RNA–Protein interactions for RNA: ENST00000559309.5

SNRPA1-207, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5

Gene SNRPA1, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-207ENST00000559309 DCTN3O75935 186 aa13.79□□□□□ -0.2
SNRPA1-207ENST00000559309 ZCCHC18P0CG32 403 aa13.79□□□□□ -0.2
SNRPA1-207ENST00000559309 ATXN8OSP0DMR3 200 aa13.79□□□□□ -0.2
SNRPA1-207ENST00000559309 ITPKBP27987 946 aa13.79□□□□□ -0.2
SNRPA1-207ENST00000559309 NTSP30990 170 aa13.79□□□□□ -0.2
SNRPA1-207ENST00000559309 OTX2P32243 289 aa13.79□□□□□ -0.2
SNRPA1-207ENST00000559309 CDK9P50750 372 aaKnown RBP13.79□□□□□ -0.2
SNRPA1-207ENST00000559309 NCBP2P52298 156 aaKnown RBP eCLIP13.79□□□□□ -0.21e-6■□□□□ 10.4
SNRPA1-207ENST00000559309 UCNP55089 124 aa13.79□□□□□ -0.2
SNRPA1-207ENST00000559309 SLC37A1P57057 533 aa13.79□□□□□ -0.2
SNRPA1-207ENST00000559309 EEF1A2Q05639 463 aaKnown RBP13.79□□□□□ -0.2
SNRPA1-207ENST00000559309 CHAF1BQ13112 559 aa13.79□□□□□ -0.2
SNRPA1-207ENST00000559309 COL28A1Q2UY09 1125 aa13.79□□□□□ -0.2
SNRPA1-207ENST00000559309 PAGE3Q5JUK9 113 aa13.79□□□□□ -0.2
SNRPA1-207ENST00000559309 DCAF10Q5QP82 559 aa13.79□□□□□ -0.2
SNRPA1-207ENST00000559309 ATP1A1-AS1Q5TC04 95 aa13.79□□□□□ -0.2
SNRPA1-207ENST00000559309 C19orf48Q6RUI8 117 aa13.79□□□□□ -0.2
SNRPA1-207ENST00000559309 FAM111BQ6SJ93 734 aa13.79□□□□□ -0.2
SNRPA1-207ENST00000559309 GK5Q6ZS86 529 aa13.79□□□□□ -0.2
SNRPA1-207ENST00000559309 GPR155Q7Z3F1 870 aa13.79□□□□□ -0.2
SNRPA1-207ENST00000559309 RETREG3Q86VR2 466 aa13.79□□□□□ -0.2
SNRPA1-207ENST00000559309 APLFQ8IW19 511 aaPredicted RBP13.79□□□□□ -0.2
SNRPA1-207ENST00000559309 GALNT12Q8IXK2 581 aa13.79□□□□□ -0.2
SNRPA1-207ENST00000559309 CLECL1Q8IZS7 167 aa13.79□□□□□ -0.2
SNRPA1-207ENST00000559309 ZSCAN1Q8NBB4 408 aa13.79□□□□□ -0.2
SNRPA1-207ENST00000559309 SIMC1Q8NDZ2 872 aa13.79□□□□□ -0.2
SNRPA1-207ENST00000559309 OR7G2Q8NG99 324 aa13.79□□□□□ -0.2
SNRPA1-207ENST00000559309 OR8K3Q8NH51 312 aa13.79□□□□□ -0.2
SNRPA1-207ENST00000559309 SLC2A12Q8TD20 617 aa13.79□□□□□ -0.2
SNRPA1-207ENST00000559309 PSMF1Q92530 271 aa13.79□□□□□ -0.2
SNRPA1-207ENST00000559309 DAZLQ92904 295 aaKnown RBP13.79□□□□□ -0.2
SNRPA1-207ENST00000559309 RIT1Q92963 219 aa13.79□□□□□ -0.2
SNRPA1-207ENST00000559309 VPS33AQ96AX1 596 aa13.79□□□□□ -0.2
SNRPA1-207ENST00000559309 GIMAP5Q96F15 307 aa13.79□□□□□ -0.2
SNRPA1-207ENST00000559309 SENP5Q96HI0 755 aaPredicted RBP13.79□□□□□ -0.2
SNRPA1-207ENST00000559309 BBS4Q96RK4 519 aa13.79□□□□□ -0.2
SNRPA1-207ENST00000559309 CXorf36Q9H7Y0 433 aa13.79□□□□□ -0.2
SNRPA1-207ENST00000559309 NEUROD4Q9HD90 331 aa13.79□□□□□ -0.2
SNRPA1-207ENST00000559309 TAS2R9Q9NYW1 312 aa13.79□□□□□ -0.2
SNRPA1-207ENST00000559309 PTGFRNQ9P2B2 879 aa13.79□□□□□ -0.2
SNRPA1-207ENST00000559309 FBXL4Q9UKA2 621 aa13.79□□□□□ -0.2
SNRPA1-207ENST00000559309 C19orf53Q9UNZ5 99 aaPredicted RBP13.79□□□□□ -0.2
SNRPA1-207ENST00000559309 DOCK10Q96BY6 2186 aa13.78□□□□□ -0.2
SNRPA1-207ENST00000559309 UPK1AO00322 258 aa13.78□□□□□ -0.2
SNRPA1-207ENST00000559309 CFLARO15519 480 aa13.78□□□□□ -0.2
SNRPA1-207ENST00000559309 SEC24DO94855 1032 aaPredicted RBP13.78□□□□□ -0.2
SNRPA1-207ENST00000559309 C6orf47O95873 294 aa13.78□□□□□ -0.2
SNRPA1-207ENST00000559309 SNRPB2P08579 225 aaKnown RBP13.78□□□□□ -0.2
SNRPA1-207ENST00000559309 PRDX6P30041 224 aa13.78□□□□□ -0.2
SNRPA1-207ENST00000559309 TRPC1P48995 793 aa13.78□□□□□ -0.2
SNRPA1-207ENST00000559309 EMDP50402 254 aa13.78□□□□□ -0.2
SNRPA1-207ENST00000559309 MANFP55145 182 aaKnown RBP13.78□□□□□ -0.2
SNRPA1-207ENST00000559309 EXT1Q16394 746 aa13.78□□□□□ -0.2
SNRPA1-207ENST00000559309 PGS1Q32NB8 556 aa13.78□□□□□ -0.2
SNRPA1-207ENST00000559309 VPS26BQ4G0F5 336 aa13.78□□□□□ -0.2
SNRPA1-207ENST00000559309 TIGD2Q4W5G0 525 aa13.78□□□□□ -0.2
SNRPA1-207ENST00000559309 TRMT12Q53H54 448 aaKnown RBP13.78□□□□□ -0.2
SNRPA1-207ENST00000559309 DLEU7Q6UYE1 221 aa13.78□□□□□ -0.2
SNRPA1-207ENST00000559309 MSRB3Q8IXL7 192 aa13.78□□□□□ -0.2
SNRPA1-207ENST00000559309 VWA5B2Q8N398 1253 aa13.78□□□□□ -0.2
SNRPA1-207ENST00000559309 ZNF321PQ8N8H1 164 aa13.78□□□□□ -0.2
SNRPA1-207ENST00000559309 ZNF441Q8N8Z8 693 aa13.78□□□□□ -0.2
SNRPA1-207ENST00000559309 TMEM102Q8N9M5 508 aaPredicted RBP13.78□□□□□ -0.2
SNRPA1-207ENST00000559309 OR7G1Q8NGA0 311 aa13.78□□□□□ -0.2
SNRPA1-207ENST00000559309 ZFP28Q8NHY6 868 aa13.78□□□□□ -0.2
SNRPA1-207ENST00000559309 RP9Q8TA86 221 aaKnown RBP13.78□□□□□ -0.2
SNRPA1-207ENST00000559309 VPS50Q96JG6 964 aa13.78□□□□□ -0.2
SNRPA1-207ENST00000559309 LRRC37BQ96QE4 947 aa13.78□□□□□ -0.2
SNRPA1-207ENST00000559309 OR52E6Q96RD3 313 aa13.78□□□□□ -0.2
SNRPA1-207ENST00000559309 SLC25A23Q9BV35 468 aa13.78□□□□□ -0.2
SNRPA1-207ENST00000559309 NUDT9Q9BW91 350 aa13.78□□□□□ -0.2
SNRPA1-207ENST00000559309 PAIP1Q9H074 479 aaKnown RBP13.78□□□□□ -0.2
SNRPA1-207ENST00000559309 PNO1Q9NRX1 252 aaKnown RBP13.78□□□□□ -0.2
SNRPA1-207ENST00000559309 SLC6A13Q9NSD5 602 aa13.78□□□□□ -0.2
SNRPA1-207ENST00000559309 MAP10Q9P2G4 905 aa13.78□□□□□ -0.2
SNRPA1-207ENST00000559309 CAPN7Q9Y6W3 813 aa13.78□□□□□ -0.2
SNRPA1-207ENST00000559309 CPAMD8Q8IZJ3 1885 aa13.78□□□□□ -0.2
SNRPA1-207ENST00000559309 NUP214P35658 2090 aaPredicted RBP13.78□□□□□ -0.2
SNRPA1-207ENST00000559309 MED13Q9UHV7 2174 aa13.78□□□□□ -0.2
SNRPA1-207ENST00000559309 KALRNO60229 2985 aa13.77□□□□□ -0.2
SNRPA1-207ENST00000559309 NSG1A0A0A6YYJ2 146 aa13.77□□□□□ -0.21
SNRPA1-207ENST00000559309 CDC14CA4D256 554 aa13.77□□□□□ -0.21
SNRPA1-207ENST00000559309 CCDC154A6NI56 674 aa13.77□□□□□ -0.21
SNRPA1-207ENST00000559309 OR10H2O60403 315 aa13.77□□□□□ -0.21
SNRPA1-207ENST00000559309 CEACAM4O75871 244 aa13.77□□□□□ -0.21
SNRPA1-207ENST00000559309 IFNA16P05015 189 aa13.77□□□□□ -0.21
SNRPA1-207ENST00000559309 PTGER1P34995 402 aa13.77□□□□□ -0.21
SNRPA1-207ENST00000559309 CDKN2CP42773 168 aa13.77□□□□□ -0.21
SNRPA1-207ENST00000559309 MVDP53602 400 aa13.77□□□□□ -0.21
SNRPA1-207ENST00000559309 KCNK10P57789 538 aa13.77□□□□□ -0.21
SNRPA1-207ENST00000559309 MRPS35P82673 323 aaKnown RBP13.77□□□□□ -0.21
SNRPA1-207ENST00000559309 CCDC81Q6ZN84 652 aa13.77□□□□□ -0.21
SNRPA1-207ENST00000559309 VPS37AQ8NEZ2 397 aa13.77□□□□□ -0.21
SNRPA1-207ENST00000559309 ADCY4Q8NFM4 1077 aa13.77□□□□□ -0.21
SNRPA1-207ENST00000559309 SFXN5Q8TD22 340 aa13.77□□□□□ -0.21
SNRPA1-207ENST00000559309 FAM120BQ96EK7 910 aaKnown RBP13.77□□□□□ -0.21
SNRPA1-207ENST00000559309 VMP1Q96GC9 406 aa13.77□□□□□ -0.21
SNRPA1-207ENST00000559309 ART5Q96L15 291 aa13.77□□□□□ -0.21
SNRPA1-207ENST00000559309 INPP5KQ9BT40 448 aa13.77□□□□□ -0.21
SNRPA1-207ENST00000559309 GPATCH2Q9NW75 528 aa13.77□□□□□ -0.21
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