RNA–Protein interactions for RNA: ENST00000558319.5

SPG11-210, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SPG11, Length 6,426 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-210ENST00000558319 GRIN2CQ14957 1233 aa13.35□□□□□ -0.27
SPG11-210ENST00000558319 ZSWIM9Q86XI8 627 aa13.35□□□□□ -0.27
SPG11-210ENST00000558319 OR56B2PQ8NGI1 322 aa13.35□□□□□ -0.27
SPG11-210ENST00000558319 LMF1Q96S06 567 aa13.35□□□□□ -0.27
SPG11-210ENST00000558319 PRTFDC1Q9NRG1 225 aa13.35□□□□□ -0.27
SPG11-210ENST00000558319 TEX10Q9NXF1 929 aaPredicted RBP13.35□□□□□ -0.27
SPG11-210ENST00000558319 CLEC4EQ9ULY5 219 aa13.35□□□□□ -0.27
SPG11-210ENST00000558319 A0A1W2PQL4 384 aaPredicted RBP13.34□□□□□ -0.27
SPG11-210ENST00000558319 RTCAO00442 366 aaKnown RBP13.34□□□□□ -0.27
SPG11-210ENST00000558319 PDYNP01213 254 aa13.34□□□□□ -0.27
SPG11-210ENST00000558319 PRKAR1BP31321 381 aa13.34□□□□□ -0.27
SPG11-210ENST00000558319 PPA1Q15181 289 aa13.34□□□□□ -0.27
SPG11-210ENST00000558319 SPHARQ15513 63 aa13.34□□□□□ -0.27
SPG11-210ENST00000558319 NKPD1Q17RQ9 610 aa13.34□□□□□ -0.27
SPG11-210ENST00000558319 C22orf39Q6P5X5 142 aa13.34□□□□□ -0.27
SPG11-210ENST00000558319 OR10T2Q8NGX3 314 aa13.34□□□□□ -0.27
SPG11-210ENST00000558319 OR56A3Q8NH54 315 aa13.34□□□□□ -0.27
SPG11-210ENST00000558319 SLC35B2Q8TB61 432 aa13.34□□□□□ -0.27
SPG11-210ENST00000558319 PAQR8Q8TEZ7 354 aa13.34□□□□□ -0.27
SPG11-210ENST00000558319 PEX11GQ96HA9 241 aa13.34□□□□□ -0.27
SPG11-210ENST00000558319 C5AR2Q9P296 337 aa13.34□□□□□ -0.27
SPG11-210ENST00000558319 DLGAP4Q9Y2H0 992 aa13.34□□□□□ -0.27
SPG11-210ENST00000558319 MEIS3P1A6NDR6 274 aa13.34□□□□□ -0.27
SPG11-210ENST00000558319 COCHO43405 550 aa13.34□□□□□ -0.27
SPG11-210ENST00000558319 CD3GP09693 182 aa13.34□□□□□ -0.27
SPG11-210ENST00000558319 AGTR1P30556 359 aa13.34□□□□□ -0.27
SPG11-210ENST00000558319 VIPR2P41587 438 aa13.34□□□□□ -0.27
SPG11-210ENST00000558319 RELAQ04206 551 aa13.34□□□□□ -0.27
SPG11-210ENST00000558319 TRAM2Q15035 370 aa13.34□□□□□ -0.27
SPG11-210ENST00000558319 THRSPQ92748 146 aa13.34□□□□□ -0.27
SPG11-210ENST00000558319 DCBLD2Q96PD2 775 aa13.34□□□□□ -0.27
SPG11-210ENST00000558319 PLEKHA3Q9HB20 300 aa13.34□□□□□ -0.27
SPG11-210ENST00000558319 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.34□□□□□ -0.27
SPG11-210ENST00000558319 TSTD3H0UI37 97 aa13.34□□□□□ -0.27
SPG11-210ENST00000558319 K7ERQ8 282 aa13.34□□□□□ -0.27
SPG11-210ENST00000558319 SLC1A7O00341 560 aa13.34□□□□□ -0.27
SPG11-210ENST00000558319 AMY2AP04746 511 aa13.34□□□□□ -0.27
SPG11-210ENST00000558319 PYCR1P32322 319 aa13.34□□□□□ -0.27
SPG11-210ENST00000558319 TGM4P49221 684 aa13.34□□□□□ -0.27
SPG11-210ENST00000558319 PPP5CP53041 499 aa13.34□□□□□ -0.27
SPG11-210ENST00000558319 C15orf52Q6ZUT6 534 aaKnown RBP13.34□□□□□ -0.27
SPG11-210ENST00000558319 CHDHQ8NE62 594 aaPredicted RBP13.34□□□□□ -0.27
SPG11-210ENST00000558319 OR8K5Q8NH50 307 aa13.34□□□□□ -0.27
SPG11-210ENST00000558319 SAT2Q96F10 170 aaPredicted RBP13.34□□□□□ -0.27
SPG11-210ENST00000558319 ACTR6Q9GZN1 396 aa13.34□□□□□ -0.27
SPG11-210ENST00000558319 ACSL6Q9UKU0 697 aa13.34□□□□□ -0.27
SPG11-210ENST00000558319 PSAT1Q9Y617 370 aa13.34□□□□□ -0.27
SPG11-210ENST00000558319 MEIS3P2A8K0S8 358 aa13.34□□□□□ -0.27
SPG11-210ENST00000558319 H2BFMP0C1H6 154 aa13.34□□□□□ -0.27
SPG11-210ENST00000558319 PABPC4LP0CB38 370 aaKnown RBP13.34□□□□□ -0.27
SPG11-210ENST00000558319 CHRNB1P11230 501 aa13.34□□□□□ -0.27
SPG11-210ENST00000558319 S1PR1P21453 382 aa13.34□□□□□ -0.27
SPG11-210ENST00000558319 EPHA1P21709 976 aa13.34□□□□□ -0.27
SPG11-210ENST00000558319 FUT2Q10981 343 aa13.34□□□□□ -0.27
SPG11-210ENST00000558319 GID4Q8IVV7 300 aa13.34□□□□□ -0.27
SPG11-210ENST00000558319 FAM86B1Q8N7N1 296 aa13.34□□□□□ -0.27
SPG11-210ENST00000558319 TSPEARQ8WU66 669 aa13.34□□□□□ -0.27
SPG11-210ENST00000558319 SLC22A18Q96BI1 424 aa13.34□□□□□ -0.27
SPG11-210ENST00000558319 ZNF334Q9HCZ1 680 aaPredicted RBP13.34□□□□□ -0.27
SPG11-210ENST00000558319 AIPO00170 330 aa13.34□□□□□ -0.27
SPG11-210ENST00000558319 AGR2O95994 175 aa13.34□□□□□ -0.27
SPG11-210ENST00000558319 TNFRSF1BP20333 461 aa13.34□□□□□ -0.27
SPG11-210ENST00000558319 RNF4P78317 190 aa13.34□□□□□ -0.27
SPG11-210ENST00000558319 EMX2Q04743 252 aa13.34□□□□□ -0.27
SPG11-210ENST00000558319 SNTA1Q13424 505 aa13.34□□□□□ -0.27
SPG11-210ENST00000558319 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.34□□□□□ -0.274e-6■■□□□ 13.3
SPG11-210ENST00000558319 DEFB134Q4QY38 66 aa13.34□□□□□ -0.27
SPG11-210ENST00000558319 OR2T35Q8NGX2 323 aa13.34□□□□□ -0.27
SPG11-210ENST00000558319 FKBP10Q96AY3 582 aa13.34□□□□□ -0.27
SPG11-210ENST00000558319 FAM120CQ9NX05 1096 aaKnown RBP13.34□□□□□ -0.27
SPG11-210ENST00000558319 B4GALT6Q9UBX8 382 aa13.34□□□□□ -0.27
SPG11-210ENST00000558319 GPR52Q9Y2T5 361 aa13.34□□□□□ -0.27
SPG11-210ENST00000558319 TMEM11P17152 192 aa13.33□□□□□ -0.27
SPG11-210ENST00000558319 FBLP22087 321 aaKnown RBP13.33□□□□□ -0.27
SPG11-210ENST00000558319 FAM189A2Q15884 450 aa13.33□□□□□ -0.27
SPG11-210ENST00000558319 TMIGD1Q6UXZ0 262 aa13.33□□□□□ -0.27
SPG11-210ENST00000558319 FAM83HQ6ZRV2 1179 aaPredicted RBP13.33□□□□□ -0.27
SPG11-210ENST00000558319 NOXA1Q86UR1 476 aa13.33□□□□□ -0.27
SPG11-210ENST00000558319 HS3ST5Q8IZT8 346 aa13.33□□□□□ -0.27
SPG11-210ENST00000558319 TTLQ8NG68 377 aa13.33□□□□□ -0.27
SPG11-210ENST00000558319 HAPLN3Q96S86 360 aa13.33□□□□□ -0.27
SPG11-210ENST00000558319 TSPAN6O43657 245 aa13.33□□□□□ -0.28
SPG11-210ENST00000558319 JUNDP17535 347 aa13.33□□□□□ -0.28
SPG11-210ENST00000558319 AK4P27144 223 aaPredicted RBP13.33□□□□□ -0.28
SPG11-210ENST00000558319 PIK3CBP42338 1070 aa13.33□□□□□ -0.28
SPG11-210ENST00000558319 GPR4P46093 362 aa13.33□□□□□ -0.28
SPG11-210ENST00000558319 REEP3Q6NUK4 255 aa13.33□□□□□ -0.28
SPG11-210ENST00000558319 AGTRAPQ6RW13 159 aa13.33□□□□□ -0.28
SPG11-210ENST00000558319 OR14A2Q96R54 314 aa13.33□□□□□ -0.28
SPG11-210ENST00000558319 MACROD1Q9BQ69 325 aa13.33□□□□□ -0.28
SPG11-210ENST00000558319 KATNBL1Q9H079 304 aa13.33□□□□□ -0.28
SPG11-210ENST00000558319 UBE2J1Q9Y385 318 aaPredicted RBP13.33□□□□□ -0.28
SPG11-210ENST00000558319 FAM72CH0Y354 149 aa13.33□□□□□ -0.28
SPG11-210ENST00000558319 ERCC1P07992 297 aaPredicted RBP13.33□□□□□ -0.28
SPG11-210ENST00000558319 SNRNP70P08621 437 aaKnown RBP13.33□□□□□ -0.28
SPG11-210ENST00000558319 HNF1BP35680 557 aa13.33□□□□□ -0.28
SPG11-210ENST00000558319 POU3F4P49335 361 aa13.33□□□□□ -0.28
SPG11-210ENST00000558319 SLAMF1Q13291 335 aa13.33□□□□□ -0.28
SPG11-210ENST00000558319 ZNF630Q2M218 657 aaPredicted RBP13.33□□□□□ -0.28
SPG11-210ENST00000558319 FAM72AQ5TYM5 149 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms