□□ -0.42
CDH1-204ENST00000562118 TUBA3EQ6PEY2 450 aa12.44□□□□□ -0.42
CDH1-204ENST00000562118 FAM111BQ6SJ93 734 aa12.44□□□□□ -0.42
CDH1-204ENST00000562118 RNF111Q6ZNA4 994 aa12.44□□□□□ -0.42
CDH1-204ENST00000562118 GPALPP1Q8IXQ4 340 aa12.44□□□□□ -0.42
CDH1-204ENST00000562118 CCDC116Q8IYX3 515 aa12.44□□□□□ -0.42
CDH1-204ENST00000562118 SLC15A4Q8N697 577 aa12.44□□□□□ -0.42
CDH1-204ENST00000562118 KRTCAP2Q8N6L1 136 aa12.44□□□□□ -0.42
CDH1-204ENST00000562118 SIMC1Q8NDZ2 872 aa12.44□□□□□ -0.42
CDH1-204ENST00000562118 OR7G2Q8NG99 324 aa12.44□□□□□ -0.42
CDH1-204ENST00000562118 OR5L2Q8NGL0 311 aa12.44□□□□□ -0.42
CDH1-204ENST00000562118 OR9A2Q8NGT5 310 aa12.44□□□□□ -0.42
CDH1-204ENST00000562118 CEP70Q8NHQ1 597 aa12.44□□□□□ -0.42
CDH1-204ENST00000562118 C16orf52Q8NHV5 167 aa12.44□□□□□ -0.42
CDH1-204ENST00000562118 PPCDCQ96CD2 204 aa12.44□□□□□ -0.42
CDH1-204ENST00000562118 NTNG2Q96CW9 530 aa12.44□□□□□ -0.42
CDH1-204ENST00000562118 PPP1R36Q96LQ0 422 aa12.44□□□□□ -0.42
CDH1-204ENST00000562118 ZNF317Q96PQ6 595 aaPredicted RBP12.44□□□□□ -0.42
CDH1-204ENST00000562118 BTBD9Q96Q07 612 aa12.44□□□□□ -0.42
CDH1-204ENST00000562118 BARD1Q99728 777 aaKnown RBP12.44□□□□□ -0.42
CDH1-204ENST00000562118 CCDC28BQ9BUN5 200 aa12.44□□□□□ -0.42
CDH1-204ENST00000562118 BHLHE41Q9C0J9 482 aaPredicted RBP12.44□□□□□ -0.42
CDH1-204ENST00000562118 OR10A5Q9H207 317 aa12.44□□□□□ -0.42
CDH1-204ENST00000562118 CDCP1Q9H5V8 836 aa12.44□□□□□ -0.42
CDH1-204ENST00000562118 SDR39U1Q9NRG7 319 aaPredicted RBP12.44□□□□□ -0.42
CDH1-204ENST00000562118 SIRT3Q9NTG7 399 aaPredicted RBP12.44□□□□□ -0.42
CDH1-204ENST00000562118 GIMAP4Q9NUV9 329 aa12.44□□□□□ -0.42
CDH1-204ENST00000562118 FAM53CQ9NYF3 392 aa12.44□□□□□ -0.42
CDH1-204ENST00000562118 ANAPC2Q9UJX6 822 aa12.44□□□□□ -0.42
CDH1-204ENST00000562118 RALYQ9UKM9 306 aaKnown RBP12.44□□□□□ -0.42
CDH1-204ENST00000562118 B3GNT3Q9Y2A9 372 aa12.44□□□□□ -0.42
CDH1-204ENST00000562118 YARS2Q9Y2Z4 477 aaKnown RBP12.44□□□□□ -0.42
CDH1-204ENST00000562118 PCDHGA10Q9Y5H3 936 aa12.44□□□□□ -0.42
CDH1-204ENST00000562118 SHANK1Q9Y566 2161 aa12.43□□□□□ -0.42
CDH1-204ENST00000562118 OR5H15A6NDH6 313 aa12.43□□□□□ -0.42
CDH1-204ENST00000562118 TCP11X1B4DZS4 312 aa12.43□□□□□ -0.42
CDH1-204ENST00000562118 TO15178 435 aa12.43□□□□□ -0.42
CDH1-204ENST00000562118 SUV39H1O43463 412 aa12.43□□□□□ -0.42
CDH1-204ENST00000562118 ITGA10O75578 1167 aa12.43□□□□□ -0.42
CDH1-204ENST00000562118 LRATO95237 230 aa12.43□□□□□ -0.42
CDH1-204ENST00000562118 LAMP1P11279 417 aa12.43□□□□□ -0.42
CDH1-204ENST00000562118 IDO1P14902 403 aa12.43□□□□□ -0.42
CDH1-204ENST00000562118 NT5EP21589 574 aa12.43□□□□□ -0.42
CDH1-204ENST00000562118 GPX3P22352 226 aa12.43□□□□□ -0.42
CDH1-204ENST00000562118 NTSP30990 170 aa12.43□□□□□ -0.42
CDH1-204ENST00000562118 MDH1P40925 334 aaKnown RBP12.43□□□□□ -0.42
CDH1-204ENST00000562118 GSTA3Q16772 222 aa12.43□□□□□ -0.42
CDH1-204ENST00000562118 PDCD4Q53EL6 469 aaKnown RBP12.43□□□□□ -0.42
CDH1-204ENST00000562118 ZNF468Q5VIY5 522 aaPredicted RBP12.43□□□□□ -0.42
CDH1-204ENST00000562118 FCRLBQ6BAA4 426 aa12.43□□□□□ -0.42
CDH1-204ENST00000562118 ANKRD26P1Q6NSI1 321 aa12.43□□□□□ -0.42
CDH1-204ENST00000562118 CGB2Q6NT52 195 aa12.43□□□□□ -0.42
CDH1-204ENST00000562118 LINC00696Q6ZRV3 163 aa12.43□□□□□ -0.42
CDH1-204ENST00000562118 FAM47EQ6ZV65 393 aa12.43□□□□□ -0.42
CDH1-204ENST00000562118 ZADH2Q8N4Q0 377 aa12.43□□□□□ -0.42
CDH1-204ENST00000562118 OR7A2PQ8NGA2 310 aa12.43□□□□□ -0.42
CDH1-204ENST00000562118 CDC26Q8NHZ8 85 aa12.43□□□□□ -0.42
CDH1-204ENST00000562118 GFM2Q969S9 779 aaKnown RBP12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms