RNA–Protein interactions for RNA: ENST00000558763.1

SMAD3-207, Transcript of SMAD family member 3, humanhuman

TSL 2

Gene SMAD3, Length 1,957 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-207ENST00000558763 THSD1Q9NS62 852 aa12.17□□□□□ -0.46
SMAD3-207ENST00000558763 PNPLA3Q9NST1 481 aa12.17□□□□□ -0.46
SMAD3-207ENST00000558763 STARD5Q9NSY2 213 aa12.17□□□□□ -0.46
SMAD3-207ENST00000558763 TRIM64A6NGJ6 449 aa12.16□□□□□ -0.46
SMAD3-207ENST00000558763 SLC9B1P1A6NJY1 282 aa12.16□□□□□ -0.46
SMAD3-207ENST00000558763 C4orf47A7E2U8 309 aa12.16□□□□□ -0.46
SMAD3-207ENST00000558763 CYR61O00622 381 aa12.16□□□□□ -0.46
SMAD3-207ENST00000558763 CASC3O15234 703 aaKnown RBP12.16□□□□□ -0.46
SMAD3-207ENST00000558763 FLRT2O43155 660 aa12.16□□□□□ -0.46
SMAD3-207ENST00000558763 PGM3O95394 542 aa12.16□□□□□ -0.46
SMAD3-207ENST00000558763 HMGN2P05204 90 aaKnown RBP12.16□□□□□ -0.46
SMAD3-207ENST00000558763 LINGO3P0C6S8 592 aa12.16□□□□□ -0.46
SMAD3-207ENST00000558763 OR12D1P0DN82 309 aa12.16□□□□□ -0.46
SMAD3-207ENST00000558763 FPR1P21462 350 aa12.16□□□□□ -0.46
SMAD3-207ENST00000558763 FUT4P22083 530 aa12.16□□□□□ -0.46
SMAD3-207ENST00000558763 TGM1P22735 817 aa12.16□□□□□ -0.46
SMAD3-207ENST00000558763 CPN2P22792 545 aa12.16□□□□□ -0.46
SMAD3-207ENST00000558763 GPC1P35052 558 aa12.16□□□□□ -0.46
SMAD3-207ENST00000558763 BUD31P41223 144 aaPredicted RBP12.16□□□□□ -0.46
SMAD3-207ENST00000558763 MC3RP41968 323 aa12.16□□□□□ -0.46
SMAD3-207ENST00000558763 MAN2A2P49641 1150 aa12.16□□□□□ -0.46
SMAD3-207ENST00000558763 GFERP55789 205 aa12.16□□□□□ -0.46
SMAD3-207ENST00000558763 OR1D5P58170 312 aa12.16□□□□□ -0.46
SMAD3-207ENST00000558763 DAB2P98082 770 aa12.16□□□□□ -0.46
SMAD3-207ENST00000558763 PUM1Q14671 1186 aaKnown RBP eCLIP12.16□□□□□ -0.46
SMAD3-207ENST00000558763 SYPL1Q16563 259 aa12.16□□□□□ -0.46
SMAD3-207ENST00000558763 DUSP7Q16829 419 aa12.16□□□□□ -0.46
SMAD3-207ENST00000558763 PRTGQ2VWP7 1150 aa12.16□□□□□ -0.46
SMAD3-207ENST00000558763 INAVAQ3KP66 663 aa12.16□□□□□ -0.46
SMAD3-207ENST00000558763 ZIK1Q3SY52 487 aaPredicted RBP12.16□□□□□ -0.46
SMAD3-207ENST00000558763 CYP27C1Q4G0S4 372 aa12.16□□□□□ -0.46
SMAD3-207ENST00000558763 NKAIN2Q5VXU1 208 aa12.16□□□□□ -0.46
SMAD3-207ENST00000558763 PATL1Q86TB9 770 aaKnown RBP12.16□□□□□ -0.46
SMAD3-207ENST00000558763 HIPK1Q86Z02 1210 aa12.16□□□□□ -0.46
SMAD3-207ENST00000558763 OFCC1Q8IZS5 231 aa12.16□□□□□ -0.46
SMAD3-207ENST00000558763 FAM181AQ8N9Y4 354 aa12.16□□□□□ -0.46
SMAD3-207ENST00000558763 SMYD1Q8NB12 490 aa12.16□□□□□ -0.46
SMAD3-207ENST00000558763 ELP4Q96EB1 424 aa12.16□□□□□ -0.46
SMAD3-207ENST00000558763 ZNF285Q96NJ3 590 aa12.16□□□□□ -0.46
SMAD3-207ENST00000558763 SEMA3GQ9NS98 782 aa12.16□□□□□ -0.46
SMAD3-207ENST00000558763 NTMQ9P121 344 aa12.16□□□□□ -0.46
SMAD3-207ENST00000558763 IFT80Q9P2H3 777 aaPredicted RBP12.16□□□□□ -0.46
SMAD3-207ENST00000558763 NAALAD2Q9Y3Q0 740 aa12.16□□□□□ -0.46
SMAD3-207ENST00000558763 PCDHGB2Q9Y5G2 931 aa12.16□□□□□ -0.46
SMAD3-207ENST00000558763 EME2A4GXA9 379 aaPredicted RBP12.16□□□□□ -0.46
SMAD3-207ENST00000558763 H3BNH8 94 aa12.16□□□□□ -0.46
SMAD3-207ENST00000558763 E2F6O75461 281 aa12.16□□□□□ -0.46
SMAD3-207ENST00000558763 MFN2O95140 757 aa12.16□□□□□ -0.46
SMAD3-207ENST00000558763 FHP07954 510 aa12.16□□□□□ -0.46
SMAD3-207ENST00000558763 CDH3P22223 829 aa12.16□□□□□ -0.46
SMAD3-207ENST00000558763 DNAJA1P31689 397 aaKnown RBP12.16□□□□□ -0.46
SMAD3-207ENST00000558763 MAGEA8P43361 318 aa12.16□□□□□ -0.46
SMAD3-207ENST00000558763 OR1E2P47887 323 aa12.16□□□□□ -0.46
SMAD3-207ENST00000558763 SIM1P81133 766 aaPredicted RBP12.16□□□□□ -0.46
SMAD3-207ENST00000558763 PROX2Q3B8N5 592 aa12.16□□□□□ -0.46
SMAD3-207ENST00000558763 AMZ1Q400G9 498 aa12.16□□□□□ -0.46
SMAD3-207ENST00000558763 IFI44LQ53G44 452 aa12.16□□□□□ -0.46
SMAD3-207ENST00000558763 ARMC6Q6NXE6 501 aa12.16□□□□□ -0.46
SMAD3-207ENST00000558763 ASCL5Q7RTU5 278 aa12.16□□□□□ -0.46
SMAD3-207ENST00000558763 CA13Q8N1Q1 262 aa12.16□□□□□ -0.46
SMAD3-207ENST00000558763 RHBDD1Q8TEB9 315 aa12.16□□□□□ -0.46
SMAD3-207ENST00000558763 OTUB1Q96FW1 271 aaPredicted RBP12.16□□□□□ -0.46
SMAD3-207ENST00000558763 C16orf58Q96GQ5 468 aa12.16□□□□□ -0.46
SMAD3-207ENST00000558763 ZNF300Q96RE9 604 aaPredicted RBP12.16□□□□□ -0.46
SMAD3-207ENST00000558763 TREX2Q9BQ50 279 aaPredicted RBP12.16□□□□□ -0.46
SMAD3-207ENST00000558763 ASCC3Q8N3C0 2202 aaKnown RBP12.15□□□□□ -0.46
SMAD3-207ENST00000558763 ADAMTS20P59510 1910 aa12.15□□□□□ -0.46
SMAD3-207ENST00000558763 SEMA7AO75326 666 aa12.15□□□□□ -0.46
SMAD3-207ENST00000558763 H6PDO95479 791 aa12.15□□□□□ -0.46
SMAD3-207ENST00000558763 TFAP2AP05549 437 aa12.15□□□□□ -0.46
SMAD3-207ENST00000558763 CD59P13987 128 aa12.15□□□□□ -0.46
SMAD3-207ENST00000558763 MATN1P21941 496 aa12.15□□□□□ -0.46
SMAD3-207ENST00000558763 MPIP34949 423 aa12.15□□□□□ -0.46
SMAD3-207ENST00000558763 DAPP51397 102 aa12.15□□□□□ -0.46
SMAD3-207ENST00000558763 NHLH1Q02575 133 aa12.15□□□□□ -0.46
SMAD3-207ENST00000558763 LASP1Q14847 261 aaKnown RBP12.15□□□□□ -0.46
SMAD3-207ENST00000558763 PERM1Q5SV97 790 aa12.15□□□□□ -0.46
SMAD3-207ENST00000558763 KDM4DQ6B0I6 523 aa12.15□□□□□ -0.46
SMAD3-207ENST00000558763 FAM111BQ6SJ93 734 aa12.15□□□□□ -0.46
SMAD3-207ENST00000558763 USP53Q70EK8 1073 aa12.15□□□□□ -0.46
SMAD3-207ENST00000558763 OLIG3Q7RTU3 272 aa12.15□□□□□ -0.46
SMAD3-207ENST00000558763 ZNF605Q86T29 641 aa12.15□□□□□ -0.46
SMAD3-207ENST00000558763 COMTD1Q86VU5 262 aa12.15□□□□□ -0.46
SMAD3-207ENST00000558763 ARMC8Q8IUR7 673 aa12.15□□□□□ -0.46
SMAD3-207ENST00000558763 NAXDQ8IW45 347 aa12.15□□□□□ -0.46
SMAD3-207ENST00000558763 OR4N5Q8IXE1 308 aa12.15□□□□□ -0.46
SMAD3-207ENST00000558763 ST13P4Q8IZP2 240 aaPredicted RBP12.15□□□□□ -0.46
SMAD3-207ENST00000558763 ZNF655Q8N720 491 aaPredicted RBP12.15□□□□□ -0.46
SMAD3-207ENST00000558763 SIMC1Q8NDZ2 872 aa12.15□□□□□ -0.46
SMAD3-207ENST00000558763 OR7G2Q8NG99 324 aa12.15□□□□□ -0.46
SMAD3-207ENST00000558763 OR56A1Q8NGH5 318 aa12.15□□□□□ -0.46
SMAD3-207ENST00000558763 OR4C15Q8NGM1 316 aa12.15□□□□□ -0.46
SMAD3-207ENST00000558763 MOAP1Q96BY2 351 aa12.15□□□□□ -0.46
SMAD3-207ENST00000558763 SDCCAG3Q96C92 435 aa12.15□□□□□ -0.46
SMAD3-207ENST00000558763 NRBF2Q96F24 287 aa12.15□□□□□ -0.46
SMAD3-207ENST00000558763 AHCYL2Q96HN2 611 aaKnown RBP12.15□□□□□ -0.46
SMAD3-207ENST00000558763 EPYCQ99645 322 aa12.15□□□□□ -0.46
SMAD3-207ENST00000558763 THUMPD1Q9NXG2 353 aaKnown RBP12.15□□□□□ -0.46
SMAD3-207ENST00000558763 MS4A12Q9NXJ0 267 aa12.15□□□□□ -0.46
SMAD3-207ENST00000558763 SAMHD1Q9Y3Z3 626 aaKnown RBP12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms