RNA–Protein interactions for RNA: ENST00000559754.1

SPG11-218, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 411 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-218ENST00000559754 ALG12Q9BV10 488 aa3.15□□□□□ -1.91
SPG11-218ENST00000559754 TBC1D10AQ9BXI6 508 aa3.15□□□□□ -1.91
SPG11-218ENST00000559754 NUSAP1Q9BXS6 441 aaKnown RBP3.15□□□□□ -1.91
SPG11-218ENST00000559754 CRNKL1Q9BZJ0 848 aaKnown RBP3.15□□□□□ -1.91
SPG11-218ENST00000559754 PKIBQ9C010 78 aa3.15□□□□□ -1.91
SPG11-218ENST00000559754 RAVER2Q9HCJ3 691 aaKnown RBP3.15□□□□□ -1.91
SPG11-218ENST00000559754 A4GALTQ9NPC4 353 aa3.15□□□□□ -1.91
SPG11-218ENST00000559754 CHST11Q9NPF2 352 aa3.15□□□□□ -1.91
SPG11-218ENST00000559754 GLRX2Q9NS18 164 aa3.15□□□□□ -1.91
SPG11-218ENST00000559754 FGF21Q9NSA1 209 aa3.15□□□□□ -1.91
SPG11-218ENST00000559754 BAIAP2L1Q9UHR4 511 aa3.15□□□□□ -1.91
SPG11-218ENST00000559754 FOXJ3Q9UPW0 622 aa3.15□□□□□ -1.91
SPG11-218ENST00000559754 NSG2Q9Y328 171 aa3.15□□□□□ -1.91
SPG11-218ENST00000559754 ZMYM6O95789 1325 aa3.15□□□□□ -1.91
SPG11-218ENST00000559754 UMODL1Q5DID0 1318 aa3.15□□□□□ -1.91
SPG11-218ENST00000559754 PTPRUQ92729 1446 aa3.14□□□□□ -1.91
SPG11-218ENST00000559754 IGKV6D-41A0A0C4DH26 115 aa3.14□□□□□ -1.91
SPG11-218ENST00000559754 ATP6AP2A0A1C7CYW4 349 aa3.14□□□□□ -1.91
SPG11-218ENST00000559754 CCDC162PA2VCL2 907 aa3.14□□□□□ -1.91
SPG11-218ENST00000559754 B4GALT2O60909 372 aa3.14□□□□□ -1.91
SPG11-218ENST00000559754 SNNO75324 88 aaPredicted RBP3.14□□□□□ -1.91
SPG11-218ENST00000559754 ECI2O75521 394 aa3.14□□□□□ -1.91
SPG11-218ENST00000559754 RHBDL1O75783 438 aa3.14□□□□□ -1.91
SPG11-218ENST00000559754 CIB2O75838 187 aa3.14□□□□□ -1.91
SPG11-218ENST00000559754 DUS4LO95620 317 aaKnown RBP3.14□□□□□ -1.91
SPG11-218ENST00000559754 IL1BP01584 269 aa3.14□□□□□ -1.91
SPG11-218ENST00000559754 ASGR1P07306 291 aa3.14□□□□□ -1.91
SPG11-218ENST00000559754 CA3P07451 260 aa3.14□□□□□ -1.91
SPG11-218ENST00000559754 ODC1P11926 461 aa3.14□□□□□ -1.91
SPG11-218ENST00000559754 GALP22466 123 aa3.14□□□□□ -1.91
SPG11-218ENST00000559754 PPP2R1AP30153 589 aa3.14□□□□□ -1.91
SPG11-218ENST00000559754 CSTF2P33240 577 aaKnown RBP eCLIP3.14□□□□□ -1.91
SPG11-218ENST00000559754 ACADVLP49748 655 aa3.14□□□□□ -1.91
SPG11-218ENST00000559754 CCR4P51679 360 aa3.14□□□□□ -1.91
SPG11-218ENST00000559754 NAPAP54920 295 aa3.14□□□□□ -1.91
SPG11-218ENST00000559754 AIF1P55008 147 aa3.14□□□□□ -1.91
SPG11-218ENST00000559754 GEMP55040 296 aa3.14□□□□□ -1.91
SPG11-218ENST00000559754 NLRP11P59045 1033 aaKnown RBP3.14□□□□□ -1.91
SPG11-218ENST00000559754 CBX1P83916 185 aa3.14□□□□□ -1.91
SPG11-218ENST00000559754 TAF10Q12962 218 aa3.14□□□□□ -1.91
SPG11-218ENST00000559754 RIGQ13278 110 aa3.14□□□□□ -1.91
SPG11-218ENST00000559754 OPCMLQ14982 345 aa3.14□□□□□ -1.91
SPG11-218ENST00000559754 ZSWIM7Q19AV6 140 aa3.14□□□□□ -1.91
SPG11-218ENST00000559754 CCDC57Q2TAC2 916 aa3.14□□□□□ -1.91
SPG11-218ENST00000559754 SLC35D3Q5M8T2 416 aa3.14□□□□□ -1.91
SPG11-218ENST00000559754 SEL1L3Q68CR1 1132 aa3.14□□□□□ -1.91
SPG11-218ENST00000559754 SNRNP48Q6IEG0 339 aaKnown RBP3.14□□□□□ -1.91
SPG11-218ENST00000559754 KRTAP5-4Q6L8H1 288 aa3.14□□□□□ -1.91
SPG11-218ENST00000559754 EFL1Q7Z2Z2 1120 aaKnown RBP3.14□□□□□ -1.91
SPG11-218ENST00000559754 COX8CQ7Z4L0 72 aa3.14□□□□□ -1.91
SPG11-218ENST00000559754 HOGA1Q86XE5 327 aa3.14□□□□□ -1.91
SPG11-218ENST00000559754 LACC1Q8IV20 430 aa3.14□□□□□ -1.91
SPG11-218ENST00000559754 GPRC5AQ8NFJ5 357 aa3.14□□□□□ -1.91
SPG11-218ENST00000559754 OR6C4Q8NGE1 309 aa3.14□□□□□ -1.91
SPG11-218ENST00000559754 OR6M1Q8NGM8 313 aa3.14□□□□□ -1.91
SPG11-218ENST00000559754 AKR7LQ8NHP1 331 aa3.14□□□□□ -1.91
SPG11-218ENST00000559754 OLIG1Q8TAK6 271 aa3.14□□□□□ -1.91
SPG11-218ENST00000559754 PHLDA1Q8WV24 401 aaPredicted RBP3.14□□□□□ -1.91
SPG11-218ENST00000559754 NT5C3BQ969T7 300 aa3.14□□□□□ -1.91
SPG11-218ENST00000559754 MCHR2Q969V1 340 aa3.14□□□□□ -1.91
SPG11-218ENST00000559754 AZIN2Q96A70 460 aa3.14□□□□□ -1.91
SPG11-218ENST00000559754 TMEM45BQ96B21 275 aa3.14□□□□□ -1.91
SPG11-218ENST00000559754 TCEANC2Q96MN5 208 aa3.14□□□□□ -1.91
SPG11-218ENST00000559754 CDCA3Q99618 268 aaPredicted RBP3.14□□□□□ -1.91
SPG11-218ENST00000559754 UPF3AQ9H1J1 476 aaKnown RBP3.14□□□□□ -1.91
SPG11-218ENST00000559754 VIPAS39Q9H9C1 493 aa3.14□□□□□ -1.91
SPG11-218ENST00000559754 CRLF2Q9HC73 371 aa3.14□□□□□ -1.91
SPG11-218ENST00000559754 EXOC1Q9NV70 894 aa3.14□□□□□ -1.91
SPG11-218ENST00000559754 HYPKQ9NX55 129 aa3.14□□□□□ -1.91
SPG11-218ENST00000559754 RAB20Q9NX57 234 aa3.14□□□□□ -1.91
SPG11-218ENST00000559754 GDAP2Q9NXN4 497 aa3.14□□□□□ -1.91
SPG11-218ENST00000559754 EPHA6Q9UF33 1036 aa3.14□□□□□ -1.91
SPG11-218ENST00000559754 IL36AQ9UHA7 158 aa3.14□□□□□ -1.91
SPG11-218ENST00000559754 PCSK1NQ9UHG2 260 aa3.14□□□□□ -1.91
SPG11-218ENST00000559754 ZNF490Q9ULM2 529 aaPredicted RBP3.14□□□□□ -1.91
SPG11-218ENST00000559754 NAP1L2Q9ULW6 460 aaPredicted RBP3.14□□□□□ -1.91
SPG11-218ENST00000559754 CLEC4AQ9UMR7 237 aa3.14□□□□□ -1.91
SPG11-218ENST00000559754 STUB1Q9UNE7 303 aa3.14□□□□□ -1.91
SPG11-218ENST00000559754 MRPS33Q9Y291 106 aaKnown RBP3.14□□□□□ -1.91
SPG11-218ENST00000559754 KANK1Q14678 1352 aa3.13□□□□□ -1.91
SPG11-218ENST00000559754 MFSD2BA6NFX1 497 aa3.13□□□□□ -1.91
SPG11-218ENST00000559754 ANKRD61A6NGH8 418 aa3.13□□□□□ -1.91
SPG11-218ENST00000559754 ZNF716A6NP11 495 aa3.13□□□□□ -1.91
SPG11-218ENST00000559754 E9PMD0 336 aa3.13□□□□□ -1.91
SPG11-218ENST00000559754 SGK494L7N484 410 aa3.13□□□□□ -1.91
SPG11-218ENST00000559754 CACNG3O60359 315 aa3.13□□□□□ -1.91
SPG11-218ENST00000559754 TXNDC12O95881 172 aa3.13□□□□□ -1.91
SPG11-218ENST00000559754 ZNF735P0CB33 412 aa3.13□□□□□ -1.91
SPG11-218ENST00000559754 ACADSP16219 412 aa3.13□□□□□ -1.91
SPG11-218ENST00000559754 CDH3P22223 829 aa3.13□□□□□ -1.91
SPG11-218ENST00000559754 CA8P35219 290 aa3.13□□□□□ -1.91
SPG11-218ENST00000559754 RFC4P35249 363 aa3.13□□□□□ -1.91
SPG11-218ENST00000559754 TRIM23P36406 574 aa3.13□□□□□ -1.91
SPG11-218ENST00000559754 PTGFRP43088 359 aa3.13□□□□□ -1.91
SPG11-218ENST00000559754 CEBPDP49716 269 aaPredicted RBP3.13□□□□□ -1.91
SPG11-218ENST00000559754 RGS4P49798 205 aa3.13□□□□□ -1.91
SPG11-218ENST00000559754 PRRX1P54821 245 aa3.13□□□□□ -1.91
SPG11-218ENST00000559754 RPL23AP62750 156 aaKnown RBP3.13□□□□□ -1.91
SPG11-218ENST00000559754 ELAVL2Q12926 359 aaKnown RBP3.13□□□□□ -1.91
SPG11-218ENST00000559754 DRP2Q13474 957 aa3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms