RNA–Protein interactions for RNA: ENST00000558428.5

SMAD3-205, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-205ENST00000558428 CD46P15529 392 aa11.45□□□□□ -0.58
SMAD3-205ENST00000558428 PCSK2P16519 638 aa11.45□□□□□ -0.58
SMAD3-205ENST00000558428 MPIP34949 423 aa11.45□□□□□ -0.58
SMAD3-205ENST00000558428 NCBP2P52298 156 aaKnown RBP eCLIP11.45□□□□□ -0.58
SMAD3-205ENST00000558428 MRPS35P82673 323 aaKnown RBP11.45□□□□□ -0.58
SMAD3-205ENST00000558428 OCRLQ01968 901 aa11.45□□□□□ -0.58
SMAD3-205ENST00000558428 MGAT2Q10469 447 aa11.45□□□□□ -0.58
SMAD3-205ENST00000558428 MAP4K2Q12851 820 aa11.45□□□□□ -0.58
SMAD3-205ENST00000558428 MAD2L1Q13257 205 aaPredicted RBP11.45□□□□□ -0.58
SMAD3-205ENST00000558428 EBPQ15125 230 aaKnown RBP11.45□□□□□ -0.58
SMAD3-205ENST00000558428 CEBPEQ15744 281 aa11.45□□□□□ -0.58
SMAD3-205ENST00000558428 PRSS53Q2L4Q9 553 aa11.45□□□□□ -0.58
SMAD3-205ENST00000558428 TRMT12Q53H54 448 aaKnown RBP11.45□□□□□ -0.58
SMAD3-205ENST00000558428 IL23RQ5VWK5 629 aa11.45□□□□□ -0.58
SMAD3-205ENST00000558428 ANKRD26P1Q6NSI1 321 aa11.45□□□□□ -0.58
SMAD3-205ENST00000558428 RPUSD3Q6P087 351 aaKnown RBP11.45□□□□□ -0.58
SMAD3-205ENST00000558428 CYP4Z2PQ8N1L4 340 aa11.45□□□□□ -0.58
SMAD3-205ENST00000558428 ZNF615Q8N8J6 731 aa11.45□□□□□ -0.58
SMAD3-205ENST00000558428 MDS2Q8NDY4 140 aa11.45□□□□□ -0.58
SMAD3-205ENST00000558428 OR7G1Q8NGA0 311 aa11.45□□□□□ -0.58
SMAD3-205ENST00000558428 OR9A2Q8NGT5 310 aa11.45□□□□□ -0.58
SMAD3-205ENST00000558428 ZNF675Q8TD23 568 aa11.45□□□□□ -0.58
SMAD3-205ENST00000558428 LRRC8CQ8TDW0 803 aa11.45□□□□□ -0.58
SMAD3-205ENST00000558428 PPCDCQ96CD2 204 aa11.45□□□□□ -0.58
SMAD3-205ENST00000558428 CTHRC1Q96CG8 243 aa11.45□□□□□ -0.58
SMAD3-205ENST00000558428 SNRNP40Q96DI7 357 aaKnown RBP11.45□□□□□ -0.58
SMAD3-205ENST00000558428 C5orf34Q96MH7 638 aa11.45□□□□□ -0.58
SMAD3-205ENST00000558428 WWTR1Q9GZV5 400 aa11.45□□□□□ -0.58
SMAD3-205ENST00000558428 REEP4Q9H6H4 257 aa11.45□□□□□ -0.58
SMAD3-205ENST00000558428 AKTIPQ9H8T0 292 aa11.45□□□□□ -0.58
SMAD3-205ENST00000558428 KLHL1Q9NR64 748 aa11.45□□□□□ -0.58
SMAD3-205ENST00000558428 INTS9Q9NV88 658 aaKnown RBP11.45□□□□□ -0.58
SMAD3-205ENST00000558428 HPF1Q9NWY4 346 aa11.45□□□□□ -0.58
SMAD3-205ENST00000558428 TAS2R7Q9NYW3 318 aa11.45□□□□□ -0.58
SMAD3-205ENST00000558428 BCAP29Q9UHQ4 241 aa11.45□□□□□ -0.58
SMAD3-205ENST00000558428 EIF3LQ9Y262 564 aaKnown RBP11.45□□□□□ -0.58
SMAD3-205ENST00000558428 COPG1Q9Y678 874 aaKnown RBP11.45□□□□□ -0.58
SMAD3-205ENST00000558428 ZGRF1Q86YA3 2104 aa11.45□□□□□ -0.58
SMAD3-205ENST00000558428 C2orf92A0A1B0GVN3 265 aa11.44□□□□□ -0.58
SMAD3-205ENST00000558428 MYO1GB0I1T2 1018 aa11.44□□□□□ -0.58
SMAD3-205ENST00000558428 PYCARD-AS1I3L0S3 204 aa11.44□□□□□ -0.58
SMAD3-205ENST00000558428 PDPK1O15530 556 aa11.44□□□□□ -0.58
SMAD3-205ENST00000558428 VPS4BO75351 444 aa11.44□□□□□ -0.58
SMAD3-205ENST00000558428 SLC25A12O75746 678 aa11.44□□□□□ -0.58
SMAD3-205ENST00000558428 NEURL1O76050 574 aa11.44□□□□□ -0.58
SMAD3-205ENST00000558428 S1PR1P21453 382 aa11.44□□□□□ -0.58
SMAD3-205ENST00000558428 SOX18P35713 384 aa11.44□□□□□ -0.58
SMAD3-205ENST00000558428 HPCAL1P37235 193 aa11.44□□□□□ -0.58
SMAD3-205ENST00000558428 SOX3P41225 446 aa11.44□□□□□ -0.58
SMAD3-205ENST00000558428 EMX2Q04743 252 aa11.44□□□□□ -0.58
SMAD3-205ENST00000558428 EXOSC7Q15024 291 aaKnown RBP11.44□□□□□ -0.58
SMAD3-205ENST00000558428 IGFBP7Q16270 282 aa11.44□□□□□ -0.58
SMAD3-205ENST00000558428 INAQ16352 499 aa11.44□□□□□ -0.58
SMAD3-205ENST00000558428 MPEG1Q2M385 716 aa11.44□□□□□ -0.58
SMAD3-205ENST00000558428 SMU1Q2TAY7 513 aa11.44□□□□□ -0.58
SMAD3-205ENST00000558428 ZNF385BQ569K4 471 aa11.44□□□□□ -0.58
SMAD3-205ENST00000558428 ZNF628Q5EBL2 1059 aa11.44□□□□□ -0.58
SMAD3-205ENST00000558428 PIGGQ5H8A4 983 aa11.44□□□□□ -0.58
SMAD3-205ENST00000558428 HLA-DQA1Q5Y7H0 255 aa11.44□□□□□ -0.58
SMAD3-205ENST00000558428 IL20RBQ6UXL0 311 aa11.44□□□□□ -0.58
SMAD3-205ENST00000558428 R3HCC1LQ7Z5L2 792 aaKnown RBP11.44□□□□□ -0.58
SMAD3-205ENST00000558428 TMEM178AQ8NBL3 297 aa11.44□□□□□ -0.58
SMAD3-205ENST00000558428 OR52R1Q8NGF1 315 aa11.44□□□□□ -0.58
SMAD3-205ENST00000558428 C16orf52Q8NHV5 167 aa11.44□□□□□ -0.58
SMAD3-205ENST00000558428 SLC22A8Q8TCC7 542 aa11.44□□□□□ -0.58
SMAD3-205ENST00000558428 KAT2AQ92830 837 aa11.44□□□□□ -0.58
SMAD3-205ENST00000558428 TMEM125Q96AQ2 219 aa11.44□□□□□ -0.58
SMAD3-205ENST00000558428 HES7Q9BYE0 225 aa11.44□□□□□ -0.58
SMAD3-205ENST00000558428 GLIPR2Q9H4G4 154 aa11.44□□□□□ -0.58
SMAD3-205ENST00000558428 TRIM45Q9H8W5 580 aaPredicted RBP11.44□□□□□ -0.58
SMAD3-205ENST00000558428 MEAF6Q9HAF1 191 aa11.44□□□□□ -0.58
SMAD3-205ENST00000558428 ASF1BQ9NVP2 202 aa11.44□□□□□ -0.58
SMAD3-205ENST00000558428 NOP53Q9NZM5 478 aaKnown RBP11.44□□□□□ -0.58
SMAD3-205ENST00000558428 SH3BP4Q9P0V3 963 aa11.44□□□□□ -0.58
SMAD3-205ENST00000558428 ZNF639Q9UID6 485 aa11.44□□□□□ -0.58
SMAD3-205ENST00000558428 ERVK-11Q9UQG0 969 aa11.44□□□□□ -0.58
SMAD3-205ENST00000558428 CFL2Q9Y281 166 aa11.44□□□□□ -0.58
SMAD3-205ENST00000558428 PCDHGB6Q9Y5F9 930 aa11.44□□□□□ -0.58
SMAD3-205ENST00000558428 ESPL1Q14674 2120 aa11.44□□□□□ -0.58
SMAD3-205ENST00000558428 TRPC5OSA6NMA1 111 aa11.43□□□□□ -0.58
SMAD3-205ENST00000558428 SLCO1B7G3V0H7 640 aa11.43□□□□□ -0.58
SMAD3-205ENST00000558428 J3QKU1 62 aa11.43□□□□□ -0.58
SMAD3-205ENST00000558428 SDHDO14521 159 aa11.43□□□□□ -0.58
SMAD3-205ENST00000558428 SCAMP2O15127 329 aaKnown RBP11.43□□□□□ -0.58
SMAD3-205ENST00000558428 HDAC3O15379 428 aa11.43□□□□□ -0.58
SMAD3-205ENST00000558428 ZNF354AO60765 605 aaPredicted RBP11.43□□□□□ -0.58
SMAD3-205ENST00000558428 TBX19O60806 448 aa11.43□□□□□ -0.58
SMAD3-205ENST00000558428 BCAS2O75934 225 aaPredicted RBP11.43□□□□□ -0.58
SMAD3-205ENST00000558428 OR6B1O95007 311 aa11.43□□□□□ -0.58
SMAD3-205ENST00000558428 RASAL1O95294 804 aa11.43□□□□□ -0.58
SMAD3-205ENST00000558428 CBX7O95931 251 aa11.43□□□□□ -0.58
SMAD3-205ENST00000558428 SP1P08047 785 aa11.43□□□□□ -0.58
SMAD3-205ENST00000558428 G6PDP11413 515 aa11.43□□□□□ -0.58
SMAD3-205ENST00000558428 DDX5P17844 614 aaKnown RBP11.43□□□□□ -0.58
SMAD3-205ENST00000558428 LBPP18428 481 aa11.43□□□□□ -0.58
SMAD3-205ENST00000558428 RPL3P39023 403 aaKnown RBP11.43□□□□□ -0.58
SMAD3-205ENST00000558428 NR0B1P51843 470 aaKnown RBP11.43□□□□□ -0.58
SMAD3-205ENST00000558428 DUSP8Q13202 625 aa11.43□□□□□ -0.58
SMAD3-205ENST00000558428 PDE7AQ13946 482 aa11.43□□□□□ -0.58
SMAD3-205ENST00000558428 PTGR1Q14914 329 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms