RNA–Protein interactions for RNA: ENST00000559494.1

TSPAN3-207, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,326 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-207ENST00000559494 MAELQ96JY0 434 aaKnown RBP18.82■□□□□ 0.6
TSPAN3-207ENST00000559494 OR10A5Q9H207 317 aa18.82■□□□□ 0.6
TSPAN3-207ENST00000559494 GLIPR2Q9H4G4 154 aa18.82■□□□□ 0.6
TSPAN3-207ENST00000559494 MYOTQ9UBF9 498 aa18.82■□□□□ 0.6
TSPAN3-207ENST00000559494 USH1CQ9Y6N9 552 aa18.82■□□□□ 0.6
TSPAN3-207ENST00000559494 B8ZZF3 427 aa18.81■□□□□ 0.6
TSPAN3-207ENST00000559494 WWP2O00308 870 aa18.81■□□□□ 0.6
TSPAN3-207ENST00000559494 SCAMP2O15127 329 aaKnown RBP18.81■□□□□ 0.6
TSPAN3-207ENST00000559494 ITGA10O75578 1167 aa18.81■□□□□ 0.6
TSPAN3-207ENST00000559494 ALDOCP09972 364 aaKnown RBP18.81■□□□□ 0.6
TSPAN3-207ENST00000559494 TNFSF10P50591 281 aa18.81■□□□□ 0.6
TSPAN3-207ENST00000559494 CLDN8P56748 225 aa18.81■□□□□ 0.6
TSPAN3-207ENST00000559494 DUSP8Q13202 625 aa18.81■□□□□ 0.6
TSPAN3-207ENST00000559494 TUBA3CQ13748 450 aa18.81■□□□□ 0.6
TSPAN3-207ENST00000559494 EXOSC7Q15024 291 aaKnown RBP18.81■□□□□ 0.6
TSPAN3-207ENST00000559494 C6orf163Q5TEZ5 329 aa18.81■□□□□ 0.6
TSPAN3-207ENST00000559494 TUBA3EQ6PEY2 450 aa18.81■□□□□ 0.6
TSPAN3-207ENST00000559494 EPGNQ6UW88 154 aa18.81■□□□□ 0.6
TSPAN3-207ENST00000559494 Q8NA96 180 aa18.81■□□□□ 0.6
TSPAN3-207ENST00000559494 OR7G1Q8NGA0 311 aa18.81■□□□□ 0.6
TSPAN3-207ENST00000559494 OR5L2Q8NGL0 311 aa18.81■□□□□ 0.6
TSPAN3-207ENST00000559494 ZNF675Q8TD23 568 aa18.81■□□□□ 0.6
TSPAN3-207ENST00000559494 PNPLA2Q96AD5 504 aa18.81■□□□□ 0.6
TSPAN3-207ENST00000559494 CIDECQ96AQ7 238 aaPredicted RBP18.81■□□□□ 0.6
TSPAN3-207ENST00000559494 AMDHD1Q96NU7 426 aa18.81■□□□□ 0.6
TSPAN3-207ENST00000559494 ANKRA2Q9H9E1 313 aa18.81■□□□□ 0.6
TSPAN3-207ENST00000559494 SDAD1Q9NVU7 687 aaKnown RBP eCLIP18.81■□□□□ 0.6
TSPAN3-207ENST00000559494 ANKRD10Q9NXR5 420 aa18.81■□□□□ 0.6
TSPAN3-207ENST00000559494 LUZP4Q9P127 313 aa18.81■□□□□ 0.6
TSPAN3-207ENST00000559494 ANAPC2Q9UJX6 822 aa18.81■□□□□ 0.6
TSPAN3-207ENST00000559494 B3GNT3Q9Y2A9 372 aa18.81■□□□□ 0.6
TSPAN3-207ENST00000559494 YARS2Q9Y2Z4 477 aaKnown RBP18.81■□□□□ 0.6
TSPAN3-207ENST00000559494 OR5H15A6NDH6 313 aa18.8■□□□□ 0.6
TSPAN3-207ENST00000559494 OR6C76A6NM76 312 aa18.8■□□□□ 0.6
TSPAN3-207ENST00000559494 SUV39H1O43463 412 aa18.8■□□□□ 0.6
TSPAN3-207ENST00000559494 ZNF354AO60765 605 aaPredicted RBP18.8■□□□□ 0.6
TSPAN3-207ENST00000559494 OR2J2O76002 312 aa18.8■□□□□ 0.6
TSPAN3-207ENST00000559494 CBX7O95931 251 aa18.8■□□□□ 0.6
TSPAN3-207ENST00000559494 NTSP30990 170 aa18.8■□□□□ 0.6
TSPAN3-207ENST00000559494 NCBP2P52298 156 aaKnown RBP eCLIP18.8■□□□□ 0.6
TSPAN3-207ENST00000559494 R3HCC1LQ7Z5L2 792 aaKnown RBP18.8■□□□□ 0.6
TSPAN3-207ENST00000559494 FAM9CQ8IZT9 166 aa18.8■□□□□ 0.6
TSPAN3-207ENST00000559494 NUBPLQ8TB37 319 aa18.8■□□□□ 0.6
TSPAN3-207ENST00000559494 ACTRT2Q8TDY3 377 aa18.8■□□□□ 0.6
TSPAN3-207ENST00000559494 COQ8BQ96D53 544 aa18.8■□□□□ 0.6
TSPAN3-207ENST00000559494 OR52B2Q96RD2 323 aa18.8■□□□□ 0.6
TSPAN3-207ENST00000559494 ABI3Q9P2A4 366 aa18.8■□□□□ 0.6
TSPAN3-207ENST00000559494 NBASA2RRP1 2371 aa18.79■□□□□ 0.6
TSPAN3-207ENST00000559494 TCP11X1B4DZS4 312 aa18.79■□□□□ 0.6
TSPAN3-207ENST00000559494 FCHO1O14526 889 aa18.79■□□□□ 0.6
TSPAN3-207ENST00000559494 ANKRD28O15084 1053 aa18.79■□□□□ 0.6
TSPAN3-207ENST00000559494 PDPK1O15530 556 aa18.79■□□□□ 0.6
TSPAN3-207ENST00000559494 LAMP1P11279 417 aa18.79■□□□□ 0.6
TSPAN3-207ENST00000559494 PRPS1L1P21108 318 aa18.79■□□□□ 0.6
TSPAN3-207ENST00000559494 TRHRP34981 398 aaPredicted RBP18.79■□□□□ 0.6
TSPAN3-207ENST00000559494 HPCAL1P37235 193 aa18.79■□□□□ 0.6
TSPAN3-207ENST00000559494 FRKP42685 505 aaPredicted RBP18.79■□□□□ 0.6
TSPAN3-207ENST00000559494 C21orf58P58505 322 aa18.79■□□□□ 0.6
TSPAN3-207ENST00000559494 EBPQ15125 230 aaKnown RBP18.79■□□□□ 0.6
TSPAN3-207ENST00000559494 TLR1Q15399 786 aa18.79■□□□□ 0.6
TSPAN3-207ENST00000559494 PIGGQ5H8A4 983 aa18.79■□□□□ 0.6
TSPAN3-207ENST00000559494 FHL5Q5TD97 284 aa18.79■□□□□ 0.6
TSPAN3-207ENST00000559494 NXNQ6DKJ4 435 aa18.79■□□□□ 0.6
TSPAN3-207ENST00000559494 SLC29A4Q7RTT9 530 aa18.79■□□□□ 0.6
TSPAN3-207ENST00000559494 ZNF551Q7Z340 670 aaPredicted RBP18.79■□□□□ 0.6
TSPAN3-207ENST00000559494 SPATA19Q7Z5L4 167 aa18.79■□□□□ 0.6
TSPAN3-207ENST00000559494 ZNF227Q86WZ6 799 aa18.79■□□□□ 0.6
TSPAN3-207ENST00000559494 OR7G2Q8NG99 324 aa18.79■□□□□ 0.6
TSPAN3-207ENST00000559494 C16orf52Q8NHV5 167 aa18.79■□□□□ 0.6
TSPAN3-207ENST00000559494 SIGLEC12Q96PQ1 595 aa18.79■□□□□ 0.6
TSPAN3-207ENST00000559494 UTP23Q9BRU9 249 aaKnown RBP18.79■□□□□ 0.6
TSPAN3-207ENST00000559494 WWTR1Q9GZV5 400 aa18.79■□□□□ 0.6
TSPAN3-207ENST00000559494 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP18.79■□□□□ 0.6
TSPAN3-207ENST00000559494 BCAP29Q9UHQ4 241 aa18.79■□□□□ 0.6
TSPAN3-207ENST00000559494 ZNF462Q96JM2 2506 aa18.78■□□□□ 0.6
TSPAN3-207ENST00000559494 CDK2AP1O14519 115 aa18.78■□□□□ 0.6
TSPAN3-207ENST00000559494 PLOD3O60568 738 aa18.78■□□□□ 0.6
TSPAN3-207ENST00000559494 DIAPH2O60879 1101 aa18.78■□□□□ 0.6
TSPAN3-207ENST00000559494 TGDSO95455 350 aa18.78■□□□□ 0.6
TSPAN3-207ENST00000559494 EFNA1P20827 205 aaPredicted RBP18.78■□□□□ 0.6
TSPAN3-207ENST00000559494 RPL3P39023 403 aaKnown RBP18.78■□□□□ 0.6
TSPAN3-207ENST00000559494 EMDP50402 254 aa18.78■□□□□ 0.6
TSPAN3-207ENST00000559494 HLCSP50747 726 aa18.78■□□□□ 0.6
TSPAN3-207ENST00000559494 CPTPQ5TA50 214 aa18.78■□□□□ 0.6
TSPAN3-207ENST00000559494 SPINK14Q6IE38 97 aa18.78■□□□□ 0.6
TSPAN3-207ENST00000559494 ZNF441Q8N8Z8 693 aa18.78■□□□□ 0.6
TSPAN3-207ENST00000559494 OR52R1Q8NGF1 315 aa18.78■□□□□ 0.6
TSPAN3-207ENST00000559494 CEP70Q8NHQ1 597 aa18.78■□□□□ 0.6
TSPAN3-207ENST00000559494 ADIPOR1Q96A54 375 aa18.78■□□□□ 0.6
TSPAN3-207ENST00000559494 GAL3ST4Q96RP7 486 aa18.78■□□□□ 0.6
TSPAN3-207ENST00000559494 RASL10BQ96S79 203 aa18.78■□□□□ 0.6
TSPAN3-207ENST00000559494 TRIM45Q9H8W5 580 aaPredicted RBP18.78■□□□□ 0.6
TSPAN3-207ENST00000559494 AIG1Q9NVV5 245 aa18.78■□□□□ 0.6
TSPAN3-207ENST00000559494 DTX4Q9Y2E6 619 aa18.78■□□□□ 0.6
TSPAN3-207ENST00000559494 C2orf92A0A1B0GVN3 265 aa18.77■□□□□ 0.6
TSPAN3-207ENST00000559494 PLOD2O00469 737 aa18.77■□□□□ 0.6
TSPAN3-207ENST00000559494 EDF1O60869 148 aaKnown RBP18.77■□□□□ 0.6
TSPAN3-207ENST00000559494 SORBS2O94875 1100 aaKnown RBP18.77■□□□□ 0.6
TSPAN3-207ENST00000559494 NADKO95544 446 aaPredicted RBP18.77■□□□□ 0.6
TSPAN3-207ENST00000559494 IDH3AP50213 366 aa18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms