RNA–Protein interactions for RNA: ENST00000561395.5

TPM1-231, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 673 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-231ENST00000561395 PCGF2P35227 344 aa7.07□□□□□ -1.28
TPM1-231ENST00000561395 PPM1FP49593 454 aaPredicted RBP7.07□□□□□ -1.28
TPM1-231ENST00000561395 CDK9P50750 372 aaKnown RBP7.07□□□□□ -1.28
TPM1-231ENST00000561395 NCBP2P52298 156 aaKnown RBP eCLIP7.07□□□□□ -1.28
TPM1-231ENST00000561395 LIM2P55344 173 aa7.07□□□□□ -1.28
TPM1-231ENST00000561395 TLE1Q04724 770 aa7.07□□□□□ -1.28
TPM1-231ENST00000561395 HSPB3Q12988 150 aa7.07□□□□□ -1.28
TPM1-231ENST00000561395 RUNX2Q13950 521 aa7.07□□□□□ -1.28
TPM1-231ENST00000561395 NR0B2Q15466 257 aa7.07□□□□□ -1.28
TPM1-231ENST00000561395 TRIP10Q15642 601 aa7.07□□□□□ -1.28
TPM1-231ENST00000561395 CEBPEQ15744 281 aa7.07□□□□□ -1.28
TPM1-231ENST00000561395 TBCELQ5QJ74 424 aa7.07□□□□□ -1.28
TPM1-231ENST00000561395 COX20Q5RI15 118 aa7.07□□□□□ -1.28
TPM1-231ENST00000561395 OR52E8Q6IFG1 317 aa7.07□□□□□ -1.28
TPM1-231ENST00000561395 WDR74Q6RFH5 385 aaPredicted RBP7.07□□□□□ -1.28
TPM1-231ENST00000561395 PRSS41Q7RTY9 318 aa7.07□□□□□ -1.28
TPM1-231ENST00000561395 SPRED1Q7Z699 444 aa7.07□□□□□ -1.28
TPM1-231ENST00000561395 RNF130Q86XS8 419 aa7.07□□□□□ -1.28
TPM1-231ENST00000561395 PLXDC1Q8IUK5 500 aa7.07□□□□□ -1.28
TPM1-231ENST00000561395 KBTBD2Q8IY47 623 aa7.07□□□□□ -1.28
TPM1-231ENST00000561395 ZSCAN1Q8NBB4 408 aa7.07□□□□□ -1.28
TPM1-231ENST00000561395 OR6C4Q8NGE1 309 aa7.07□□□□□ -1.28
TPM1-231ENST00000561395 ZFP28Q8NHY6 868 aa7.07□□□□□ -1.28
TPM1-231ENST00000561395 SFXN5Q8TD22 340 aa7.07□□□□□ -1.28
TPM1-231ENST00000561395 LRTOMTQ8WZ04 291 aa7.07□□□□□ -1.28
TPM1-231ENST00000561395 POP5Q969H6 163 aaKnown RBP7.07□□□□□ -1.28
TPM1-231ENST00000561395 CCDC74AQ96AQ1 378 aa7.07□□□□□ -1.28
TPM1-231ENST00000561395 AHCYL2Q96HN2 611 aaKnown RBP7.07□□□□□ -1.28
TPM1-231ENST00000561395 C10orf90Q96M02 699 aa7.07□□□□□ -1.28
TPM1-231ENST00000561395 ZNF681Q96N22 645 aa7.07□□□□□ -1.28
TPM1-231ENST00000561395 BBS4Q96RK4 519 aa7.07□□□□□ -1.28
TPM1-231ENST00000561395 CSF3RQ99062 836 aa7.07□□□□□ -1.28
TPM1-231ENST00000561395 DPH2Q9BQC3 489 aaPredicted RBP7.07□□□□□ -1.28
TPM1-231ENST00000561395 NPLQ9BXD5 320 aaPredicted RBP7.07□□□□□ -1.28
TPM1-231ENST00000561395 VCX3BQ9H321 246 aa7.07□□□□□ -1.28
TPM1-231ENST00000561395 POLR1BQ9H9Y6 1135 aa7.07□□□□□ -1.28
TPM1-231ENST00000561395 PDE7BQ9NP56 450 aa7.07□□□□□ -1.28
TPM1-231ENST00000561395 AGPAT4Q9NRZ5 378 aa7.07□□□□□ -1.28
TPM1-231ENST00000561395 GIMAP4Q9NUV9 329 aa7.07□□□□□ -1.28
TPM1-231ENST00000561395 DCAF13Q9NV06 445 aaKnown RBP7.07□□□□□ -1.28
TPM1-231ENST00000561395 SOHLH2Q9NX45 425 aa7.07□□□□□ -1.28
TPM1-231ENST00000561395 MS4A12Q9NXJ0 267 aa7.07□□□□□ -1.28
TPM1-231ENST00000561395 DAPP1Q9UN19 280 aa7.07□□□□□ -1.28
TPM1-231ENST00000561395 PLCL2Q9UPR0 1127 aa7.07□□□□□ -1.28
TPM1-231ENST00000561395 AURKCQ9UQB9 309 aa7.07□□□□□ -1.28
TPM1-231ENST00000561395 C15orf41Q9Y2V0 281 aa7.07□□□□□ -1.28
TPM1-231ENST00000561395 NAALAD2Q9Y3Q0 740 aa7.07□□□□□ -1.28
TPM1-231ENST00000561395 SNX8Q9Y5X2 465 aa7.07□□□□□ -1.28
TPM1-231ENST00000561395 U3KQA8 63 aa7.07□□□□□ -1.28
TPM1-231ENST00000561395 CENPEQ02224 2701 aa7.07□□□□□ -1.28
TPM1-231ENST00000561395 LRBAP50851 2863 aa7.06□□□□□ -1.28
TPM1-231ENST00000561395 FITM1A5D6W6 292 aa7.06□□□□□ -1.28
TPM1-231ENST00000561395 WASHC1A8K0Z3 465 aa7.06□□□□□ -1.28
TPM1-231ENST00000561395 HNRNPRO43390 633 aaKnown RBP7.06□□□□□ -1.28
TPM1-231ENST00000561395 B4GAT1O43505 415 aa7.06□□□□□ -1.28
TPM1-231ENST00000561395 SIGLEC6O43699 453 aa7.06□□□□□ -1.28
TPM1-231ENST00000561395 PEX1O43933 1283 aa7.06□□□□□ -1.28
TPM1-231ENST00000561395 B4GALT2O60909 372 aa7.06□□□□□ -1.28
TPM1-231ENST00000561395 CSO75390 466 aaKnown RBP7.06□□□□□ -1.28
TPM1-231ENST00000561395 ERAL1O75616 437 aaKnown RBP7.06□□□□□ -1.28
TPM1-231ENST00000561395 SERPINA1P01009 418 aa7.06□□□□□ -1.28
TPM1-231ENST00000561395 FCGR1AP12314 374 aa7.06□□□□□ -1.28
TPM1-231ENST00000561395 BMP2P12643 396 aa7.06□□□□□ -1.28
TPM1-231ENST00000561395 HOXB6P17509 224 aaKnown RBP7.06□□□□□ -1.28
TPM1-231ENST00000561395 CSNK2A2P19784 350 aaPredicted RBP7.06□□□□□ -1.28
TPM1-231ENST00000561395 CD1CP29017 333 aa7.06□□□□□ -1.28
TPM1-231ENST00000561395 TLX1P31314 330 aaPredicted RBP7.06□□□□□ -1.28
TPM1-231ENST00000561395 CRATP43155 626 aa7.06□□□□□ -1.28
TPM1-231ENST00000561395 OLR1P78380 273 aa7.06□□□□□ -1.28
TPM1-231ENST00000561395 EEF1A2Q05639 463 aaKnown RBP7.06□□□□□ -1.28
TPM1-231ENST00000561395 DUSP2Q05923 314 aa7.06□□□□□ -1.28
TPM1-231ENST00000561395 RBBP4Q09028 425 aa7.06□□□□□ -1.28
TPM1-231ENST00000561395 VEZF1Q14119 521 aa7.06□□□□□ -1.28
TPM1-231ENST00000561395 SPIDRQ14159 915 aa7.06□□□□□ -1.28
TPM1-231ENST00000561395 C16orf72Q14CZ0 275 aa7.06□□□□□ -1.28
TPM1-231ENST00000561395 NKG7Q16617 165 aa7.06□□□□□ -1.28
TPM1-231ENST00000561395 NDUFA9Q16795 377 aa7.06□□□□□ -1.28
TPM1-231ENST00000561395 ZNF750Q32MQ0 723 aa7.06□□□□□ -1.28
TPM1-231ENST00000561395 LINC00303Q3SY05 128 aa7.06□□□□□ -1.28
TPM1-231ENST00000561395 AMZ1Q400G9 498 aa7.06□□□□□ -1.28
TPM1-231ENST00000561395 SPDYE7PQ495Y7 208 aa7.06□□□□□ -1.28
TPM1-231ENST00000561395 C3orf38Q5JPI3 329 aa7.06□□□□□ -1.28
TPM1-231ENST00000561395 TCTE1Q5JU00 501 aa7.06□□□□□ -1.28
TPM1-231ENST00000561395 GCNT6Q5T4J0 391 aa7.06□□□□□ -1.28
TPM1-231ENST00000561395 GARNL3Q5VVW2 1013 aa7.06□□□□□ -1.28
TPM1-231ENST00000561395 CDCP2Q5VXM1 449 aa7.06□□□□□ -1.28
TPM1-231ENST00000561395 LPCAT4Q643R3 524 aa7.06□□□□□ -1.28
TPM1-231ENST00000561395 HMBOX1Q6NT76 420 aa7.06□□□□□ -1.28
TPM1-231ENST00000561395 GUSBP11Q6P575 273 aa7.06□□□□□ -1.28
TPM1-231ENST00000561395 ENPP6Q6UWR7 440 aa7.06□□□□□ -1.28
TPM1-231ENST00000561395 ANGPTL8Q6UXH0 198 aa7.06□□□□□ -1.28
TPM1-231ENST00000561395 TMEM64Q6YI46 380 aa7.06□□□□□ -1.28
TPM1-231ENST00000561395 PRSS42Q7Z5A4 293 aa7.06□□□□□ -1.28
TPM1-231ENST00000561395 SAMD14Q8IZD0 417 aaPredicted RBP7.06□□□□□ -1.28
TPM1-231ENST00000561395 EID3Q8N140 333 aa7.06□□□□□ -1.28
TPM1-231ENST00000561395 CA13Q8N1Q1 262 aa7.06□□□□□ -1.28
TPM1-231ENST00000561395 Q8N9G6 341 aaPredicted RBP7.06□□□□□ -1.28
TPM1-231ENST00000561395 C11orf65Q8NCR3 313 aa7.06□□□□□ -1.28
TPM1-231ENST00000561395 OR5T3Q8NGG3 340 aa7.06□□□□□ -1.28
TPM1-231ENST00000561395 SUN3Q8TAQ9 357 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms