RNA–Protein interactions for RNA: ENST00000559061.5

SNX1-204, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-204ENST00000559061 PELOQ9BRX2 385 aaKnown RBP10.6□□□□□ -0.71
SNX1-204ENST00000559061 ACBD3Q9H3P7 528 aa10.6□□□□□ -0.71
SNX1-204ENST00000559061 TRIM45Q9H8W5 580 aaPredicted RBP10.6□□□□□ -0.71
SNX1-204ENST00000559061 SIRT3Q9NTG7 399 aaPredicted RBP10.6□□□□□ -0.71
SNX1-204ENST00000559061 AIG1Q9NVV5 245 aa10.6□□□□□ -0.71
SNX1-204ENST00000559061 ANKRD10Q9NXR5 420 aa10.6□□□□□ -0.71
SNX1-204ENST00000559061 MAP10Q9P2G4 905 aa10.6□□□□□ -0.71
SNX1-204ENST00000559061 MYOTQ9UBF9 498 aa10.6□□□□□ -0.71
SNX1-204ENST00000559061 NTNG1Q9Y2I2 539 aa10.6□□□□□ -0.71
SNX1-204ENST00000559061 GPR45Q9Y5Y3 372 aa10.6□□□□□ -0.71
SNX1-204ENST00000559061 TCP11X1B4DZS4 312 aa10.59□□□□□ -0.71
SNX1-204ENST00000559061 C9JVG2 144 aa10.59□□□□□ -0.71
SNX1-204ENST00000559061 WWP2O00308 870 aa10.59□□□□□ -0.71
SNX1-204ENST00000559061 DYNC1I1O14576 645 aa10.59□□□□□ -0.71
SNX1-204ENST00000559061 SUV39H1O43463 412 aa10.59□□□□□ -0.71
SNX1-204ENST00000559061 SCN2BO60939 215 aa10.59□□□□□ -0.71
SNX1-204ENST00000559061 ITGA10O75578 1167 aa10.59□□□□□ -0.71
SNX1-204ENST00000559061 OR2J2O76002 312 aa10.59□□□□□ -0.71
SNX1-204ENST00000559061 C1QCP02747 245 aa10.59□□□□□ -0.71
SNX1-204ENST00000559061 SFTPCP11686 197 aa10.59□□□□□ -0.71
SNX1-204ENST00000559061 PRPS2P11908 318 aa10.59□□□□□ -0.71
SNX1-204ENST00000559061 LBPP18428 481 aa10.59□□□□□ -0.71
SNX1-204ENST00000559061 GPX3P22352 226 aa10.59□□□□□ -0.71
SNX1-204ENST00000559061 TRHRP34981 398 aaPredicted RBP10.59□□□□□ -0.71
SNX1-204ENST00000559061 IDH3AP50213 366 aa10.59□□□□□ -0.71
SNX1-204ENST00000559061 TNFSF10P50591 281 aa10.59□□□□□ -0.71
SNX1-204ENST00000559061 CDK9P50750 372 aaKnown RBP10.59□□□□□ -0.71
SNX1-204ENST00000559061 CLDN8P56748 225 aa10.59□□□□□ -0.71
SNX1-204ENST00000559061 BIKQ13323 160 aa10.59□□□□□ -0.71
SNX1-204ENST00000559061 MEP1AQ16819 746 aa10.59□□□□□ -0.71
SNX1-204ENST00000559061 LSM12Q3MHD2 195 aaKnown RBP10.59□□□□□ -0.71
SNX1-204ENST00000559061 HSDL2Q6YN16 418 aa10.59□□□□□ -0.71
SNX1-204ENST00000559061 CAMKMTQ7Z624 323 aa10.59□□□□□ -0.71
SNX1-204ENST00000559061 HOMEZQ8IX15 550 aa10.59□□□□□ -0.71
SNX1-204ENST00000559061 VWA5B2Q8N398 1253 aa10.59□□□□□ -0.71
SNX1-204ENST00000559061 SLC5A8Q8N695 610 aa10.59□□□□□ -0.71
SNX1-204ENST00000559061 OR52R1Q8NGF1 315 aa10.59□□□□□ -0.71
SNX1-204ENST00000559061 RFWD2Q8NHY2 731 aa10.59□□□□□ -0.71
SNX1-204ENST00000559061 NUBPLQ8TB37 319 aa10.59□□□□□ -0.71
SNX1-204ENST00000559061 ACTRT2Q8TDY3 377 aa10.59□□□□□ -0.71
SNX1-204ENST00000559061 COQ8BQ96D53 544 aa10.59□□□□□ -0.71
SNX1-204ENST00000559061 RASL10BQ96S79 203 aa10.59□□□□□ -0.71
SNX1-204ENST00000559061 DEFB126Q9BYW3 111 aa10.59□□□□□ -0.71
SNX1-204ENST00000559061 BRINP2Q9C0B6 783 aa10.59□□□□□ -0.71
SNX1-204ENST00000559061 WWTR1Q9GZV5 400 aa10.59□□□□□ -0.71
SNX1-204ENST00000559061 EPN3Q9H201 632 aa10.59□□□□□ -0.71
SNX1-204ENST00000559061 OR10A5Q9H207 317 aa10.59□□□□□ -0.71
SNX1-204ENST00000559061 SH2D2AQ9NP31 389 aa10.59□□□□□ -0.71
SNX1-204ENST00000559061 STMN3Q9NZ72 180 aa10.59□□□□□ -0.71
SNX1-204ENST00000559061 NOP53Q9NZM5 478 aaKnown RBP10.59□□□□□ -0.71
SNX1-204ENST00000559061 PCDHGA10Q9Y5H3 936 aa10.59□□□□□ -0.71
SNX1-204ENST00000559061 ZNF780BQ9Y6R6 833 aa10.59□□□□□ -0.71
SNX1-204ENST00000559061 NUP214P35658 2090 aaPredicted RBP10.59□□□□□ -0.71
SNX1-204ENST00000559061 GIMAP1-GIMAP5A0A087WTJ2 511 aa10.58□□□□□ -0.72
SNX1-204ENST00000559061 A0A0G2JMM0 328 aa10.58□□□□□ -0.72
SNX1-204ENST00000559061 A0A1W2PPB8 328 aa10.58□□□□□ -0.72
SNX1-204ENST00000559061 A0A1W2PRS3 328 aa10.58□□□□□ -0.72
SNX1-204ENST00000559061 OR5H15A6NDH6 313 aa10.58□□□□□ -0.72
SNX1-204ENST00000559061 KIR3DP1A8MWS1 328 aa10.58□□□□□ -0.72
SNX1-204ENST00000559061 UPK1AO00322 258 aa10.58□□□□□ -0.72
SNX1-204ENST00000559061 PLOD3O60568 738 aa10.58□□□□□ -0.72
SNX1-204ENST00000559061 DPM1O60762 260 aa10.58□□□□□ -0.72
SNX1-204ENST00000559061 WISP2O76076 250 aa10.58□□□□□ -0.72
SNX1-204ENST00000559061 ZFAND5O76080 213 aa10.58□□□□□ -0.72
SNX1-204ENST00000559061 OR6B1O95007 311 aa10.58□□□□□ -0.72
SNX1-204ENST00000559061 ALPPP05187 535 aa10.58□□□□□ -0.72
SNX1-204ENST00000559061 COX7A2P14406 83 aa10.58□□□□□ -0.72
SNX1-204ENST00000559061 SOX3P41225 446 aa10.58□□□□□ -0.72
SNX1-204ENST00000559061 MC3RP41968 323 aa10.58□□□□□ -0.72
SNX1-204ENST00000559061 ASMTP46597 345 aa10.58□□□□□ -0.72
SNX1-204ENST00000559061 NCBP2P52298 156 aaKnown RBP eCLIP10.58□□□□□ -0.72
SNX1-204ENST00000559061 UFM1P61960 85 aa10.58□□□□□ -0.72
SNX1-204ENST00000559061 KLRB1Q12918 225 aa10.58□□□□□ -0.72
SNX1-204ENST00000559061 EXOSC6Q5RKV6 272 aaKnown RBP10.58□□□□□ -0.72
SNX1-204ENST00000559061 ABHD17BQ5VST6 288 aa10.58□□□□□ -0.72
SNX1-204ENST00000559061 TMEM107Q6UX40 140 aa10.58□□□□□ -0.72
SNX1-204ENST00000559061 NPSR1Q6W5P4 371 aa10.58□□□□□ -0.72
SNX1-204ENST00000559061 RNF111Q6ZNA4 994 aa10.58□□□□□ -0.72
SNX1-204ENST00000559061 FAM9CQ8IZT9 166 aa10.58□□□□□ -0.72
SNX1-204ENST00000559061 KIRREL3Q8IZU9 778 aa10.58□□□□□ -0.72
SNX1-204ENST00000559061 OR2L13Q8N349 312 aa10.58□□□□□ -0.72
SNX1-204ENST00000559061 DYDC1Q8WWB3 177 aa10.58□□□□□ -0.72
SNX1-204ENST00000559061 HOXB13Q92826 284 aaPredicted RBP10.58□□□□□ -0.72
SNX1-204ENST00000559061 PNPLA2Q96AD5 504 aa10.58□□□□□ -0.72
SNX1-204ENST00000559061 PPCDCQ96CD2 204 aa10.58□□□□□ -0.72
SNX1-204ENST00000559061 MTERF3Q96E29 417 aa10.58□□□□□ -0.72
SNX1-204ENST00000559061 GIMAP5Q96F15 307 aa10.58□□□□□ -0.72
SNX1-204ENST00000559061 THOC1Q96FV9 657 aaKnown RBP10.58□□□□□ -0.72
SNX1-204ENST00000559061 SCMH1Q96GD3 660 aa10.58□□□□□ -0.72
SNX1-204ENST00000559061 ZNF354BQ96LW1 612 aa10.58□□□□□ -0.72
SNX1-204ENST00000559061 ITPAQ9BY32 194 aa10.58□□□□□ -0.72
SNX1-204ENST00000559061 CLMPQ9H6B4 373 aa10.58□□□□□ -0.72
SNX1-204ENST00000559061 CCDC134Q9H6E4 229 aa10.58□□□□□ -0.72
SNX1-204ENST00000559061 MIEF1Q9NQG6 463 aa10.58□□□□□ -0.72
SNX1-204ENST00000559061 ENTPD4Q9Y227 616 aa10.58□□□□□ -0.72
SNX1-204ENST00000559061 B3GNT3Q9Y2A9 372 aa10.58□□□□□ -0.72
SNX1-204ENST00000559061 SPTA1P02549 2419 aa10.58□□□□□ -0.72
SNX1-204ENST00000559061 RELNP78509 3460 aa10.58□□□□□ -0.72
SNX1-204ENST00000559061 NCKAP5O14513 1909 aa10.58□□□□□ -0.72
SNX1-204ENST00000559061 TRPC5OSA6NMA1 111 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms