RNA–Protein interactions for RNA: ENST00000559989.1

CSPG4P12-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P12, Length 7,790 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-202ENST00000559989 ACVR1BP36896 505 aa13.27□□□□□ -0.28
CSPG4P12-202ENST00000559989 GINS1Q14691 196 aa13.27□□□□□ -0.28
CSPG4P12-202ENST00000559989 DUSP7Q16829 419 aa13.27□□□□□ -0.28
CSPG4P12-202ENST00000559989 CCBE1Q6UXH8 406 aaPredicted RBP13.27□□□□□ -0.28
CSPG4P12-202ENST00000559989 GDPD1Q8N9F7 314 aa13.27□□□□□ -0.28
CSPG4P12-202ENST00000559989 KLK6Q92876 244 aa13.27□□□□□ -0.28
CSPG4P12-202ENST00000559989 ACBD6Q9BR61 282 aa13.27□□□□□ -0.28
CSPG4P12-202ENST00000559989 NMNAT2Q9BZQ4 307 aa13.27□□□□□ -0.28
CSPG4P12-202ENST00000559989 PITHD1Q9GZP4 211 aaPredicted RBP13.27□□□□□ -0.28
CSPG4P12-202ENST00000559989 GPN2Q9H9Y4 310 aaPredicted RBP13.27□□□□□ -0.28
CSPG4P12-202ENST00000559989 NEXMIFQ5QGS0 1516 aa13.27□□□□□ -0.28
CSPG4P12-202ENST00000559989 PRAMEF2O60811 474 aa13.27□□□□□ -0.28
CSPG4P12-202ENST00000559989 PRAF2O60831 178 aa13.27□□□□□ -0.28
CSPG4P12-202ENST00000559989 C6orf47O95873 294 aa13.27□□□□□ -0.28
CSPG4P12-202ENST00000559989 TFPTP0C1Z6 253 aa13.27□□□□□ -0.28
CSPG4P12-202ENST00000559989 CPT2P23786 658 aa13.27□□□□□ -0.28
CSPG4P12-202ENST00000559989 IL32P24001 234 aa13.27□□□□□ -0.28
CSPG4P12-202ENST00000559989 DNAJB1P25685 340 aa13.27□□□□□ -0.28
CSPG4P12-202ENST00000559989 HOXD11P31277 338 aaPredicted RBP13.27□□□□□ -0.28
CSPG4P12-202ENST00000559989 ZNF92Q03936 586 aa13.27□□□□□ -0.28
CSPG4P12-202ENST00000559989 PDLIM3Q53GG5 364 aaPredicted RBP13.27□□□□□ -0.28
CSPG4P12-202ENST00000559989 ARSIQ5FYB1 569 aa13.27□□□□□ -0.28
CSPG4P12-202ENST00000559989 FOXR2Q6PJQ5 311 aa13.27□□□□□ -0.28
CSPG4P12-202ENST00000559989 NRROSQ86YC3 692 aa13.27□□□□□ -0.28
CSPG4P12-202ENST00000559989 MCHR1Q99705 422 aa13.27□□□□□ -0.28
CSPG4P12-202ENST00000559989 KCNH6Q9H252 994 aa13.27□□□□□ -0.28
CSPG4P12-202ENST00000559989 SLC6A5Q9Y345 797 aa13.27□□□□□ -0.28
CSPG4P12-202ENST00000559989 SOCS2O14508 198 aa13.27□□□□□ -0.29
CSPG4P12-202ENST00000559989 SYN3O14994 580 aa13.27□□□□□ -0.29
CSPG4P12-202ENST00000559989 TMEM63AO94886 807 aa13.27□□□□□ -0.29
CSPG4P12-202ENST00000559989 CHRNA1P02708 482 aa13.27□□□□□ -0.29
CSPG4P12-202ENST00000559989 RAB7AP51149 207 aa13.27□□□□□ -0.29
CSPG4P12-202ENST00000559989 ZNF585AQ6P3V2 769 aa13.27□□□□□ -0.29
CSPG4P12-202ENST00000559989 ASRGL1Q7L266 308 aa13.27□□□□□ -0.29
CSPG4P12-202ENST00000559989 LINC00116Q8NCU8 138 aa13.27□□□□□ -0.29
CSPG4P12-202ENST00000559989 MMABQ96EY8 250 aaPredicted RBP13.27□□□□□ -0.29
CSPG4P12-202ENST00000559989 TMEM248Q9NWD8 314 aa13.27□□□□□ -0.29
CSPG4P12-202ENST00000559989 TSPAN11A1L157 253 aa13.27□□□□□ -0.29
CSPG4P12-202ENST00000559989 HLA-DOBP13765 273 aa13.27□□□□□ -0.29
CSPG4P12-202ENST00000559989 RPL7P18124 248 aaKnown RBP13.27□□□□□ -0.29
CSPG4P12-202ENST00000559989 PTP4A2Q12974 167 aa13.27□□□□□ -0.29
CSPG4P12-202ENST00000559989 MPPED2Q15777 294 aa13.27□□□□□ -0.29
CSPG4P12-202ENST00000559989 COX15Q7KZN9 410 aa13.27□□□□□ -0.29
CSPG4P12-202ENST00000559989 DTX3Q8N9I9 347 aa13.27□□□□□ -0.29
CSPG4P12-202ENST00000559989 OR4K14Q8NGD5 310 aa13.27□□□□□ -0.29
CSPG4P12-202ENST00000559989 TRUB1Q8WWH5 349 aaKnown RBP13.27□□□□□ -0.29
CSPG4P12-202ENST00000559989 SLC5A11Q8WWX8 675 aa13.27□□□□□ -0.29
CSPG4P12-202ENST00000559989 TMEM74Q96NL1 305 aa13.27□□□□□ -0.29
CSPG4P12-202ENST00000559989 CACNG6Q9BXT2 260 aa13.27□□□□□ -0.29
CSPG4P12-202ENST00000559989 RPS17P08708 135 aaKnown RBP13.27□□□□□ -0.29
CSPG4P12-202ENST00000559989 CSF1P09603 554 aa13.27□□□□□ -0.29
CSPG4P12-202ENST00000559989 AKAIN1P0CW23 69 aa13.27□□□□□ -0.29
CSPG4P12-202ENST00000559989 PMPCAQ10713 525 aa13.27□□□□□ -0.29
CSPG4P12-202ENST00000559989 UBXN2BQ14CS0 331 aa13.27□□□□□ -0.29
CSPG4P12-202ENST00000559989 C9orf131Q5VYM1 1079 aa13.27□□□□□ -0.29
CSPG4P12-202ENST00000559989 ZNF425Q6IV72 752 aa13.27□□□□□ -0.29
CSPG4P12-202ENST00000559989 OR5AK2Q8NH90 309 aa13.27□□□□□ -0.29
CSPG4P12-202ENST00000559989 NKD2Q969F2 451 aaPredicted RBP13.27□□□□□ -0.29
CSPG4P12-202ENST00000559989 PATZ1Q9HBE1 687 aaKnown RBP13.27□□□□□ -0.29
CSPG4P12-202ENST00000559989 KLHL42Q9P2K6 505 aa13.27□□□□□ -0.29
CSPG4P12-202ENST00000559989 MYH1P12882 1939 aa13.27□□□□□ -0.29
CSPG4P12-202ENST00000559989 MYH2Q9UKX2 1941 aa13.27□□□□□ -0.29
CSPG4P12-202ENST00000559989 MYH4Q9Y623 1939 aa13.27□□□□□ -0.29
CSPG4P12-202ENST00000559989 WASH4PA8MWX3 477 aa13.26□□□□□ -0.29
CSPG4P12-202ENST00000559989 RASAL1O95294 804 aa13.26□□□□□ -0.29
CSPG4P12-202ENST00000559989 FHP07954 510 aa13.26□□□□□ -0.29
CSPG4P12-202ENST00000559989 FAM111BQ6SJ93 734 aa13.26□□□□□ -0.29
CSPG4P12-202ENST00000559989 JOSD2Q8TAC2 188 aa13.26□□□□□ -0.29
CSPG4P12-202ENST00000559989 HAPLN3Q96S86 360 aa13.26□□□□□ -0.29
CSPG4P12-202ENST00000559989 FBXW11Q9UKB1 542 aa13.26□□□□□ -0.29
CSPG4P12-202ENST00000559989 PUS1Q9Y606 427 aaKnown RBP eCLIP13.26□□□□□ -0.29
CSPG4P12-202ENST00000559989 ROBO2Q9HCK4 1378 aa13.26□□□□□ -0.29
CSPG4P12-202ENST00000559989 TRAF3IP2O43734 574 aaPredicted RBP13.26□□□□□ -0.29
CSPG4P12-202ENST00000559989 OAS1P00973 400 aaKnown RBP13.26□□□□□ -0.29
CSPG4P12-202ENST00000559989 TMEM225BP0DP42 221 aa13.26□□□□□ -0.29
CSPG4P12-202ENST00000559989 ACP5P13686 325 aa13.26□□□□□ -0.29
CSPG4P12-202ENST00000559989 MMP8P22894 467 aa13.26□□□□□ -0.29
CSPG4P12-202ENST00000559989 HNRNPFP52597 415 aaKnown RBP13.26□□□□□ -0.29
CSPG4P12-202ENST00000559989 GABARAPL2P60520 117 aa13.26□□□□□ -0.29
CSPG4P12-202ENST00000559989 FGFBP1Q14512 234 aa13.26□□□□□ -0.29
CSPG4P12-202ENST00000559989 RBMS3Q6XE24 437 aaKnown RBP13.26□□□□□ -0.29
CSPG4P12-202ENST00000559989 B3GLCTQ6Y288 498 aa13.26□□□□□ -0.29
CSPG4P12-202ENST00000559989 GOLGA7Q7Z5G4 137 aa13.26□□□□□ -0.29
CSPG4P12-202ENST00000559989 CHFRQ96EP1 664 aa13.26□□□□□ -0.29
CSPG4P12-202ENST00000559989 RNF170Q96K19 258 aa13.26□□□□□ -0.29
CSPG4P12-202ENST00000559989 B3GNT5Q9BYG0 378 aa13.26□□□□□ -0.29
CSPG4P12-202ENST00000559989 COQ3Q9NZJ6 369 aa13.26□□□□□ -0.29
CSPG4P12-202ENST00000559989 RNF212BA8MTL3 300 aa13.26□□□□□ -0.29
CSPG4P12-202ENST00000559989 CRTAPO75718 401 aaPredicted RBP13.26□□□□□ -0.29
CSPG4P12-202ENST00000559989 RFC2P35250 354 aa13.26□□□□□ -0.29
CSPG4P12-202ENST00000559989 SCNN1AP37088 669 aa13.26□□□□□ -0.29
CSPG4P12-202ENST00000559989 HSD17B7P56937 341 aa13.26□□□□□ -0.29
CSPG4P12-202ENST00000559989 INHBEP58166 350 aa13.26□□□□□ -0.29
CSPG4P12-202ENST00000559989 HTRA4P83105 476 aaPredicted RBP13.26□□□□□ -0.29
CSPG4P12-202ENST00000559989 MEF2DQ14814 521 aa13.26□□□□□ -0.29
CSPG4P12-202ENST00000559989 TIGD5Q53EQ6 642 aa13.26□□□□□ -0.29
CSPG4P12-202ENST00000559989 PHYHD1Q5SRE7 291 aa13.26□□□□□ -0.29
CSPG4P12-202ENST00000559989 ZNF783Q6ZMS7 281 aa13.26□□□□□ -0.29
CSPG4P12-202ENST00000559989 KLBQ86Z14 1044 aa13.26□□□□□ -0.29
CSPG4P12-202ENST00000559989 OR6T1Q8NGN1 323 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms