RNA–Protein interactions for RNA: ENST00000557916.5

SMAD6-202, Transcript of SMAD family member 6, humanhuman

TSL 1 (best)

Gene SMAD6, Length 1,401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-202ENST00000557916 ABI3Q9P2A4 366 aa23.73■■□□□ 1.39
SMAD6-202ENST00000557916 ZNF639Q9UID6 485 aa23.73■■□□□ 1.39
SMAD6-202ENST00000557916 PCSK2P16519 638 aa23.72■■□□□ 1.39
SMAD6-202ENST00000557916 SOX18P35713 384 aa23.72■■□□□ 1.39
SMAD6-202ENST00000557916 CD97P48960 835 aa23.72■■□□□ 1.39
SMAD6-202ENST00000557916 TRMT12Q53H54 448 aaKnown RBP23.72■■□□□ 1.39
SMAD6-202ENST00000557916 KAT2AQ92830 837 aa23.72■■□□□ 1.39
SMAD6-202ENST00000557916 THOC1Q96FV9 657 aaKnown RBP23.72■■□□□ 1.39
SMAD6-202ENST00000557916 EBF4Q9BQW3 602 aa23.72■■□□□ 1.39
SMAD6-202ENST00000557916 LIN28AQ9H9Z2 209 aaKnown RBP23.72■■□□□ 1.39
SMAD6-202ENST00000557916 TCF7L2Q9NQB0 619 aa23.72■■□□□ 1.39
SMAD6-202ENST00000557916 ATAD3AQ9NVI7 634 aa23.72■■□□□ 1.39
SMAD6-202ENST00000557916 DYTNA2CJ06 578 aa23.71■■□□□ 1.39
SMAD6-202ENST00000557916 TMEM200CA6NKL6 621 aa23.71■■□□□ 1.39
SMAD6-202ENST00000557916 OR6C76A6NM76 312 aa23.71■■□□□ 1.39
SMAD6-202ENST00000557916 ANKRD28O15084 1053 aa23.71■■□□□ 1.39
SMAD6-202ENST00000557916 POLR3GO15318 223 aaPredicted RBP23.71■■□□□ 1.39
SMAD6-202ENST00000557916 WDPCPO95876 746 aa23.71■■□□□ 1.39
SMAD6-202ENST00000557916 LAMP1P11279 417 aa23.71■■□□□ 1.39
SMAD6-202ENST00000557916 ARG2P78540 354 aa23.71■■□□□ 1.39
SMAD6-202ENST00000557916 EXOSC7Q15024 291 aaKnown RBP23.71■■□□□ 1.39
SMAD6-202ENST00000557916 TMEM198Q66K66 360 aa23.71■■□□□ 1.39
SMAD6-202ENST00000557916 SLC29A4Q7RTT9 530 aa23.71■■□□□ 1.39
SMAD6-202ENST00000557916 PTRH1Q86Y79 214 aaKnown RBP23.71■■□□□ 1.39
SMAD6-202ENST00000557916 RBMXL3Q8N7X1 1067 aaKnown RBP23.71■■□□□ 1.39
SMAD6-202ENST00000557916 ZNF615Q8N8J6 731 aa23.71■■□□□ 1.39
SMAD6-202ENST00000557916 HAS2Q92819 552 aa23.71■■□□□ 1.39
SMAD6-202ENST00000557916 COQ8BQ96D53 544 aa23.71■■□□□ 1.39
SMAD6-202ENST00000557916 MYOTQ9UBF9 498 aa23.71■■□□□ 1.39
SMAD6-202ENST00000557916 BCAP29Q9UHQ4 241 aa23.71■■□□□ 1.39
SMAD6-202ENST00000557916 FCHO1O14526 889 aa23.7■■□□□ 1.38
SMAD6-202ENST00000557916 UBDO15205 165 aa23.7■■□□□ 1.38
SMAD6-202ENST00000557916 F10P00742 488 aa23.7■■□□□ 1.38
SMAD6-202ENST00000557916 VIMP08670 466 aaKnown RBP23.7■■□□□ 1.38
SMAD6-202ENST00000557916 FRKP42685 505 aaPredicted RBP23.7■■□□□ 1.38
SMAD6-202ENST00000557916 MANFP55145 182 aaKnown RBP23.7■■□□□ 1.38
SMAD6-202ENST00000557916 NFATC3Q12968 1075 aa23.7■■□□□ 1.38
SMAD6-202ENST00000557916 RPS6KA2Q15349 733 aa23.7■■□□□ 1.38
SMAD6-202ENST00000557916 C16orf47Q6ZP98 133 aaPredicted RBP23.7■■□□□ 1.38
SMAD6-202ENST00000557916 ZNF551Q7Z340 670 aaPredicted RBP23.7■■□□□ 1.38
SMAD6-202ENST00000557916 TEX19Q8NA77 164 aa23.7■■□□□ 1.38
SMAD6-202ENST00000557916 SIMC1Q8NDZ2 872 aa23.7■■□□□ 1.38
SMAD6-202ENST00000557916 ZFP28Q8NHY6 868 aa23.7■■□□□ 1.38
SMAD6-202ENST00000557916 NUBPLQ8TB37 319 aa23.7■■□□□ 1.38
SMAD6-202ENST00000557916 ERP27Q96DN0 273 aa23.7■■□□□ 1.38
SMAD6-202ENST00000557916 ZBED6CLQ96FA7 236 aaPredicted RBP23.7■■□□□ 1.38
SMAD6-202ENST00000557916 MARK4Q96L34 752 aa23.7■■□□□ 1.38
SMAD6-202ENST00000557916 MFRPQ9BY79 579 aa23.7■■□□□ 1.38
SMAD6-202ENST00000557916 RNF32Q9H0A6 362 aa23.7■■□□□ 1.38
SMAD6-202ENST00000557916 NPHS2Q9NP85 383 aa23.7■■□□□ 1.38
SMAD6-202ENST00000557916 ACSS1Q9NUB1 689 aaPredicted RBP23.7■■□□□ 1.38
SMAD6-202ENST00000557916 GPR45Q9Y5Y3 372 aa23.7■■□□□ 1.38
SMAD6-202ENST00000557916 WWP2O00308 870 aa23.69■■□□□ 1.38
SMAD6-202ENST00000557916 ITGA10O75578 1167 aa23.69■■□□□ 1.38
SMAD6-202ENST00000557916 SLITRK5O94991 958 aa23.69■■□□□ 1.38
SMAD6-202ENST00000557916 CBX7O95931 251 aa23.69■■□□□ 1.38
SMAD6-202ENST00000557916 IDO1P14902 403 aa23.69■■□□□ 1.38
SMAD6-202ENST00000557916 ST13P50502 369 aaKnown RBP23.69■■□□□ 1.38
SMAD6-202ENST00000557916 NME5P56597 212 aa23.69■■□□□ 1.38
SMAD6-202ENST00000557916 PGS1Q32NB8 556 aa23.69■■□□□ 1.38
SMAD6-202ENST00000557916 NATD1Q8N6N6 113 aa23.69■■□□□ 1.38
SMAD6-202ENST00000557916 GAL3ST4Q96RP7 486 aa23.69■■□□□ 1.38
SMAD6-202ENST00000557916 CCDC28BQ9BUN5 200 aa23.69■■□□□ 1.38
SMAD6-202ENST00000557916 FGFR1OP2Q9NVK5 253 aa23.69■■□□□ 1.38
SMAD6-202ENST00000557916 DCTN4Q9UJW0 460 aa23.69■■□□□ 1.38
SMAD6-202ENST00000557916 YARS2Q9Y2Z4 477 aaKnown RBP23.69■■□□□ 1.38
SMAD6-202ENST00000557916 CSAG2Q9Y5P2 127 aa23.69■■□□□ 1.38
SMAD6-202ENST00000557916 EIF4E1BA6NMX2 242 aaKnown RBP23.68■■□□□ 1.38
SMAD6-202ENST00000557916 PLOD3O60568 738 aa23.68■■□□□ 1.38
SMAD6-202ENST00000557916 BCAS2O75934 225 aaPredicted RBP23.68■■□□□ 1.38
SMAD6-202ENST00000557916 OR2J2O76002 312 aa23.68■■□□□ 1.38
SMAD6-202ENST00000557916 EFNA1P20827 205 aaPredicted RBP23.68■■□□□ 1.38
SMAD6-202ENST00000557916 CLNS1AP54105 237 aaKnown RBP23.68■■□□□ 1.38
SMAD6-202ENST00000557916 UFM1P61960 85 aa23.68■■□□□ 1.38
SMAD6-202ENST00000557916 KLRB1Q12918 225 aa23.68■■□□□ 1.38
SMAD6-202ENST00000557916 HSPB3Q12988 150 aa23.68■■□□□ 1.38
SMAD6-202ENST00000557916 DUSP8Q13202 625 aa23.68■■□□□ 1.38
SMAD6-202ENST00000557916 EBPQ15125 230 aaKnown RBP23.68■■□□□ 1.38
SMAD6-202ENST00000557916 GSTA3Q16772 222 aa23.68■■□□□ 1.38
SMAD6-202ENST00000557916 TMEM107Q6UX40 140 aa23.68■■□□□ 1.38
SMAD6-202ENST00000557916 OR7G2Q8NG99 324 aa23.68■■□□□ 1.38
SMAD6-202ENST00000557916 OR52R1Q8NGF1 315 aa23.68■■□□□ 1.38
SMAD6-202ENST00000557916 C16orf52Q8NHV5 167 aa23.68■■□□□ 1.38
SMAD6-202ENST00000557916 RFWD2Q8NHY2 731 aa23.68■■□□□ 1.38
SMAD6-202ENST00000557916 UTP23Q9BRU9 249 aaKnown RBP23.68■■□□□ 1.38
SMAD6-202ENST00000557916 SIKE1Q9BRV8 207 aa23.68■■□□□ 1.38
SMAD6-202ENST00000557916 DUSP26Q9BV47 211 aa23.68■■□□□ 1.38
SMAD6-202ENST00000557916 BHLHE41Q9C0J9 482 aaPredicted RBP23.68■■□□□ 1.38
SMAD6-202ENST00000557916 WWTR1Q9GZV5 400 aa23.68■■□□□ 1.38
SMAD6-202ENST00000557916 ANKRA2Q9H9E1 313 aa23.68■■□□□ 1.38
SMAD6-202ENST00000557916 CFL2Q9Y281 166 aa23.68■■□□□ 1.38
SMAD6-202ENST00000557916 KALRNO60229 2985 aa23.68■■□□□ 1.38
SMAD6-202ENST00000557916 C2orf92A0A1B0GVN3 265 aa23.67■■□□□ 1.38
SMAD6-202ENST00000557916 A0A1W2PRB8 838 aa23.67■■□□□ 1.38
SMAD6-202ENST00000557916 OR5H15A6NDH6 313 aa23.67■■□□□ 1.38
SMAD6-202ENST00000557916 E9PBE3 544 aa23.67■■□□□ 1.38
SMAD6-202ENST00000557916 PLOD2O00469 737 aa23.67■■□□□ 1.38
SMAD6-202ENST00000557916 PRAMEF2O60811 474 aa23.67■■□□□ 1.38
SMAD6-202ENST00000557916 PRB1P04280 392 aa23.67■■□□□ 1.38
SMAD6-202ENST00000557916 GPC1P35052 558 aa23.67■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms