RNA–Protein interactions for RNA: ENST00000558847.1

CASC4-206, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 622 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-206ENST00000558847 H3BTX0 84 aa3.68□□□□□ -1.82
CASC4-206ENST00000558847 NTN3O00634 580 aaPredicted RBP3.68□□□□□ -1.82
CASC4-206ENST00000558847 DCXO43602 365 aa3.68□□□□□ -1.82
CASC4-206ENST00000558847 IDH3BO43837 385 aa3.68□□□□□ -1.82
CASC4-206ENST00000558847 DUSP11O75319 330 aaKnown RBP3.68□□□□□ -1.82
CASC4-206ENST00000558847 ZNF821O75541 412 aaPredicted RBP3.68□□□□□ -1.82
CASC4-206ENST00000558847 IDH1O75874 414 aaKnown RBP3.68□□□□□ -1.82
CASC4-206ENST00000558847 GUCA1CO95843 209 aa3.68□□□□□ -1.82
CASC4-206ENST00000558847 ZSCAN5DPP0CG00 497 aa3.68□□□□□ -1.82
CASC4-206ENST00000558847 PTPN6P29350 595 aa3.68□□□□□ -1.82
CASC4-206ENST00000558847 KIF5BP33176 963 aa3.68□□□□□ -1.82
CASC4-206ENST00000558847 CAPGP40121 348 aa3.68□□□□□ -1.82
CASC4-206ENST00000558847 MTIF2P46199 727 aaKnown RBP3.68□□□□□ -1.82
CASC4-206ENST00000558847 RPS4XP62701 263 aaKnown RBP3.68□□□□□ -1.82
CASC4-206ENST00000558847 ENPP2Q13822 863 aa3.68□□□□□ -1.82
CASC4-206ENST00000558847 EMC2Q15006 297 aa3.68□□□□□ -1.82
CASC4-206ENST00000558847 ZNF146Q15072 292 aa3.68□□□□□ -1.82
CASC4-206ENST00000558847 CEBPEQ15744 281 aa3.68□□□□□ -1.82
CASC4-206ENST00000558847 ZSWIM7Q19AV6 140 aa3.68□□□□□ -1.82
CASC4-206ENST00000558847 ZNF528Q3MIS6 628 aa3.68□□□□□ -1.82
CASC4-206ENST00000558847 RIPPLY2Q5TAB7 128 aa3.68□□□□□ -1.82
CASC4-206ENST00000558847 PAQR9Q6ZVX9 377 aa3.68□□□□□ -1.82
CASC4-206ENST00000558847 ADGRD2Q7Z7M1 963 aa3.68□□□□□ -1.82
CASC4-206ENST00000558847 ZNF781Q8N8C0 355 aa3.68□□□□□ -1.82
CASC4-206ENST00000558847 SAMD12Q8N8I0 201 aa3.68□□□□□ -1.82
CASC4-206ENST00000558847 OR1B1Q8NGR6 318 aa3.68□□□□□ -1.82
CASC4-206ENST00000558847 LRRC15Q8TF66 581 aa3.68□□□□□ -1.82
CASC4-206ENST00000558847 POM121L2Q96KW2 1035 aa3.68□□□□□ -1.82
CASC4-206ENST00000558847 AGAP3Q96P47 875 aa3.68□□□□□ -1.82
CASC4-206ENST00000558847 CPXM1Q96SM3 734 aa3.68□□□□□ -1.82
CASC4-206ENST00000558847 CXXC4Q9H2H0 198 aa3.68□□□□□ -1.82
CASC4-206ENST00000558847 ELL3Q9HB65 397 aaPredicted RBP3.68□□□□□ -1.82
CASC4-206ENST00000558847 GTSE1Q9NYZ3 720 aa3.68□□□□□ -1.82
CASC4-206ENST00000558847 THEGQ9P2T0 379 aa3.68□□□□□ -1.82
CASC4-206ENST00000558847 ATXN10Q9UBB4 475 aa3.68□□□□□ -1.82
CASC4-206ENST00000558847 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP3.68□□□□□ -1.82
CASC4-206ENST00000558847 RAD54L2Q9Y4B4 1467 aa3.67□□□□□ -1.82
CASC4-206ENST00000558847 A0A0A6YYD4 124 aa3.67□□□□□ -1.82
CASC4-206ENST00000558847 NDUFAF8A1L188 74 aa3.67□□□□□ -1.82
CASC4-206ENST00000558847 PDHXO00330 501 aa3.67□□□□□ -1.82
CASC4-206ENST00000558847 PDXKO00764 312 aa3.67□□□□□ -1.82
CASC4-206ENST00000558847 EI24O14681 340 aa3.67□□□□□ -1.82
CASC4-206ENST00000558847 VPS26AO75436 327 aa3.67□□□□□ -1.82
CASC4-206ENST00000558847 MFN2O95140 757 aa3.67□□□□□ -1.82
CASC4-206ENST00000558847 PTBP3O95758 552 aaKnown RBP3.67□□□□□ -1.82
CASC4-206ENST00000558847 AK1P00568 194 aa3.67□□□□□ -1.82
CASC4-206ENST00000558847 IGHG1P01857 330 aa3.67□□□□□ -1.82
CASC4-206ENST00000558847 SLC35G4P0C7Q5 338 aa3.67□□□□□ -1.82
CASC4-206ENST00000558847 DPP4P27487 766 aa3.67□□□□□ -1.82
CASC4-206ENST00000558847 PPP2R1BP30154 601 aa3.67□□□□□ -1.82
CASC4-206ENST00000558847 MDH1P40925 334 aaKnown RBP3.67□□□□□ -1.82
CASC4-206ENST00000558847 TKTL1P51854 596 aa3.67□□□□□ -1.82
CASC4-206ENST00000558847 NAPAP54920 295 aa3.67□□□□□ -1.82
CASC4-206ENST00000558847 RPS27AP62979 156 aaKnown RBP3.67□□□□□ -1.82
CASC4-206ENST00000558847 NOP14P78316 857 aaKnown RBP3.67□□□□□ -1.82
CASC4-206ENST00000558847 IRX1P78414 480 aaPredicted RBP3.67□□□□□ -1.82
CASC4-206ENST00000558847 BNIP1Q12981 228 aa3.67□□□□□ -1.82
CASC4-206ENST00000558847 NFATC2Q13469 925 aa3.67□□□□□ -1.82
CASC4-206ENST00000558847 POM121L1PQ3SYA9 428 aa3.67□□□□□ -1.82
CASC4-206ENST00000558847 C2CD6Q53TS8 623 aa3.67□□□□□ -1.82
CASC4-206ENST00000558847 DNAJC21Q5F1R6 531 aaKnown RBP3.67□□□□□ -1.82
CASC4-206ENST00000558847 LIPKQ5VXJ0 399 aa3.67□□□□□ -1.82
CASC4-206ENST00000558847 ZCCHC12Q6PEW1 402 aa3.67□□□□□ -1.82
CASC4-206ENST00000558847 ZNF613Q6PF04 617 aa3.67□□□□□ -1.82
CASC4-206ENST00000558847 ABRAXAS1Q6UWZ7 409 aa3.67□□□□□ -1.82
CASC4-206ENST00000558847 MOB2Q70IA6 237 aa3.67□□□□□ -1.82
CASC4-206ENST00000558847 NUFIP2Q7Z417 695 aaKnown RBP3.67□□□□□ -1.82
CASC4-206ENST00000558847 P4HA3Q7Z4N8 544 aa3.67□□□□□ -1.82
CASC4-206ENST00000558847 KCNMB4Q86W47 210 aa3.67□□□□□ -1.82
CASC4-206ENST00000558847 FAM131BQ86XD5 332 aa3.67□□□□□ -1.82
CASC4-206ENST00000558847 CATSPER3Q86XQ3 398 aa3.67□□□□□ -1.82
CASC4-206ENST00000558847 LMNTD2Q8IXW0 634 aa3.67□□□□□ -1.82
CASC4-206ENST00000558847 ARL6IP6Q8N6S5 226 aa3.67□□□□□ -1.82
CASC4-206ENST00000558847 ZNF397Q8NF99 534 aaPredicted RBP3.67□□□□□ -1.82
CASC4-206ENST00000558847 OR52B4Q8NGK2 314 aa3.67□□□□□ -1.82
CASC4-206ENST00000558847 WDR36Q8NI36 951 aaKnown RBP3.67□□□□□ -1.82
CASC4-206ENST00000558847 CCDC51Q96ER9 411 aa3.67□□□□□ -1.82
CASC4-206ENST00000558847 RCHY1Q96PM5 261 aa3.67□□□□□ -1.82
CASC4-206ENST00000558847 NLNQ9BYT8 704 aa3.67□□□□□ -1.82
CASC4-206ENST00000558847 OCR1Q9BZK8 76 aa3.67□□□□□ -1.82
CASC4-206ENST00000558847 RIBC2Q9H4K1 309 aa3.67□□□□□ -1.82
CASC4-206ENST00000558847 NT5DC2Q9H857 520 aa3.67□□□□□ -1.82
CASC4-206ENST00000558847 PANK3Q9H999 370 aa3.67□□□□□ -1.82
CASC4-206ENST00000558847 LIN28AQ9H9Z2 209 aaKnown RBP3.67□□□□□ -1.82
CASC4-206ENST00000558847 IL1RAPQ9NPH3 570 aa3.67□□□□□ -1.82
CASC4-206ENST00000558847 SCRT2Q9NQ03 307 aa3.67□□□□□ -1.82
CASC4-206ENST00000558847 SDAD1Q9NVU7 687 aaKnown RBP eCLIP3.67□□□□□ -1.82
CASC4-206ENST00000558847 SEC14L4Q9UDX3 406 aa3.67□□□□□ -1.82
CASC4-206ENST00000558847 IKZF3Q9UKT9 509 aa3.67□□□□□ -1.82
CASC4-206ENST00000558847 CHMP2BQ9UQN3 213 aa3.67□□□□□ -1.82
CASC4-206ENST00000558847 FKBP7Q9Y680 259 aa3.67□□□□□ -1.82
CASC4-206ENST00000558847 SYNJ2O15056 1496 aa3.67□□□□□ -1.82
CASC4-206ENST00000558847 IGLV4-3A0A075B6K6 122 aa3.66□□□□□ -1.82
CASC4-206ENST00000558847 TRGV8A0A0C4DH27 118 aa3.66□□□□□ -1.82
CASC4-206ENST00000558847 ZNF724A8MTY0 619 aa3.66□□□□□ -1.82
CASC4-206ENST00000558847 ARHGEF33A8MVX0 844 aa3.66□□□□□ -1.82
CASC4-206ENST00000558847 K7EPI3 171 aa3.66□□□□□ -1.82
CASC4-206ENST00000558847 CYB561D2O14569 222 aa3.66□□□□□ -1.82
CASC4-206ENST00000558847 ANGPT2O15123 496 aa3.66□□□□□ -1.82
CASC4-206ENST00000558847 PEX11AO75192 247 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms