RNA–Protein interactions for RNA: ENST00000558954.5

RABGGTA-208, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-208ENST00000558954 CYB561P49447 251 aa17.51■□□□□ 0.39
RABGGTA-208ENST00000558954 OC90Q02509 493 aaPredicted RBP17.51■□□□□ 0.39
RABGGTA-208ENST00000558954 EBPQ15125 230 aaKnown RBP17.51■□□□□ 0.39
RABGGTA-208ENST00000558954 PLEKHN1Q494U1 663 aaPredicted RBP17.51■□□□□ 0.39
RABGGTA-208ENST00000558954 OGFOD2Q6N063 350 aa17.51■□□□□ 0.39
RABGGTA-208ENST00000558954 WDR75Q8IWA0 830 aaKnown RBP17.51■□□□□ 0.39
RABGGTA-208ENST00000558954 CCDC116Q8IYX3 515 aa17.51■□□□□ 0.39
RABGGTA-208ENST00000558954 TMEM156Q8N614 296 aa17.51■□□□□ 0.39
RABGGTA-208ENST00000558954 ARFGAP2Q8N6H7 521 aa17.51■□□□□ 0.39
RABGGTA-208ENST00000558954 Q8NA96 180 aa17.51■□□□□ 0.39
RABGGTA-208ENST00000558954 OR9A2Q8NGT5 310 aa17.51■□□□□ 0.39
RABGGTA-208ENST00000558954 CTHRC1Q96CG8 243 aa17.51■□□□□ 0.39
RABGGTA-208ENST00000558954 MAGEB18Q96M61 343 aa17.51■□□□□ 0.39
RABGGTA-208ENST00000558954 WWTR1Q9GZV5 400 aa17.51■□□□□ 0.39
RABGGTA-208ENST00000558954 EPN3Q9H201 632 aa17.51■□□□□ 0.39
RABGGTA-208ENST00000558954 OR10A5Q9H207 317 aa17.51■□□□□ 0.39
RABGGTA-208ENST00000558954 ANKRD10Q9NXR5 420 aa17.51■□□□□ 0.39
RABGGTA-208ENST00000558954 CFL2Q9Y281 166 aa17.51■□□□□ 0.39
RABGGTA-208ENST00000558954 PCDHGA10Q9Y5H3 936 aa17.51■□□□□ 0.39
RABGGTA-208ENST00000558954 NBASA2RRP1 2371 aa17.5■□□□□ 0.39
RABGGTA-208ENST00000558954 WWP2O00308 870 aa17.5■□□□□ 0.39
RABGGTA-208ENST00000558954 SDHDO14521 159 aa17.5■□□□□ 0.39
RABGGTA-208ENST00000558954 SLC28A2O43868 658 aa17.5■□□□□ 0.39
RABGGTA-208ENST00000558954 PRAMEF2O60811 474 aa17.5■□□□□ 0.39
RABGGTA-208ENST00000558954 CLPSP04118 112 aa17.5■□□□□ 0.39
RABGGTA-208ENST00000558954 PRPS1L1P21108 318 aa17.5■□□□□ 0.39
RABGGTA-208ENST00000558954 TRHRP34981 398 aaPredicted RBP17.5■□□□□ 0.39
RABGGTA-208ENST00000558954 CD96P40200 585 aa17.5■□□□□ 0.39
RABGGTA-208ENST00000558954 HLCSP50747 726 aa17.5■□□□□ 0.39
RABGGTA-208ENST00000558954 NCBP2P52298 156 aaKnown RBP eCLIP17.5■□□□□ 0.391e-10■■■□□ 14.8
RABGGTA-208ENST00000558954 MRPS35P82673 323 aaKnown RBP17.5■□□□□ 0.39
RABGGTA-208ENST00000558954 MGAT2Q10469 447 aa17.5■□□□□ 0.39
RABGGTA-208ENST00000558954 OR1C1Q15619 314 aa17.5■□□□□ 0.39
RABGGTA-208ENST00000558954 MPEG1Q2M385 716 aa17.5■□□□□ 0.39
RABGGTA-208ENST00000558954 ZNF628Q5EBL2 1059 aa17.5■□□□□ 0.39
RABGGTA-208ENST00000558954 ANKRD26P1Q6NSI1 321 aa17.5■□□□□ 0.39
RABGGTA-208ENST00000558954 FAM111BQ6SJ93 734 aa17.5■□□□□ 0.39
RABGGTA-208ENST00000558954 MDS2Q8NDY4 140 aa17.5■□□□□ 0.39
RABGGTA-208ENST00000558954 CATSPER1Q8NEC5 780 aa17.5■□□□□ 0.39
RABGGTA-208ENST00000558954 ZFP28Q8NHY6 868 aa17.5■□□□□ 0.39
RABGGTA-208ENST00000558954 CKAP2Q8WWK9 683 aa17.5■□□□□ 0.39
RABGGTA-208ENST00000558954 ASB15Q8WXK1 588 aa17.5■□□□□ 0.39
RABGGTA-208ENST00000558954 LIN28AQ9H9Z2 209 aaKnown RBP17.5■□□□□ 0.39
RABGGTA-208ENST00000558954 SLCO1B3Q9NPD5 702 aa17.5■□□□□ 0.39
RABGGTA-208ENST00000558954 RYDENQ9NUL5 291 aaKnown RBP17.5■□□□□ 0.39
RABGGTA-208ENST00000558954 SH3BP4Q9P0V3 963 aa17.5■□□□□ 0.39
RABGGTA-208ENST00000558954 LRFN1Q9P244 771 aa17.5■□□□□ 0.39
RABGGTA-208ENST00000558954 ZNF639Q9UID6 485 aa17.5■□□□□ 0.39
RABGGTA-208ENST00000558954 MAPRE3Q9UPY8 281 aa17.5■□□□□ 0.39
RABGGTA-208ENST00000558954 TTLL8A6PVC2 850 aa17.49■□□□□ 0.39
RABGGTA-208ENST00000558954 BCAS2O75934 225 aaPredicted RBP17.49■□□□□ 0.39
RABGGTA-208ENST00000558954 G6PDP11413 515 aa17.49■□□□□ 0.39
RABGGTA-208ENST00000558954 PCSK2P16519 638 aa17.49■□□□□ 0.39
RABGGTA-208ENST00000558954 S1PR1P21453 382 aa17.49■□□□□ 0.39
RABGGTA-208ENST00000558954 EXOSC7Q15024 291 aaKnown RBP17.49■□□□□ 0.39
RABGGTA-208ENST00000558954 INAQ16352 499 aa17.49■□□□□ 0.39
RABGGTA-208ENST00000558954 PRSS53Q2L4Q9 553 aa17.49■□□□□ 0.39
RABGGTA-208ENST00000558954 HLA-DQA1Q5Y7H0 255 aa17.49■□□□□ 0.39
RABGGTA-208ENST00000558954 LARP4Q71RC2 724 aaKnown RBP eCLIP17.49■□□□□ 0.39
RABGGTA-208ENST00000558954 ZNF605Q86T29 641 aa17.49■□□□□ 0.39
RABGGTA-208ENST00000558954 GPALPP1Q8IXQ4 340 aa17.49■□□□□ 0.39
RABGGTA-208ENST00000558954 CYP4Z2PQ8N1L4 340 aa17.49■□□□□ 0.39
RABGGTA-208ENST00000558954 ZNF615Q8N8J6 731 aa17.49■□□□□ 0.39
RABGGTA-208ENST00000558954 C16orf52Q8NHV5 167 aa17.49■□□□□ 0.39
RABGGTA-208ENST00000558954 SLC22A8Q8TCC7 542 aa17.49■□□□□ 0.39
RABGGTA-208ENST00000558954 ZBED6CLQ96FA7 236 aaPredicted RBP17.49■□□□□ 0.39
RABGGTA-208ENST00000558954 C5orf34Q96MH7 638 aa17.49■□□□□ 0.39
RABGGTA-208ENST00000558954 AMDHD1Q96NU7 426 aa17.49■□□□□ 0.39
RABGGTA-208ENST00000558954 RASL10BQ96S79 203 aa17.49■□□□□ 0.39
RABGGTA-208ENST00000558954 PRPF18Q99633 342 aaKnown RBP17.49■□□□□ 0.39
RABGGTA-208ENST00000558954 TRIM45Q9H8W5 580 aaPredicted RBP17.49■□□□□ 0.39
RABGGTA-208ENST00000558954 ATAD3AQ9NVI7 634 aa17.49■□□□□ 0.39
RABGGTA-208ENST00000558954 BCAP29Q9UHQ4 241 aa17.49■□□□□ 0.39
RABGGTA-208ENST00000558954 ATP6V1HQ9UI12 483 aa17.49■□□□□ 0.39
RABGGTA-208ENST00000558954 RP1L1Q8IWN7 2480 aaPredicted RBP17.49■□□□□ 0.39
RABGGTA-208ENST00000558954 NINQ8N4C6 2090 aa17.48■□□□□ 0.39
RABGGTA-208ENST00000558954 C2orf92A0A1B0GVN3 265 aa17.48■□□□□ 0.39
RABGGTA-208ENST00000558954 A8MVJ9 347 aa17.48■□□□□ 0.39
RABGGTA-208ENST00000558954 PLOD3O60568 738 aa17.48■□□□□ 0.39
RABGGTA-208ENST00000558954 CBX7O95931 251 aa17.48■□□□□ 0.39
RABGGTA-208ENST00000558954 CD46P15529 392 aa17.48■□□□□ 0.39
RABGGTA-208ENST00000558954 EPHA3P29320 983 aa17.48■□□□□ 0.39
RABGGTA-208ENST00000558954 ST13P50502 369 aaKnown RBP17.48■□□□□ 0.39
RABGGTA-208ENST00000558954 C21orf58P58505 322 aa17.48■□□□□ 0.39
RABGGTA-208ENST00000558954 TRMT12Q53H54 448 aaKnown RBP17.48■□□□□ 0.39
RABGGTA-208ENST00000558954 ZNF385BQ569K4 471 aa17.48■□□□□ 0.39
RABGGTA-208ENST00000558954 ZNF468Q5VIY5 522 aaPredicted RBP17.48■□□□□ 0.39
RABGGTA-208ENST00000558954 OPN5Q6U736 354 aa17.48■□□□□ 0.39
RABGGTA-208ENST00000558954 C16orf47Q6ZP98 133 aaPredicted RBP17.48■□□□□ 0.39
RABGGTA-208ENST00000558954 RGS9BPQ6ZS82 235 aa17.48■□□□□ 0.39
RABGGTA-208ENST00000558954 TMEM178AQ8NBL3 297 aa17.48■□□□□ 0.39
RABGGTA-208ENST00000558954 C17orf47Q8NEP4 570 aa17.48■□□□□ 0.39
RABGGTA-208ENST00000558954 KAT2AQ92830 837 aa17.48■□□□□ 0.39
RABGGTA-208ENST00000558954 TMEM125Q96AQ2 219 aa17.48■□□□□ 0.39
RABGGTA-208ENST00000558954 CIDECQ96AQ7 238 aaPredicted RBP17.48■□□□□ 0.39
RABGGTA-208ENST00000558954 SIGLEC12Q96PQ1 595 aa17.48■□□□□ 0.39
RABGGTA-208ENST00000558954 GLIPR2Q9H4G4 154 aa17.48■□□□□ 0.39
RABGGTA-208ENST00000558954 ACSS1Q9NUB1 689 aaPredicted RBP17.48■□□□□ 0.39
RABGGTA-208ENST00000558954 HPF1Q9NWY4 346 aa17.48■□□□□ 0.39
RABGGTA-208ENST00000558954 PRODH2Q9UF12 536 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms