RNA–Protein interactions for RNA: ENST00000559996.1

HERC1-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 443 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-206ENST00000559996 KAT2AQ92830 837 aa8.75□□□□□ -1.01
HERC1-206ENST00000559996 GATA6Q92908 595 aa8.75□□□□□ -1.01
HERC1-206ENST00000559996 LRRC58Q96CX6 371 aa8.75□□□□□ -1.01
HERC1-206ENST00000559996 FAM120BQ96EK7 910 aaKnown RBP8.75□□□□□ -1.01
HERC1-206ENST00000559996 ZBED6CLQ96FA7 236 aaPredicted RBP8.75□□□□□ -1.01
HERC1-206ENST00000559996 ITCHQ96J02 903 aa8.75□□□□□ -1.01
HERC1-206ENST00000559996 BBS4Q96RK4 519 aa8.75□□□□□ -1.01
HERC1-206ENST00000559996 CGREF1Q99674 301 aa8.75□□□□□ -1.01
HERC1-206ENST00000559996 SLC39A3Q9BRY0 314 aa8.75□□□□□ -1.01
HERC1-206ENST00000559996 GPR87Q9BY21 358 aa8.75□□□□□ -1.01
HERC1-206ENST00000559996 TRIM8Q9BZR9 551 aa8.75□□□□□ -1.01
HERC1-206ENST00000559996 FAM117AQ9C073 453 aa8.75□□□□□ -1.01
HERC1-206ENST00000559996 C1orf21Q9H246 121 aa8.75□□□□□ -1.01
HERC1-206ENST00000559996 SERHL2Q9H4I8 314 aa8.75□□□□□ -1.01
HERC1-206ENST00000559996 NANOGQ9H9S0 305 aa8.75□□□□□ -1.01
HERC1-206ENST00000559996 EFCAB1Q9HAE3 211 aa8.75□□□□□ -1.01
HERC1-206ENST00000559996 THSD1Q9NS62 852 aa8.75□□□□□ -1.01
HERC1-206ENST00000559996 GMPR2Q9P2T1 348 aaKnown RBP8.75□□□□□ -1.01
HERC1-206ENST00000559996 ZNF223Q9UK11 482 aaPredicted RBP8.75□□□□□ -1.01
HERC1-206ENST00000559996 NXT1Q9UKK6 140 aaKnown RBP8.75□□□□□ -1.01
HERC1-206ENST00000559996 PTRH2Q9Y3E5 179 aaKnown RBP8.75□□□□□ -1.01
HERC1-206ENST00000559996 HS3ST3B1Q9Y662 390 aa8.75□□□□□ -1.01
HERC1-206ENST00000559996 AK5Q9Y6K8 562 aa8.75□□□□□ -1.01
HERC1-206ENST00000559996 ZNF780BQ9Y6R6 833 aa8.75□□□□□ -1.01
HERC1-206ENST00000559996 A0A087WV62 115 aa8.74□□□□□ -1.01
HERC1-206ENST00000559996 A8MUA0 341 aa8.74□□□□□ -1.01
HERC1-206ENST00000559996 C21orf140B9A014 251 aa8.74□□□□□ -1.01
HERC1-206ENST00000559996 MASP2O00187 686 aa8.74□□□□□ -1.01
HERC1-206ENST00000559996 EBAG9O00559 213 aa8.74□□□□□ -1.01
HERC1-206ENST00000559996 RFXANKO14593 260 aa8.74□□□□□ -1.01
HERC1-206ENST00000559996 ERN1O75460 977 aaKnown RBP8.74□□□□□ -1.01
HERC1-206ENST00000559996 NPPAP01160 153 aa8.74□□□□□ -1.01
HERC1-206ENST00000559996 IFI6P09912 130 aa8.74□□□□□ -1.01
HERC1-206ENST00000559996 LIPCP11150 499 aa8.74□□□□□ -1.01
HERC1-206ENST00000559996 ESRRAP11474 423 aaPredicted RBP8.74□□□□□ -1.01
HERC1-206ENST00000559996 MMP11P24347 488 aa8.74□□□□□ -1.01
HERC1-206ENST00000559996 DLSTP36957 453 aa8.74□□□□□ -1.01
HERC1-206ENST00000559996 MC3RP41968 323 aa8.74□□□□□ -1.01
HERC1-206ENST00000559996 MAN2A2P49641 1150 aa8.74□□□□□ -1.01
HERC1-206ENST00000559996 EMDP50402 254 aa8.74□□□□□ -1.01
HERC1-206ENST00000559996 NCALDP61601 193 aa8.74□□□□□ -1.01
HERC1-206ENST00000559996 LRRC74AQ0VAA2 488 aa8.74□□□□□ -1.01
HERC1-206ENST00000559996 STX4Q12846 297 aa8.74□□□□□ -1.01
HERC1-206ENST00000559996 HSPB3Q12988 150 aa8.74□□□□□ -1.01
HERC1-206ENST00000559996 IL10RAQ13651 578 aa8.74□□□□□ -1.01
HERC1-206ENST00000559996 CAPRIN1Q14444 709 aaKnown RBP8.74□□□□□ -1.01
HERC1-206ENST00000559996 SFT2D3Q587I9 215 aa8.74□□□□□ -1.01
HERC1-206ENST00000559996 SAXO2Q658L1 398 aa8.74□□□□□ -1.01
HERC1-206ENST00000559996 TMEM107Q6UX40 140 aa8.74□□□□□ -1.01
HERC1-206ENST00000559996 ASRGL1Q7L266 308 aa8.74□□□□□ -1.01
HERC1-206ENST00000559996 CPEB2Q7Z5Q1 589 aaKnown RBP8.74□□□□□ -1.01
HERC1-206ENST00000559996 PPP1R32Q7Z5V6 425 aa8.74□□□□□ -1.01
HERC1-206ENST00000559996 SLC15A3Q8IY34 581 aa8.74□□□□□ -1.01
HERC1-206ENST00000559996 SAMD14Q8IZD0 417 aaPredicted RBP8.74□□□□□ -1.01
HERC1-206ENST00000559996 APCDD1LQ8NCL9 501 aa8.74□□□□□ -1.01
HERC1-206ENST00000559996 VPS37AQ8NEZ2 397 aa8.74□□□□□ -1.01
HERC1-206ENST00000559996 OR4A15Q8NGL6 344 aa8.74□□□□□ -1.01
HERC1-206ENST00000559996 TMEM125Q96AQ2 219 aa8.74□□□□□ -1.01
HERC1-206ENST00000559996 ROPN1LQ96C74 230 aa8.74□□□□□ -1.01
HERC1-206ENST00000559996 C8orf44Q96CB5 159 aa8.74□□□□□ -1.01
HERC1-206ENST00000559996 AURKBQ96GD4 344 aaPredicted RBP8.74□□□□□ -1.01
HERC1-206ENST00000559996 RBM18Q96H35 190 aaKnown RBP8.74□□□□□ -1.01
HERC1-206ENST00000559996 SENP5Q96HI0 755 aaPredicted RBP8.74□□□□□ -1.01
HERC1-206ENST00000559996 IMMP1LQ96LU5 166 aa8.74□□□□□ -1.01
HERC1-206ENST00000559996 ANKRD27Q96NW4 1050 aa8.74□□□□□ -1.01
HERC1-206ENST00000559996 PANX1Q96RD7 426 aa8.74□□□□□ -1.01
HERC1-206ENST00000559996 TUBB6Q9BUF5 446 aa8.74□□□□□ -1.01
HERC1-206ENST00000559996 CRB3Q9BUF7 120 aa8.74□□□□□ -1.01
HERC1-206ENST00000559996 SEMA4CQ9C0C4 833 aa8.74□□□□□ -1.01
HERC1-206ENST00000559996 RMND5AQ9H871 391 aa8.74□□□□□ -1.01
HERC1-206ENST00000559996 IL1RL2Q9HB29 575 aa8.74□□□□□ -1.01
HERC1-206ENST00000559996 PNO1Q9NRX1 252 aaKnown RBP8.74□□□□□ -1.01
HERC1-206ENST00000559996 SEMA3GQ9NS98 782 aa8.74□□□□□ -1.01
HERC1-206ENST00000559996 CMTM6Q9NX76 183 aa8.74□□□□□ -1.01
HERC1-206ENST00000559996 DKK4Q9UBT3 224 aa8.74□□□□□ -1.01
HERC1-206ENST00000559996 GPN3Q9UHW5 284 aaPredicted RBP8.74□□□□□ -1.01
HERC1-206ENST00000559996 C19orf53Q9UNZ5 99 aaPredicted RBP8.74□□□□□ -1.01
HERC1-206ENST00000559996 ENTPD4Q9Y227 616 aa8.74□□□□□ -1.01
HERC1-206ENST00000559996 DTX4Q9Y2E6 619 aa8.74□□□□□ -1.01
HERC1-206ENST00000559996 ZFHX4Q86UP3 3567 aa8.73□□□□□ -1.01
HERC1-206ENST00000559996 IGHV1-45A0A0A0MS14 117 aa8.73□□□□□ -1.01
HERC1-206ENST00000559996 PRAMEF27A3QJZ7 478 aa8.73□□□□□ -1.01
HERC1-206ENST00000559996 TMEM200CA6NKL6 621 aa8.73□□□□□ -1.01
HERC1-206ENST00000559996 C17orf105B2RV13 164 aa8.73□□□□□ -1.01
HERC1-206ENST00000559996 C9J4A7 227 aa8.73□□□□□ -1.01
HERC1-206ENST00000559996 ANGPT2O15123 496 aa8.73□□□□□ -1.01
HERC1-206ENST00000559996 EMC8O43402 210 aa8.73□□□□□ -1.01
HERC1-206ENST00000559996 RRP9O43818 475 aaKnown RBP8.73□□□□□ -1.01
HERC1-206ENST00000559996 PRKNO60260 465 aaPredicted RBP8.73□□□□□ -1.01
HERC1-206ENST00000559996 CREG1O75629 220 aa8.73□□□□□ -1.01
HERC1-206ENST00000559996 KCNH1O95259 989 aa8.73□□□□□ -1.01
HERC1-206ENST00000559996 ABCB1P08183 1280 aaPredicted RBP8.73□□□□□ -1.01
HERC1-206ENST00000559996 CD63P08962 238 aa8.73□□□□□ -1.01
HERC1-206ENST00000559996 COX6A1P12074 109 aa8.73□□□□□ -1.01
HERC1-206ENST00000559996 LIFP15018 202 aa8.73□□□□□ -1.01
HERC1-206ENST00000559996 GPX2P18283 190 aa8.73□□□□□ -1.01
HERC1-206ENST00000559996 NT5EP21589 574 aa8.73□□□□□ -1.01
HERC1-206ENST00000559996 UQCRC2P22695 453 aa8.73□□□□□ -1.01
HERC1-206ENST00000559996 NTSP30990 170 aa8.73□□□□□ -1.01
HERC1-206ENST00000559996 SSTR4P31391 388 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms