RNA–Protein interactions for RNA: ENST00000560983.1

HERC1-211, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-211ENST00000560983 LSM8O95777 96 aaKnown RBP3.39□□□□□ -1.87
HERC1-211ENST00000560983 SOD3P08294 240 aa3.39□□□□□ -1.87
HERC1-211ENST00000560983 DANCRP0C864 163 aa3.39□□□□□ -1.87
HERC1-211ENST00000560983 CCDC166P0CW27 439 aa3.39□□□□□ -1.87
HERC1-211ENST00000560983 SYT1P21579 422 aa3.39□□□□□ -1.87
HERC1-211ENST00000560983 ACADLP28330 430 aa3.39□□□□□ -1.87
HERC1-211ENST00000560983 CCKARP32238 428 aa3.39□□□□□ -1.87
HERC1-211ENST00000560983 KCNJ5P48544 419 aa3.39□□□□□ -1.87
HERC1-211ENST00000560983 MTTPP55157 894 aa3.39□□□□□ -1.87
HERC1-211ENST00000560983 CDH6P55285 790 aa3.39□□□□□ -1.87
HERC1-211ENST00000560983 SLC26A5P58743 744 aa3.39□□□□□ -1.87
HERC1-211ENST00000560983 RPL7AP62424 266 aaKnown RBP3.39□□□□□ -1.87
HERC1-211ENST00000560983 RAB1AP62820 205 aa3.39□□□□□ -1.87
HERC1-211ENST00000560983 OGDHQ02218 1023 aa3.39□□□□□ -1.87
HERC1-211ENST00000560983 AP1B1Q10567 949 aa3.39□□□□□ -1.87
HERC1-211ENST00000560983 BECN1Q14457 450 aa3.39□□□□□ -1.87
HERC1-211ENST00000560983 RBMS2Q15434 407 aaKnown RBP3.39□□□□□ -1.87
HERC1-211ENST00000560983 SIX1Q15475 284 aaPredicted RBP3.39□□□□□ -1.87
HERC1-211ENST00000560983 TYSND1Q2T9J0 566 aa3.39□□□□□ -1.87
HERC1-211ENST00000560983 C4orf46Q504U0 113 aa3.39□□□□□ -1.87
HERC1-211ENST00000560983 COBLL1Q53SF7 1204 aa3.39□□□□□ -1.87
HERC1-211ENST00000560983 FAM182AQ5T1J6 154 aa3.39□□□□□ -1.87
HERC1-211ENST00000560983 NDUFAF5Q5TEU4 345 aa3.39□□□□□ -1.87
HERC1-211ENST00000560983 TAF3Q5VWG9 929 aa3.39□□□□□ -1.87
HERC1-211ENST00000560983 RUSC1-AS1Q66K80 236 aa3.39□□□□□ -1.87
HERC1-211ENST00000560983 PAPD4Q6PIY7 484 aaKnown RBP3.39□□□□□ -1.87
HERC1-211ENST00000560983 CYP4V2Q6ZWL3 525 aaPredicted RBP3.39□□□□□ -1.87
HERC1-211ENST00000560983 LUZP2Q86TE4 346 aa3.39□□□□□ -1.87
HERC1-211ENST00000560983 SLC22A16Q86VW1 577 aa3.39□□□□□ -1.87
HERC1-211ENST00000560983 LACC1Q8IV20 430 aa3.39□□□□□ -1.87
HERC1-211ENST00000560983 CNGA4Q8IV77 575 aa3.39□□□□□ -1.87
HERC1-211ENST00000560983 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP3.39□□□□□ -1.87
HERC1-211ENST00000560983 FBXW8Q8N3Y1 598 aa3.39□□□□□ -1.87
HERC1-211ENST00000560983 NANOGP1Q8N7R0 232 aa3.39□□□□□ -1.87
HERC1-211ENST00000560983 ZNF441Q8N8Z8 693 aa3.39□□□□□ -1.87
HERC1-211ENST00000560983 LILRB1Q8NHL6 650 aaPredicted RBP3.39□□□□□ -1.87
HERC1-211ENST00000560983 FAM216AQ8WUB2 273 aa3.39□□□□□ -1.87
HERC1-211ENST00000560983 ZUFSPQ96AP4 578 aa3.39□□□□□ -1.87
HERC1-211ENST00000560983 NTNG2Q96CW9 530 aa3.39□□□□□ -1.87
HERC1-211ENST00000560983 MMABQ96EY8 250 aaPredicted RBP3.39□□□□□ -1.87
HERC1-211ENST00000560983 FAM81BQ96LP2 452 aa3.39□□□□□ -1.87
HERC1-211ENST00000560983 FYTTD1Q96QD9 318 aaKnown RBP3.39□□□□□ -1.87
HERC1-211ENST00000560983 PEBP4Q96S96 227 aa3.39□□□□□ -1.87
HERC1-211ENST00000560983 TMEM204Q9BSN7 226 aa3.39□□□□□ -1.87
HERC1-211ENST00000560983 CRACR2AQ9BSW2 395 aa3.39□□□□□ -1.87
HERC1-211ENST00000560983 DHX35Q9H5Z1 703 aaKnown RBP3.39□□□□□ -1.87
HERC1-211ENST00000560983 COG4Q9H9E3 785 aa3.39□□□□□ -1.87
HERC1-211ENST00000560983 SMURF2Q9HAU4 748 aa3.39□□□□□ -1.87
HERC1-211ENST00000560983 SIX2Q9NPC8 291 aa3.39□□□□□ -1.87
HERC1-211ENST00000560983 NLRC4Q9NPP4 1024 aa3.39□□□□□ -1.87
HERC1-211ENST00000560983 SEMA4BQ9NPR2 832 aaPredicted RBP3.39□□□□□ -1.87
HERC1-211ENST00000560983 RBM22Q9NW64 420 aaKnown RBP eCLIP3.39□□□□□ -1.879e-12■■■■■ 49.2
HERC1-211ENST00000560983 PLAGL1Q9UM63 463 aa3.39□□□□□ -1.87
HERC1-211ENST00000560983 CDC14AQ9UNH5 594 aa3.39□□□□□ -1.87
HERC1-211ENST00000560983 ZNF711Q9Y462 761 aa3.39□□□□□ -1.87
HERC1-211ENST00000560983 KLK4Q9Y5K2 254 aa3.39□□□□□ -1.87
HERC1-211ENST00000560983 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP3.39□□□□□ -1.87
HERC1-211ENST00000560983 DNAH3Q8TD57 4116 aa3.39□□□□□ -1.87
HERC1-211ENST00000560983 PHF3Q92576 2039 aaKnown RBP3.39□□□□□ -1.87
HERC1-211ENST00000560983 CR1P17927 2039 aa3.38□□□□□ -1.87
HERC1-211ENST00000560983 A0A0A6YYC8 382 aaPredicted RBP3.38□□□□□ -1.87
HERC1-211ENST00000560983 TRGV5A0A0B4J1U4 118 aa3.38□□□□□ -1.87
HERC1-211ENST00000560983 A0A0J9YVX5 310 aa3.38□□□□□ -1.87
HERC1-211ENST00000560983 A0A1B0GVL5 298 aa3.38□□□□□ -1.87
HERC1-211ENST00000560983 MBD3L3A6NE82 208 aaPredicted RBP3.38□□□□□ -1.87
HERC1-211ENST00000560983 CD8B2A6NJW9 211 aa3.38□□□□□ -1.87
HERC1-211ENST00000560983 SLCO1B7G3V0H7 640 aa3.38□□□□□ -1.87
HERC1-211ENST00000560983 G3V3Y1 287 aa3.38□□□□□ -1.87
HERC1-211ENST00000560983 H0YGG7 62 aa3.38□□□□□ -1.87
HERC1-211ENST00000560983 I3L1I5 382 aaPredicted RBP3.38□□□□□ -1.87
HERC1-211ENST00000560983 IFRD1O00458 451 aaPredicted RBP3.38□□□□□ -1.87
HERC1-211ENST00000560983 HS3ST1O14792 307 aa3.38□□□□□ -1.87
HERC1-211ENST00000560983 YEATS4O95619 227 aa3.38□□□□□ -1.87
HERC1-211ENST00000560983 SLC4A1P02730 911 aa3.38□□□□□ -1.87
HERC1-211ENST00000560983 EIF2S1P05198 315 aaKnown RBP3.38□□□□□ -1.87
HERC1-211ENST00000560983 HLA-DQB2P05538 268 aa3.38□□□□□ -1.87
HERC1-211ENST00000560983 CYC1P08574 325 aa3.38□□□□□ -1.87
HERC1-211ENST00000560983 RFPL3SP0C7P2 107 aa3.38□□□□□ -1.87
HERC1-211ENST00000560983 APEHP13798 732 aaKnown RBP3.38□□□□□ -1.87
HERC1-211ENST00000560983 CHRNB2P17787 502 aa3.38□□□□□ -1.87
HERC1-211ENST00000560983 MSH3P20585 1137 aa3.38□□□□□ -1.87
HERC1-211ENST00000560983 CNR1P21554 472 aa3.38□□□□□ -1.87
HERC1-211ENST00000560983 PON1P27169 355 aa3.38□□□□□ -1.87
HERC1-211ENST00000560983 HMGCLP35914 325 aa3.38□□□□□ -1.87
HERC1-211ENST00000560983 CDKN1AP38936 164 aa3.38□□□□□ -1.87
HERC1-211ENST00000560983 PCYT1AP49585 367 aa3.38□□□□□ -1.87
HERC1-211ENST00000560983 AGTR2P50052 363 aa3.38□□□□□ -1.87
HERC1-211ENST00000560983 GSCP56915 257 aaPredicted RBP3.38□□□□□ -1.87
HERC1-211ENST00000560983 STX17P56962 302 aa3.38□□□□□ -1.87
HERC1-211ENST00000560983 TAS2R50P59544 299 aa3.38□□□□□ -1.87
HERC1-211ENST00000560983 ARF3P61204 181 aaPredicted RBP3.38□□□□□ -1.87
HERC1-211ENST00000560983 RPS4XP62701 263 aaKnown RBP3.38□□□□□ -1.87
HERC1-211ENST00000560983 ACTG1P63261 375 aa3.38□□□□□ -1.87
HERC1-211ENST00000560983 RHAGQ02094 409 aa3.38□□□□□ -1.87
HERC1-211ENST00000560983 PLGLB1Q02325 96 aa3.38□□□□□ -1.87
HERC1-211ENST00000560983 LRRC63Q05C16 580 aa3.38□□□□□ -1.87
HERC1-211ENST00000560983 ACTN3Q08043 901 aaPredicted RBP3.38□□□□□ -1.87
HERC1-211ENST00000560983 GRB7Q14451 532 aa3.38□□□□□ -1.87
HERC1-211ENST00000560983 HKDC1Q2TB90 917 aa3.38□□□□□ -1.87
HERC1-211ENST00000560983 P3H1Q32P28 736 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms