RNA–Protein interactions for RNA: ENST00000558020.1

SNRPA1-204, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 3

Gene SNRPA1, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-204ENST00000558020 LGSNQ5TDP6 509 aa12.5□□□□□ -0.41
SNRPA1-204ENST00000558020 ADGRD1Q6QNK2 874 aa12.5□□□□□ -0.41
SNRPA1-204ENST00000558020 ARSKQ6UWY0 536 aa12.5□□□□□ -0.41
SNRPA1-204ENST00000558020 WDR53Q7Z5U6 358 aaPredicted RBP12.5□□□□□ -0.41
SNRPA1-204ENST00000558020 ULK2Q8IYT8 1036 aa12.5□□□□□ -0.41
SNRPA1-204ENST00000558020 DOK4Q8TEW6 326 aa12.5□□□□□ -0.41
SNRPA1-204ENST00000558020 CDK15Q96Q40 435 aa12.5□□□□□ -0.41
SNRPA1-204ENST00000558020 ANGPTL4Q9BY76 406 aa12.5□□□□□ -0.41
SNRPA1-204ENST00000558020 OR10A5Q9H207 317 aa12.5□□□□□ -0.41
SNRPA1-204ENST00000558020 SPRR3Q9UBC9 169 aa12.5□□□□□ -0.41
SNRPA1-204ENST00000558020 CNOT11Q9UKZ1 510 aaKnown RBP12.5□□□□□ -0.41
SNRPA1-204ENST00000558020 SNX6Q9UNH7 406 aa12.5□□□□□ -0.41
SNRPA1-204ENST00000558020 HIVEP1P15822 2718 aa12.5□□□□□ -0.41
SNRPA1-204ENST00000558020 C1orf226A1L170 272 aa12.49□□□□□ -0.41
SNRPA1-204ENST00000558020 SYT5O00445 386 aa12.49□□□□□ -0.41
SNRPA1-204ENST00000558020 TRIM3O75382 744 aaPredicted RBP12.49□□□□□ -0.41
SNRPA1-204ENST00000558020 EPPINO95925 133 aa12.49□□□□□ -0.41
SNRPA1-204ENST00000558020 IL2RAP01589 272 aa12.49□□□□□ -0.41
SNRPA1-204ENST00000558020 CPMP14384 443 aa12.49□□□□□ -0.41
SNRPA1-204ENST00000558020 CSNK2A2P19784 350 aaPredicted RBP12.49□□□□□ -0.41
SNRPA1-204ENST00000558020 NT5EP21589 574 aa12.49□□□□□ -0.41
SNRPA1-204ENST00000558020 ADH7P40394 386 aa12.49□□□□□ -0.41
SNRPA1-204ENST00000558020 KIR2DL3P43628 341 aa12.49□□□□□ -0.41
SNRPA1-204ENST00000558020 TRPC1P48995 793 aa12.49□□□□□ -0.41
SNRPA1-204ENST00000558020 DUSP8Q13202 625 aa12.49□□□□□ -0.41
SNRPA1-204ENST00000558020 TOMM20Q15388 145 aa12.49□□□□□ -0.41
SNRPA1-204ENST00000558020 TESK1Q15569 626 aa12.49□□□□□ -0.41
SNRPA1-204ENST00000558020 SGO1Q5FBB7 561 aa12.49□□□□□ -0.41
SNRPA1-204ENST00000558020 ZNF441Q8N8Z8 693 aa12.49□□□□□ -0.41
SNRPA1-204ENST00000558020 OR52B6Q8NGF0 335 aa12.49□□□□□ -0.41
SNRPA1-204ENST00000558020 SPPL2AQ8TCT8 520 aa12.49□□□□□ -0.41
SNRPA1-204ENST00000558020 SLC44A1Q8WWI5 657 aa12.49□□□□□ -0.41
SNRPA1-204ENST00000558020 RILPQ96NA2 401 aa12.49□□□□□ -0.41
SNRPA1-204ENST00000558020 MRPL57Q9BQC6 102 aaKnown RBP12.49□□□□□ -0.41
SNRPA1-204ENST00000558020 SLC6A15Q9H2J7 730 aa12.49□□□□□ -0.41
SNRPA1-204ENST00000558020 PROK2Q9HC23 129 aa12.49□□□□□ -0.41
SNRPA1-204ENST00000558020 NINJ2Q9NZG7 142 aa12.49□□□□□ -0.41
SNRPA1-204ENST00000558020 PCTPQ9UKL6 214 aa12.49□□□□□ -0.41
SNRPA1-204ENST00000558020 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.49□□□□□ -0.41
SNRPA1-204ENST00000558020 LRRC3CA6NJW4 275 aa12.48□□□□□ -0.41
SNRPA1-204ENST00000558020 URI1O94763 535 aaPredicted RBP12.48□□□□□ -0.41
SNRPA1-204ENST00000558020 ACSL3O95573 720 aa12.48□□□□□ -0.41
SNRPA1-204ENST00000558020 ENDOUP21128 410 aaKnown RBP12.48□□□□□ -0.41
SNRPA1-204ENST00000558020 FBXW4P57775 412 aa12.48□□□□□ -0.41
SNRPA1-204ENST00000558020 WHAMMP3Q1A5X7 153 aa12.48□□□□□ -0.41
SNRPA1-204ENST00000558020 GGTA1PQ4G0N0 100 aa12.48□□□□□ -0.41
SNRPA1-204ENST00000558020 TMEM64Q6YI46 380 aa12.48□□□□□ -0.41
SNRPA1-204ENST00000558020 NUP54Q7Z3B4 507 aa12.48□□□□□ -0.41
SNRPA1-204ENST00000558020 LACC1Q8IV20 430 aa12.48□□□□□ -0.41
SNRPA1-204ENST00000558020 LIX1LQ8IVB5 337 aa12.48□□□□□ -0.41
SNRPA1-204ENST00000558020 PLD6Q8N2A8 252 aaKnown RBP12.48□□□□□ -0.41
SNRPA1-204ENST00000558020 VWA5B2Q8N398 1253 aa12.48□□□□□ -0.41
SNRPA1-204ENST00000558020 METTL4Q8N3J2 472 aa12.48□□□□□ -0.41
SNRPA1-204ENST00000558020 ZNF615Q8N8J6 731 aa12.48□□□□□ -0.41
SNRPA1-204ENST00000558020 MNS1Q8NEH6 495 aa12.48□□□□□ -0.41
SNRPA1-204ENST00000558020 IFT81Q8WYA0 676 aa12.48□□□□□ -0.41
SNRPA1-204ENST00000558020 HSPBAP1Q96EW2 488 aa12.48□□□□□ -0.41
SNRPA1-204ENST00000558020 TIMP4Q99727 224 aa12.48□□□□□ -0.41
SNRPA1-204ENST00000558020 FAIM2Q9BWQ8 316 aa12.48□□□□□ -0.41
SNRPA1-204ENST00000558020 FUT8Q9BYC5 575 aa12.48□□□□□ -0.41
SNRPA1-204ENST00000558020 MRPL1Q9BYD6 325 aaKnown RBP12.48□□□□□ -0.41
SNRPA1-204ENST00000558020 MRPL46Q9H2W6 279 aaKnown RBP12.48□□□□□ -0.41
SNRPA1-204ENST00000558020 BRF2Q9HAW0 419 aa12.48□□□□□ -0.41
SNRPA1-204ENST00000558020 TEX10Q9NXF1 929 aaPredicted RBP12.48□□□□□ -0.41
SNRPA1-204ENST00000558020 DNAJB12Q9NXW2 375 aaKnown RBP12.48□□□□□ -0.41
SNRPA1-204ENST00000558020 ZNF629Q9UEG4 869 aaPredicted RBP12.48□□□□□ -0.41
SNRPA1-204ENST00000558020 BCAP29Q9UHQ4 241 aa12.48□□□□□ -0.41
SNRPA1-204ENST00000558020 FOXD3Q9UJU5 478 aaPredicted RBP12.48□□□□□ -0.41
SNRPA1-204ENST00000558020 SLC12A4Q9UP95 1085 aa12.48□□□□□ -0.41
SNRPA1-204ENST00000558020 ZNF780BQ9Y6R6 833 aa12.48□□□□□ -0.41
SNRPA1-204ENST00000558020 NINQ8N4C6 2090 aa12.48□□□□□ -0.41
SNRPA1-204ENST00000558020 POC1B-GALNT4F8VUJ3 575 aa12.47□□□□□ -0.41
SNRPA1-204ENST00000558020 CLPSP04118 112 aa12.47□□□□□ -0.41
SNRPA1-204ENST00000558020 HPNP05981 417 aa12.47□□□□□ -0.41
SNRPA1-204ENST00000558020 UQCRC1P31930 480 aa12.47□□□□□ -0.41
SNRPA1-204ENST00000558020 TIMP3P35625 211 aa12.47□□□□□ -0.41
SNRPA1-204ENST00000558020 CASP3P42574 277 aa12.47□□□□□ -0.41
SNRPA1-204ENST00000558020 CDK9P50750 372 aaKnown RBP12.47□□□□□ -0.41
SNRPA1-204ENST00000558020 DCAF7P61962 342 aa12.47□□□□□ -0.41
SNRPA1-204ENST00000558020 MAP4K2Q12851 820 aa12.47□□□□□ -0.41
SNRPA1-204ENST00000558020 SLC48A1Q6P1K1 146 aa12.47□□□□□ -0.41
SNRPA1-204ENST00000558020 COMMD6Q7Z4G1 85 aa12.47□□□□□ -0.41
SNRPA1-204ENST00000558020 C17orf53Q8N3J3 647 aaPredicted RBP12.47□□□□□ -0.41
SNRPA1-204ENST00000558020 OR4F6Q8NGB9 312 aa12.47□□□□□ -0.41
SNRPA1-204ENST00000558020 OR1J4Q8NGS1 313 aa12.47□□□□□ -0.41
SNRPA1-204ENST00000558020 SELENOMQ8WWX9 145 aa12.47□□□□□ -0.41
SNRPA1-204ENST00000558020 UCN3Q969E3 161 aa12.47□□□□□ -0.41
SNRPA1-204ENST00000558020 ISL2Q96A47 359 aa12.47□□□□□ -0.41
SNRPA1-204ENST00000558020 ADIPOR1Q96A54 375 aa12.47□□□□□ -0.41
SNRPA1-204ENST00000558020 DTNBP1Q96EV8 351 aa12.47□□□□□ -0.41
SNRPA1-204ENST00000558020 GNRHR2Q96P88 292 aa12.47□□□□□ -0.41
SNRPA1-204ENST00000558020 PAFAH2Q99487 392 aa12.47□□□□□ -0.41
SNRPA1-204ENST00000558020 FMO2Q99518 471 aa12.47□□□□□ -0.41
SNRPA1-204ENST00000558020 BRINP2Q9C0B6 783 aa12.47□□□□□ -0.41
SNRPA1-204ENST00000558020 METTL7AQ9H8H3 244 aa12.47□□□□□ -0.41
SNRPA1-204ENST00000558020 ZNF358Q9NW07 568 aa12.47□□□□□ -0.41
SNRPA1-204ENST00000558020 XPR1Q9UBH6 696 aa12.47□□□□□ -0.41
SNRPA1-204ENST00000558020 ZNF180Q9UJW8 692 aa12.47□□□□□ -0.41
SNRPA1-204ENST00000558020 L3MBTL1Q9Y468 752 aa12.47□□□□□ -0.41
SNRPA1-204ENST00000558020 PCDHA9Q9Y5H5 950 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms