RNA–Protein interactions for RNA: ENST00000558655.5

ZEB1-212, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 2

Gene ZEB1, Length 2,773 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-212ENST00000558655 RCN3Q96D15 328 aa3.86□□□□□ -1.79
ZEB1-212ENST00000558655 PERPQ96FX8 193 aa3.86□□□□□ -1.79
ZEB1-212ENST00000558655 HIST1H2AHQ96KK5 128 aa3.86□□□□□ -1.79
ZEB1-212ENST00000558655 PTCHD1Q96NR3 888 aa3.86□□□□□ -1.79
ZEB1-212ENST00000558655 ZNF382Q96SR6 550 aa3.86□□□□□ -1.79
ZEB1-212ENST00000558655 SECISBP2Q96T21 854 aaKnown RBP3.86□□□□□ -1.79
ZEB1-212ENST00000558655 HIST1H2AJQ99878 128 aa3.86□□□□□ -1.79
ZEB1-212ENST00000558655 H2AFJQ9BTM1 129 aa3.86□□□□□ -1.79
ZEB1-212ENST00000558655 GON7Q9BXV9 100 aa3.86□□□□□ -1.79
ZEB1-212ENST00000558655 SLC29A3Q9BZD2 475 aa3.86□□□□□ -1.79
ZEB1-212ENST00000558655 RAD21L1Q9H4I0 556 aa3.86□□□□□ -1.79
ZEB1-212ENST00000558655 IL1RL2Q9HB29 575 aa3.86□□□□□ -1.79
ZEB1-212ENST00000558655 IL21RQ9HBE5 538 aa3.86□□□□□ -1.79
ZEB1-212ENST00000558655 C8orf4Q9NR00 106 aa3.86□□□□□ -1.79
ZEB1-212ENST00000558655 CORINQ9Y5Q5 1042 aa3.86□□□□□ -1.79
ZEB1-212ENST00000558655 CACNA1HO95180 2353 aa3.86□□□□□ -1.79
ZEB1-212ENST00000558655 LOC100506127A0A0U1RQW1 187 aa3.85□□□□□ -1.79
ZEB1-212ENST00000558655 MEX3AA1L020 520 aaKnown RBP3.85□□□□□ -1.79
ZEB1-212ENST00000558655 PATE3B3GLJ2 98 aa3.85□□□□□ -1.79
ZEB1-212ENST00000558655 SUPT3HB4E1H0 165 aa3.85□□□□□ -1.79
ZEB1-212ENST00000558655 NTN3O00634 580 aaPredicted RBP3.85□□□□□ -1.79
ZEB1-212ENST00000558655 CASC3O15234 703 aaKnown RBP3.85□□□□□ -1.79
ZEB1-212ENST00000558655 SIAH2O43255 324 aa3.85□□□□□ -1.79
ZEB1-212ENST00000558655 SUPT3HO75486 399 aa3.85□□□□□ -1.79
ZEB1-212ENST00000558655 CIB2O75838 187 aa3.85□□□□□ -1.79
ZEB1-212ENST00000558655 WFS1O76024 890 aa3.85□□□□□ -1.79
ZEB1-212ENST00000558655 WDR47O94967 919 aa3.85□□□□□ -1.79
ZEB1-212ENST00000558655 CFIP05156 583 aa3.85□□□□□ -1.79
ZEB1-212ENST00000558655 ALPPP05187 535 aa3.85□□□□□ -1.79
ZEB1-212ENST00000558655 CLEC3BP05452 202 aa3.85□□□□□ -1.79
ZEB1-212ENST00000558655 AGXTP21549 392 aa3.85□□□□□ -1.79
ZEB1-212ENST00000558655 AHCYP23526 432 aa3.85□□□□□ -1.79
ZEB1-212ENST00000558655 PEBP1P30086 187 aaKnown RBP3.85□□□□□ -1.79
ZEB1-212ENST00000558655 VHLP40337 213 aa3.85□□□□□ -1.79
ZEB1-212ENST00000558655 BNIP3Q12983 259 aa3.85□□□□□ -1.79
ZEB1-212ENST00000558655 IRF3Q14653 427 aa3.85□□□□□ -1.79
ZEB1-212ENST00000558655 ZMYND11Q15326 602 aa3.85□□□□□ -1.79
ZEB1-212ENST00000558655 MED22Q15528 200 aa3.85□□□□□ -1.79
ZEB1-212ENST00000558655 MEP1BQ16820 701 aa3.85□□□□□ -1.79
ZEB1-212ENST00000558655 LSM12Q3MHD2 195 aaKnown RBP3.85□□□□□ -1.79
ZEB1-212ENST00000558655 CCSMST1Q4G0I0 132 aa3.85□□□□□ -1.79
ZEB1-212ENST00000558655 ZNF425Q6IV72 752 aa3.85□□□□□ -1.79
ZEB1-212ENST00000558655 SCIMPQ6UWF3 145 aa3.85□□□□□ -1.79
ZEB1-212ENST00000558655 FRA10AC1Q70Z53 315 aa3.85□□□□□ -1.79
ZEB1-212ENST00000558655 KMT5CQ86Y97 462 aa3.85□□□□□ -1.79
ZEB1-212ENST00000558655 PTGR2Q8N8N7 351 aaPredicted RBP3.85□□□□□ -1.79
ZEB1-212ENST00000558655 LINC01555Q8NAE3 123 aa3.85□□□□□ -1.79
ZEB1-212ENST00000558655 ESAMQ96AP7 390 aa3.85□□□□□ -1.79
ZEB1-212ENST00000558655 CXorf40BQ96DE9 158 aa3.85□□□□□ -1.79
ZEB1-212ENST00000558655 OR1F2PQ96R84 312 aa3.85□□□□□ -1.79
ZEB1-212ENST00000558655 SLC5A7Q9GZV3 580 aa3.85□□□□□ -1.79
ZEB1-212ENST00000558655 RNF32Q9H0A6 362 aa3.85□□□□□ -1.79
ZEB1-212ENST00000558655 TMEM9BQ9NQ34 198 aa3.85□□□□□ -1.79
ZEB1-212ENST00000558655 DNAJC11Q9NVH1 559 aa3.85□□□□□ -1.79
ZEB1-212ENST00000558655 CNIH4Q9P003 139 aa3.85□□□□□ -1.79
ZEB1-212ENST00000558655 STOML1Q9UBI4 398 aa3.85□□□□□ -1.79
ZEB1-212ENST00000558655 POMT2Q9UKY4 750 aa3.85□□□□□ -1.79
ZEB1-212ENST00000558655 HSF4Q9ULV5 492 aa3.85□□□□□ -1.79
ZEB1-212ENST00000558655 ASF1AQ9Y294 204 aa3.85□□□□□ -1.79
ZEB1-212ENST00000558655 KCNK7Q9Y2U2 307 aa3.85□□□□□ -1.79
ZEB1-212ENST00000558655 LRRC42Q9Y546 428 aa3.85□□□□□ -1.79
ZEB1-212ENST00000558655 RNF215Q9Y6U7 377 aa3.85□□□□□ -1.79
ZEB1-212ENST00000558655 MYO15AQ9UKN7 3530 aa3.85□□□□□ -1.79
ZEB1-212ENST00000558655 OR5K3A6NET4 321 aa3.85□□□□□ -1.79
ZEB1-212ENST00000558655 PDZK1P1A8MUH7 402 aa3.85□□□□□ -1.79
ZEB1-212ENST00000558655 AHRRA9YTQ3 701 aa3.85□□□□□ -1.79
ZEB1-212ENST00000558655 OR7A17O14581 309 aa3.85□□□□□ -1.79
ZEB1-212ENST00000558655 PPM1DO15297 605 aa3.85□□□□□ -1.79
ZEB1-212ENST00000558655 SIGLEC6O43699 453 aa3.85□□□□□ -1.79
ZEB1-212ENST00000558655 PEX1O43933 1283 aa3.85□□□□□ -1.79
ZEB1-212ENST00000558655 STK16O75716 305 aa3.85□□□□□ -1.79
ZEB1-212ENST00000558655 SLC16A8O95907 504 aa3.85□□□□□ -1.79
ZEB1-212ENST00000558655 VIPP01282 170 aa3.85□□□□□ -1.79
ZEB1-212ENST00000558655 PRB1P04280 392 aa3.85□□□□□ -1.79
ZEB1-212ENST00000558655 FHP07954 510 aa3.85□□□□□ -1.79
ZEB1-212ENST00000558655 CHRM5P08912 532 aaPredicted RBP3.85□□□□□ -1.79
ZEB1-212ENST00000558655 COX4I1P13073 169 aa3.85□□□□□ -1.79
ZEB1-212ENST00000558655 CPN2P22792 545 aa3.85□□□□□ -1.79
ZEB1-212ENST00000558655 CFL1P23528 166 aaKnown RBP3.85□□□□□ -1.79
ZEB1-212ENST00000558655 PRPH2P23942 346 aa3.85□□□□□ -1.79
ZEB1-212ENST00000558655 RPL10P27635 214 aaKnown RBP3.85□□□□□ -1.79
ZEB1-212ENST00000558655 PCGF2P35227 344 aa3.85□□□□□ -1.79
ZEB1-212ENST00000558655 CAPZBP47756 277 aa3.85□□□□□ -1.79
ZEB1-212ENST00000558655 RPS3AP61247 264 aaKnown RBP3.85□□□□□ -1.79
ZEB1-212ENST00000558655 REEP5Q00765 189 aa3.85□□□□□ -1.79
ZEB1-212ENST00000558655 HHEXQ03014 270 aa3.85□□□□□ -1.79
ZEB1-212ENST00000558655 LCP2Q13094 533 aa3.85□□□□□ -1.79
ZEB1-212ENST00000558655 TRAF3Q13114 568 aa3.85□□□□□ -1.79
ZEB1-212ENST00000558655 KLF10Q13118 480 aa3.85□□□□□ -1.79
ZEB1-212ENST00000558655 GPR18Q14330 331 aa3.85□□□□□ -1.79
ZEB1-212ENST00000558655 SEC23BQ15437 767 aa3.85□□□□□ -1.79
ZEB1-212ENST00000558655 TRIP10Q15642 601 aa3.85□□□□□ -1.79
ZEB1-212ENST00000558655 PRSS53Q2L4Q9 553 aa3.85□□□□□ -1.79
ZEB1-212ENST00000558655 PLA1AQ53H76 456 aa3.85□□□□□ -1.79
ZEB1-212ENST00000558655 ZNF542PQ5EBM4 170 aa3.85□□□□□ -1.79
ZEB1-212ENST00000558655 LIPJQ5W064 366 aa3.85□□□□□ -1.79
ZEB1-212ENST00000558655 ATG9BQ674R7 924 aa3.85□□□□□ -1.79
ZEB1-212ENST00000558655 GRHL2Q6ISB3 625 aa3.85□□□□□ -1.79
ZEB1-212ENST00000558655 CAPN13Q6MZZ7 669 aaPredicted RBP3.85□□□□□ -1.79
ZEB1-212ENST00000558655 KLHL35Q6PF15 583 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms