RNA–Protein interactions for RNA: ENST00000558910.2

TPM1-216, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-216ENST00000558910 KLF13Q9Y2Y9 288 aaPredicted RBP11.11□□□□□ -0.63
TPM1-216ENST00000558910 ICE1Q9Y2F5 2266 aa11.11□□□□□ -0.63
TPM1-216ENST00000558910 DIDO1Q9BTC0 2240 aaKnown RBP11.11□□□□□ -0.63
TPM1-216ENST00000558910 WDR91A4D1P6 747 aa11.1□□□□□ -0.63
TPM1-216ENST00000558910 KLRC4-KLRK1H3BQV0 150 aa11.1□□□□□ -0.63
TPM1-216ENST00000558910 LDLRP01130 860 aa11.1□□□□□ -0.63
TPM1-216ENST00000558910 SLC35E2P0CK97 266 aa11.1□□□□□ -0.63
TPM1-216ENST00000558910 CCL3P10147 92 aa11.1□□□□□ -0.63
TPM1-216ENST00000558910 ESRRAP11474 423 aaPredicted RBP11.1□□□□□ -0.63
TPM1-216ENST00000558910 CPMP14384 443 aa11.1□□□□□ -0.63
TPM1-216ENST00000558910 PORP16435 677 aaPredicted RBP11.1□□□□□ -0.63
TPM1-216ENST00000558910 PIGAP37287 484 aa11.1□□□□□ -0.63
TPM1-216ENST00000558910 RAE1P78406 368 aaKnown RBP11.1□□□□□ -0.63
TPM1-216ENST00000558910 RBPJQ06330 500 aa11.1□□□□□ -0.63
TPM1-216ENST00000558910 CSTF3Q12996 717 aaKnown RBP11.1□□□□□ -0.63
TPM1-216ENST00000558910 PCLAFQ15004 111 aa11.1□□□□□ -0.63
TPM1-216ENST00000558910 KRT71Q3SY84 523 aa11.1□□□□□ -0.63
TPM1-216ENST00000558910 FRMD7Q6ZUT3 714 aa11.1□□□□□ -0.63
TPM1-216ENST00000558910 FAM47EQ6ZV65 393 aa11.1□□□□□ -0.63
TPM1-216ENST00000558910 LCA5Q86VQ0 697 aa11.1□□□□□ -0.63
TPM1-216ENST00000558910 SIMC1Q8NDZ2 872 aa11.1□□□□□ -0.63
TPM1-216ENST00000558910 MYRIPQ8NFW9 859 aa11.1□□□□□ -0.63
TPM1-216ENST00000558910 CHTF18Q8WVB6 975 aa11.1□□□□□ -0.63
TPM1-216ENST00000558910 GFM2Q969S9 779 aaKnown RBP11.1□□□□□ -0.63
TPM1-216ENST00000558910 CCDC126Q96EE4 140 aa11.1□□□□□ -0.63
TPM1-216ENST00000558910 FBXL20Q96IG2 436 aa11.1□□□□□ -0.63
TPM1-216ENST00000558910 APOPT1Q96IL0 206 aa11.1□□□□□ -0.63
TPM1-216ENST00000558910 ART5Q96L15 291 aa11.1□□□□□ -0.63
TPM1-216ENST00000558910 GPR137Q96N19 417 aa11.1□□□□□ -0.63
TPM1-216ENST00000558910 PSMG3-AS1Q96PY0 264 aa11.1□□□□□ -0.63
TPM1-216ENST00000558910 UCN2Q96RP3 112 aa11.1□□□□□ -0.63
TPM1-216ENST00000558910 FAIM2Q9BWQ8 316 aa11.1□□□□□ -0.63
TPM1-216ENST00000558910 GATA5Q9BWX5 397 aaPredicted RBP11.1□□□□□ -0.63
TPM1-216ENST00000558910 BRF2Q9HAW0 419 aa11.1□□□□□ -0.63
TPM1-216ENST00000558910 OXSMQ9NWU1 459 aa11.1□□□□□ -0.63
TPM1-216ENST00000558910 PSD3Q9NYI0 1048 aa11.1□□□□□ -0.63
TPM1-216ENST00000558910 EHD3Q9NZN3 535 aa11.1□□□□□ -0.63
TPM1-216ENST00000558910 TNFRSF10DQ9UBN6 386 aa11.1□□□□□ -0.63
TPM1-216ENST00000558910 UTS2RQ9UKP6 389 aa11.1□□□□□ -0.63
TPM1-216ENST00000558910 PPIEQ9UNP9 301 aaKnown RBP11.1□□□□□ -0.63
TPM1-216ENST00000558910 PCDHA9Q9Y5H5 950 aa11.1□□□□□ -0.63
TPM1-216ENST00000558910 C2orf92A0A1B0GVN3 265 aa11.09□□□□□ -0.63
TPM1-216ENST00000558910 C1orf226A1L170 272 aa11.09□□□□□ -0.63
TPM1-216ENST00000558910 CCDC151A5D8V7 595 aa11.09□□□□□ -0.63
TPM1-216ENST00000558910 TMEM233B4DJY2 109 aa11.09□□□□□ -0.63
TPM1-216ENST00000558910 ASNA1O43681 348 aa11.09□□□□□ -0.63
TPM1-216ENST00000558910 SLC19A2O60779 497 aa11.09□□□□□ -0.63
TPM1-216ENST00000558910 GUCY1B2O75343 617 aa11.09□□□□□ -0.63
TPM1-216ENST00000558910 CLDN1O95832 211 aa11.09□□□□□ -0.63
TPM1-216ENST00000558910 P04436 131 aa11.09□□□□□ -0.63
TPM1-216ENST00000558910 ENO1P06733 434 aaKnown RBP11.09□□□□□ -0.63
TPM1-216ENST00000558910 ANXA4P09525 319 aaPredicted RBP11.09□□□□□ -0.63
TPM1-216ENST00000558910 ALDH3A1P30838 453 aa11.09□□□□□ -0.63
TPM1-216ENST00000558910 PPIAP62937 165 aaKnown RBP11.09□□□□□ -0.63
TPM1-216ENST00000558910 MRPS35P82673 323 aaKnown RBP11.09□□□□□ -0.63
TPM1-216ENST00000558910 SLC18A2Q05940 514 aa11.09□□□□□ -0.63
TPM1-216ENST00000558910 PIGGQ5H8A4 983 aa11.09□□□□□ -0.63
TPM1-216ENST00000558910 LIPMQ5VYY2 423 aa11.09□□□□□ -0.63
TPM1-216ENST00000558910 SLC48A1Q6P1K1 146 aa11.09□□□□□ -0.63
TPM1-216ENST00000558910 EMBQ6PCB8 327 aa11.09□□□□□ -0.63
TPM1-216ENST00000558910 OPN5Q6U736 354 aa11.09□□□□□ -0.63
TPM1-216ENST00000558910 TRABD2AQ86V40 505 aa11.09□□□□□ -0.63
TPM1-216ENST00000558910 OR2M7Q8NG81 312 aa11.09□□□□□ -0.63
TPM1-216ENST00000558910 OR10G3Q8NGC4 313 aa11.09□□□□□ -0.63
TPM1-216ENST00000558910 OR52N2Q8NGI0 321 aa11.09□□□□□ -0.63
TPM1-216ENST00000558910 SLC22A8Q8TCC7 542 aa11.09□□□□□ -0.63
TPM1-216ENST00000558910 TCP10LQ8TDR4 215 aa11.09□□□□□ -0.63
TPM1-216ENST00000558910 C16orf78Q8WTQ4 265 aa11.09□□□□□ -0.63
TPM1-216ENST00000558910 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.09□□□□□ -0.63
TPM1-216ENST00000558910 KAT2AQ92830 837 aa11.09□□□□□ -0.63
TPM1-216ENST00000558910 PKNOX2Q96KN3 472 aa11.09□□□□□ -0.63
TPM1-216ENST00000558910 SMC6Q96SB8 1091 aa11.09□□□□□ -0.63
TPM1-216ENST00000558910 PELOQ9BRX2 385 aaKnown RBP11.09□□□□□ -0.63
TPM1-216ENST00000558910 WWTR1Q9GZV5 400 aa11.09□□□□□ -0.63
TPM1-216ENST00000558910 OR10A5Q9H207 317 aa11.09□□□□□ -0.63
TPM1-216ENST00000558910 PPCSQ9HAB8 311 aa11.09□□□□□ -0.63
TPM1-216ENST00000558910 CXorf21Q9HAI6 301 aa11.09□□□□□ -0.63
TPM1-216ENST00000558910 ADAM29Q9UKF5 820 aa11.09□□□□□ -0.63
TPM1-216ENST00000558910 PPT2Q9UMR5 302 aa11.09□□□□□ -0.63
TPM1-216ENST00000558910 DTX4Q9Y2E6 619 aa11.09□□□□□ -0.63
TPM1-216ENST00000558910 STK38LQ9Y2H1 464 aa11.09□□□□□ -0.63
TPM1-216ENST00000558910 PLLPQ9Y342 182 aa11.09□□□□□ -0.63
TPM1-216ENST00000558910 ZNF780BQ9Y6R6 833 aa11.09□□□□□ -0.63
TPM1-216ENST00000558910 POLEQ07864 2286 aa11.09□□□□□ -0.63
TPM1-216ENST00000558910 MYO7BQ6PIF6 2116 aa11.08□□□□□ -0.64
TPM1-216ENST00000558910 A0A1B0GTH9 108 aa11.08□□□□□ -0.64
TPM1-216ENST00000558910 ATP6AP2A0A1C7CYW4 349 aa11.08□□□□□ -0.64
TPM1-216ENST00000558910 ASPDHA6ND91 283 aa11.08□□□□□ -0.64
TPM1-216ENST00000558910 SYNDIG1LA6NDD5 238 aa11.08□□□□□ -0.64
TPM1-216ENST00000558910 GOLGA6L10A6NI86 522 aa11.08□□□□□ -0.64
TPM1-216ENST00000558910 SEC22BO75396 215 aa11.08□□□□□ -0.64
TPM1-216ENST00000558910 ATP6AP2O75787 350 aa11.08□□□□□ -0.64
TPM1-216ENST00000558910 CLPSP04118 112 aa11.08□□□□□ -0.64
TPM1-216ENST00000558910 IGKV3-11P04433 115 aa11.08□□□□□ -0.64
TPM1-216ENST00000558910 TPOP07202 933 aa11.08□□□□□ -0.64
TPM1-216ENST00000558910 CHRNGP07510 517 aa11.08□□□□□ -0.64
TPM1-216ENST00000558910 NUDT17P0C025 328 aa11.08□□□□□ -0.64
TPM1-216ENST00000558910 LINC00032P0C843 101 aa11.08□□□□□ -0.64
TPM1-216ENST00000558910 GP1BBP13224 206 aa11.08□□□□□ -0.64
TPM1-216ENST00000558910 PCSK2P16519 638 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms