RNA–Protein interactions for RNA: ENST00000559463.5

RPL28-208, Transcript of ribosomal protein L28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPL28, Length 852 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-208ENST00000559463 OR52N2Q8NGI0 321 aa13.65□□□□□ -0.22
RPL28-208ENST00000559463 C16orf78Q8WTQ4 265 aa13.65□□□□□ -0.22
RPL28-208ENST00000559463 ADIPOR1Q96A54 375 aa13.65□□□□□ -0.22
RPL28-208ENST00000559463 CCDC120Q96HB5 630 aa13.65□□□□□ -0.22
RPL28-208ENST00000559463 FAM111AQ96PZ2 611 aa13.65□□□□□ -0.22
RPL28-208ENST00000559463 GATA5Q9BWX5 397 aaPredicted RBP13.65□□□□□ -0.22
RPL28-208ENST00000559463 PARD6BQ9BYG5 372 aa13.65□□□□□ -0.22
RPL28-208ENST00000559463 TTTY12Q9BZ98 90 aa13.65□□□□□ -0.22
RPL28-208ENST00000559463 ROPN1BQ9BZX4 212 aaPredicted RBP13.65□□□□□ -0.22
RPL28-208ENST00000559463 ROPN1Q9HAT0 212 aaPredicted RBP13.65□□□□□ -0.22
RPL28-208ENST00000559463 PLSCR2Q9NRY7 297 aa13.65□□□□□ -0.22
RPL28-208ENST00000559463 SIRT5Q9NXA8 310 aa13.65□□□□□ -0.22
RPL28-208ENST00000559463 MAT2BQ9NZL9 334 aa13.65□□□□□ -0.22
RPL28-208ENST00000559463 SLC17A7Q9P2U7 560 aa13.65□□□□□ -0.22
RPL28-208ENST00000559463 MID2Q9UJV3 735 aa13.65□□□□□ -0.22
RPL28-208ENST00000559463 UTS2RQ9UKP6 389 aa13.65□□□□□ -0.22
RPL28-208ENST00000559463 DTX4Q9Y2E6 619 aa13.65□□□□□ -0.22
RPL28-208ENST00000559463 NUP214P35658 2090 aaPredicted RBP13.65□□□□□ -0.22
RPL28-208ENST00000559463 PKDREJQ9NTG1 2253 aa13.64□□□□□ -0.23
RPL28-208ENST00000559463 MED12Q93074 2177 aa13.64□□□□□ -0.23
RPL28-208ENST00000559463 C2orf92A0A1B0GVN3 265 aa13.64□□□□□ -0.23
RPL28-208ENST00000559463 FAM166BA8MTA8 275 aa13.64□□□□□ -0.23
RPL28-208ENST00000559463 CCL21O00585 134 aa13.64□□□□□ -0.23
RPL28-208ENST00000559463 TRIM13O60858 407 aa13.64□□□□□ -0.23
RPL28-208ENST00000559463 SPAG7O75391 227 aa13.64□□□□□ -0.23
RPL28-208ENST00000559463 CREB1P16220 341 aa13.64□□□□□ -0.23
RPL28-208ENST00000559463 CSNK2A2P19784 350 aaPredicted RBP13.64□□□□□ -0.23
RPL28-208ENST00000559463 CNR1P21554 472 aa13.64□□□□□ -0.23
RPL28-208ENST00000559463 ALDH3A1P30838 453 aa13.64□□□□□ -0.23
RPL28-208ENST00000559463 DEKP35659 375 aaKnown RBP13.64□□□□□ -0.23
RPL28-208ENST00000559463 DNASE1L1P49184 302 aa13.64□□□□□ -0.23
RPL28-208ENST00000559463 FOXO1Q12778 655 aa13.64□□□□□ -0.23
RPL28-208ENST00000559463 EXOSC7Q15024 291 aaKnown RBP13.64□□□□□ -0.23
RPL28-208ENST00000559463 LTB4RQ15722 352 aa13.64□□□□□ -0.23
RPL28-208ENST00000559463 C6orf163Q5TEZ5 329 aa13.64□□□□□ -0.23
RPL28-208ENST00000559463 CLEC6AQ6EIG7 209 aa13.64□□□□□ -0.23
RPL28-208ENST00000559463 TMEM64Q6YI46 380 aa13.64□□□□□ -0.23
RPL28-208ENST00000559463 TRIM46Q7Z4K8 759 aa13.64□□□□□ -0.23
RPL28-208ENST00000559463 VWA5B2Q8N398 1253 aa13.64□□□□□ -0.23
RPL28-208ENST00000559463 ADCY4Q8NFM4 1077 aa13.64□□□□□ -0.23
RPL28-208ENST00000559463 OR10G3Q8NGC4 313 aa13.64□□□□□ -0.23
RPL28-208ENST00000559463 PAQR8Q8TEZ7 354 aa13.64□□□□□ -0.23
RPL28-208ENST00000559463 ITLN2Q8WWU7 325 aaPredicted RBP13.64□□□□□ -0.23
RPL28-208ENST00000559463 CTHRC1Q96CG8 243 aa13.64□□□□□ -0.23
RPL28-208ENST00000559463 FAM173AQ9BQD7 235 aa13.64□□□□□ -0.23
RPL28-208ENST00000559463 MECRQ9BV79 373 aa13.64□□□□□ -0.23
RPL28-208ENST00000559463 TMEM109Q9BVC6 243 aa13.64□□□□□ -0.23
RPL28-208ENST00000559463 BRINP2Q9C0B6 783 aa13.64□□□□□ -0.23
RPL28-208ENST00000559463 IQCGQ9H095 443 aaKnown RBP13.64□□□□□ -0.23
RPL28-208ENST00000559463 PROK2Q9HC23 129 aa13.64□□□□□ -0.23
RPL28-208ENST00000559463 SACM1LQ9NTJ5 587 aa13.64□□□□□ -0.23
RPL28-208ENST00000559463 ZNF639Q9UID6 485 aa13.64□□□□□ -0.23
RPL28-208ENST00000559463 RAB21Q9UL25 225 aa13.64□□□□□ -0.23
RPL28-208ENST00000559463 CCL27Q9Y4X3 112 aa13.64□□□□□ -0.23
RPL28-208ENST00000559463 PTGDR2Q9Y5Y4 395 aa13.64□□□□□ -0.23
RPL28-208ENST00000559463 CHCHD2Q9Y6H1 151 aaPredicted RBP13.64□□□□□ -0.23
RPL28-208ENST00000559463 NOTCH2Q04721 2471 aa13.63□□□□□ -0.23
RPL28-208ENST00000559463 A0A1B0GTH9 108 aa13.63□□□□□ -0.23
RPL28-208ENST00000559463 CDC40O60508 579 aaKnown RBP eCLIP13.63□□□□□ -0.23
RPL28-208ENST00000559463 CRCPO75575 148 aa13.63□□□□□ -0.23
RPL28-208ENST00000559463 CBX7O95931 251 aa13.63□□□□□ -0.23
RPL28-208ENST00000559463 P04436 131 aa13.63□□□□□ -0.23
RPL28-208ENST00000559463 ANXA4P09525 319 aaPredicted RBP13.63□□□□□ -0.23
RPL28-208ENST00000559463 UROSP10746 265 aa13.63□□□□□ -0.23
RPL28-208ENST00000559463 DRD2P14416 443 aa13.63□□□□□ -0.23
RPL28-208ENST00000559463 ABOP16442 354 aa13.63□□□□□ -0.23
RPL28-208ENST00000559463 GPX3P22352 226 aa13.63□□□□□ -0.23
RPL28-208ENST00000559463 COL8A1P27658 744 aa13.63□□□□□ -0.23
RPL28-208ENST00000559463 PIGAP37287 484 aa13.63□□□□□ -0.23
RPL28-208ENST00000559463 PPIAP62937 165 aaKnown RBP13.63□□□□□ -0.23
RPL28-208ENST00000559463 PLGLB1Q02325 96 aa13.63□□□□□ -0.23
RPL28-208ENST00000559463 ZNF763Q0D2J5 394 aa13.63□□□□□ -0.23
RPL28-208ENST00000559463 MAP4K2Q12851 820 aa13.63□□□□□ -0.23
RPL28-208ENST00000559463 NTRK2Q16620 822 aa13.63□□□□□ -0.23
RPL28-208ENST00000559463 PRSS53Q2L4Q9 553 aa13.63□□□□□ -0.23
RPL28-208ENST00000559463 SPDYAQ5MJ70 313 aa13.63□□□□□ -0.23
RPL28-208ENST00000559463 GK5Q6ZS86 529 aa13.63□□□□□ -0.23
RPL28-208ENST00000559463 FAM47EQ6ZV65 393 aa13.63□□□□□ -0.23
RPL28-208ENST00000559463 DND1Q8IYX4 353 aaKnown RBP13.63□□□□□ -0.23
RPL28-208ENST00000559463 LRRC25Q8N386 305 aaPredicted RBP13.63□□□□□ -0.23
RPL28-208ENST00000559463 FBXW8Q8N3Y1 598 aa13.63□□□□□ -0.23
RPL28-208ENST00000559463 FAM13CQ8NE31 585 aa13.63□□□□□ -0.23
RPL28-208ENST00000559463 TCP10LQ8TDR4 215 aa13.63□□□□□ -0.23
RPL28-208ENST00000559463 TP53INP1Q96A56 240 aa13.63□□□□□ -0.23
RPL28-208ENST00000559463 EXOSC8Q96B26 276 aaKnown RBP13.63□□□□□ -0.23
RPL28-208ENST00000559463 ZDHHC11Q9H8X9 412 aa13.63□□□□□ -0.23
RPL28-208ENST00000559463 TUBA8Q9NY65 449 aaPredicted RBP13.63□□□□□ -0.23
RPL28-208ENST00000559463 CNOT11Q9UKZ1 510 aaKnown RBP13.63□□□□□ -0.23
RPL28-208ENST00000559463 PSME2Q9UL46 239 aa13.63□□□□□ -0.23
RPL28-208ENST00000559463 ZNF780BQ9Y6R6 833 aa13.63□□□□□ -0.23
RPL28-208ENST00000559463 PCNX3Q9H6A9 2034 aa13.63□□□□□ -0.23
RPL28-208ENST00000559463 LRBAP50851 2863 aa13.62□□□□□ -0.23
RPL28-208ENST00000559463 AZIN1O14977 448 aa13.62□□□□□ -0.23
RPL28-208ENST00000559463 RSL1D1O76021 490 aaKnown RBP13.62□□□□□ -0.23
RPL28-208ENST00000559463 LRATO95237 230 aa13.62□□□□□ -0.23
RPL28-208ENST00000559463 CHRNGP07510 517 aa13.62□□□□□ -0.23
RPL28-208ENST00000559463 PCSK2P16519 638 aa13.62□□□□□ -0.23
RPL28-208ENST00000559463 CASP6P55212 293 aa13.62□□□□□ -0.23
RPL28-208ENST00000559463 FBXW4P57775 412 aa13.62□□□□□ -0.23
RPL28-208ENST00000559463 MRPS35P82673 323 aaKnown RBP13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 196.7 ms