RNA–Protein interactions for RNA: ENST00000557703.5

SHMT2-234, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 542 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-234ENST00000557703 UTP23Q9BRU9 249 aaKnown RBP12.72□□□□□ -0.37
SHMT2-234ENST00000557703 CNPPD1Q9BV87 410 aa12.72□□□□□ -0.37
SHMT2-234ENST00000557703 DPY30Q9C005 99 aa12.72□□□□□ -0.37
SHMT2-234ENST00000557703 OR10A5Q9H207 317 aa12.72□□□□□ -0.37
SHMT2-234ENST00000557703 NEUROD4Q9HD90 331 aa12.72□□□□□ -0.37
SHMT2-234ENST00000557703 TCF7L2Q9NQB0 619 aa12.72□□□□□ -0.37
SHMT2-234ENST00000557703 TAS2R9Q9NYW1 312 aa12.72□□□□□ -0.37
SHMT2-234ENST00000557703 MAT2BQ9NZL9 334 aa12.72□□□□□ -0.37
SHMT2-234ENST00000557703 SH3BP4Q9P0V3 963 aa12.72□□□□□ -0.37
SHMT2-234ENST00000557703 NTMQ9P121 344 aa12.72□□□□□ -0.37
SHMT2-234ENST00000557703 MARCOQ9UEW3 520 aaPredicted RBP12.72□□□□□ -0.37
SHMT2-234ENST00000557703 ERVK-19Q9WJR5 959 aa12.72□□□□□ -0.37
SHMT2-234ENST00000557703 OR5H15A6NDH6 313 aa12.71□□□□□ -0.37
SHMT2-234ENST00000557703 TCP11X1B4DZS4 312 aa12.71□□□□□ -0.37
SHMT2-234ENST00000557703 UBDO15205 165 aa12.71□□□□□ -0.37
SHMT2-234ENST00000557703 ACOX3O15254 700 aa12.71□□□□□ -0.37
SHMT2-234ENST00000557703 DIAPH2O60879 1101 aa12.71□□□□□ -0.37
SHMT2-234ENST00000557703 TROVE2P10155 538 aaKnown RBP eCLIP12.71□□□□□ -0.37
SHMT2-234ENST00000557703 NAGAP17050 411 aa12.71□□□□□ -0.37
SHMT2-234ENST00000557703 CYB561P49447 251 aa12.71□□□□□ -0.37
SHMT2-234ENST00000557703 HLCSP50747 726 aa12.71□□□□□ -0.37
SHMT2-234ENST00000557703 SSR4P51571 173 aa12.71□□□□□ -0.37
SHMT2-234ENST00000557703 NCBP2P52298 156 aaKnown RBP eCLIP12.71□□□□□ -0.37
SHMT2-234ENST00000557703 ARG2P78540 354 aa12.71□□□□□ -0.37
SHMT2-234ENST00000557703 MGAT2Q10469 447 aa12.71□□□□□ -0.37
SHMT2-234ENST00000557703 PTGR1Q14914 329 aa12.71□□□□□ -0.37
SHMT2-234ENST00000557703 PDCD4Q53EL6 469 aaKnown RBP12.71□□□□□ -0.37
SHMT2-234ENST00000557703 ZNF628Q5EBL2 1059 aa12.71□□□□□ -0.37
SHMT2-234ENST00000557703 PIGGQ5H8A4 983 aa12.71□□□□□ -0.37
SHMT2-234ENST00000557703 FAM219BQ5XKK7 198 aa12.71□□□□□ -0.37
SHMT2-234ENST00000557703 HLA-DQA1Q5Y7H0 255 aa12.71□□□□□ -0.37
SHMT2-234ENST00000557703 ZCCHC12Q6PEW1 402 aa12.71□□□□□ -0.37
SHMT2-234ENST00000557703 BHLHB9Q6PI77 547 aa12.71□□□□□ -0.37
SHMT2-234ENST00000557703 OPN5Q6U736 354 aa12.71□□□□□ -0.37
SHMT2-234ENST00000557703 TAGAPQ8N103 731 aa12.71□□□□□ -0.37
SHMT2-234ENST00000557703 ZNF615Q8N8J6 731 aa12.71□□□□□ -0.37
SHMT2-234ENST00000557703 SLC22A8Q8TCC7 542 aa12.71□□□□□ -0.37
SHMT2-234ENST00000557703 UCN3Q969E3 161 aa12.71□□□□□ -0.37
SHMT2-234ENST00000557703 MOAP1Q96BY2 351 aa12.71□□□□□ -0.37
SHMT2-234ENST00000557703 HSPBAP1Q96EW2 488 aa12.71□□□□□ -0.37
SHMT2-234ENST00000557703 SGCZQ96LD1 299 aa12.71□□□□□ -0.37
SHMT2-234ENST00000557703 C1orf50Q9BV19 199 aa12.71□□□□□ -0.37
SHMT2-234ENST00000557703 CDCP1Q9H5V8 836 aa12.71□□□□□ -0.37
SHMT2-234ENST00000557703 C3orf14Q9HBI5 128 aa12.71□□□□□ -0.37
SHMT2-234ENST00000557703 AIG1Q9NVV5 245 aa12.71□□□□□ -0.37
SHMT2-234ENST00000557703 ZIM2Q9NZV7 527 aa12.71□□□□□ -0.37
SHMT2-234ENST00000557703 ZNF223Q9UK11 482 aaPredicted RBP12.71□□□□□ -0.37
SHMT2-234ENST00000557703 C19orf53Q9UNZ5 99 aaPredicted RBP12.71□□□□□ -0.37
SHMT2-234ENST00000557703 TRIM33Q9UPN9 1127 aa12.71□□□□□ -0.37
SHMT2-234ENST00000557703 C2orf92A0A1B0GVN3 265 aa12.7□□□□□ -0.38
SHMT2-234ENST00000557703 RNASET2O00584 256 aaKnown RBP12.7□□□□□ -0.38
SHMT2-234ENST00000557703 ANKRD28O15084 1053 aa12.7□□□□□ -0.38
SHMT2-234ENST00000557703 ITGA10O75578 1167 aa12.7□□□□□ -0.38
SHMT2-234ENST00000557703 IL6P05231 212 aa12.7□□□□□ -0.38
SHMT2-234ENST00000557703 TMED10P49755 219 aaKnown RBP12.7□□□□□ -0.38
SHMT2-234ENST00000557703 TNFSF10P50591 281 aa12.7□□□□□ -0.38
SHMT2-234ENST00000557703 DIO3P55073 304 aa12.7□□□□□ -0.38
SHMT2-234ENST00000557703 NRG3P56975 720 aa12.7□□□□□ -0.38
SHMT2-234ENST00000557703 PRR5P85299 388 aa12.7□□□□□ -0.38
SHMT2-234ENST00000557703 EBPQ15125 230 aaKnown RBP12.7□□□□□ -0.38
SHMT2-234ENST00000557703 SOWAHCQ53LP3 525 aaPredicted RBP12.7□□□□□ -0.38
SHMT2-234ENST00000557703 NXNQ6DKJ4 435 aa12.7□□□□□ -0.38
SHMT2-234ENST00000557703 MMP21Q8N119 569 aa12.7□□□□□ -0.38
SHMT2-234ENST00000557703 OR2L13Q8N349 312 aa12.7□□□□□ -0.38
SHMT2-234ENST00000557703 TMEM156Q8N614 296 aa12.7□□□□□ -0.38
SHMT2-234ENST00000557703 OR5P2Q8WZ92 322 aa12.7□□□□□ -0.38
SHMT2-234ENST00000557703 TMEM125Q96AQ2 219 aa12.7□□□□□ -0.38
SHMT2-234ENST00000557703 ELP4Q96EB1 424 aa12.7□□□□□ -0.38
SHMT2-234ENST00000557703 PPP1R36Q96LQ0 422 aa12.7□□□□□ -0.38
SHMT2-234ENST00000557703 ZBTB18Q99592 522 aa12.7□□□□□ -0.38
SHMT2-234ENST00000557703 DUSP26Q9BV47 211 aa12.7□□□□□ -0.38
SHMT2-234ENST00000557703 WWTR1Q9GZV5 400 aa12.7□□□□□ -0.38
SHMT2-234ENST00000557703 GLIPR2Q9H4G4 154 aa12.7□□□□□ -0.38
SHMT2-234ENST00000557703 RABEP2Q9H5N1 569 aa12.7□□□□□ -0.38
SHMT2-234ENST00000557703 CLMPQ9H6B4 373 aa12.7□□□□□ -0.38
SHMT2-234ENST00000557703 WDR55Q9H6Y2 383 aaPredicted RBP12.7□□□□□ -0.38
SHMT2-234ENST00000557703 ZNF71Q9NQZ8 489 aaPredicted RBP12.7□□□□□ -0.38
SHMT2-234ENST00000557703 SDR39U1Q9NRG7 319 aaPredicted RBP12.7□□□□□ -0.38
SHMT2-234ENST00000557703 GPR45Q9Y5Y3 372 aa12.7□□□□□ -0.38
SHMT2-234ENST00000557703 CPAMD8Q8IZJ3 1885 aa12.7□□□□□ -0.38
SHMT2-234ENST00000557703 GOLGA8QA0A0J9YX86 632 aa12.69□□□□□ -0.38
SHMT2-234ENST00000557703 PRSS51A0A1B0GVH4 220 aa12.69□□□□□ -0.38
SHMT2-234ENST00000557703 A0A1W2PRB8 838 aa12.69□□□□□ -0.38
SHMT2-234ENST00000557703 GOLGA8OA6NCC3 632 aa12.69□□□□□ -0.38
SHMT2-234ENST00000557703 TMEM200CA6NKL6 621 aa12.69□□□□□ -0.38
SHMT2-234ENST00000557703 GOLGA8NF8WBI6 632 aa12.69□□□□□ -0.38
SHMT2-234ENST00000557703 MASP2O00187 686 aa12.69□□□□□ -0.38
SHMT2-234ENST00000557703 AKAP10O43572 662 aa12.69□□□□□ -0.38
SHMT2-234ENST00000557703 LRATO95237 230 aa12.69□□□□□ -0.38
SHMT2-234ENST00000557703 WDPCPO95876 746 aa12.69□□□□□ -0.38
SHMT2-234ENST00000557703 CELA2AP08217 269 aa12.69□□□□□ -0.38
SHMT2-234ENST00000557703 DRD5P21918 477 aa12.69□□□□□ -0.38
SHMT2-234ENST00000557703 KIR3DL1P43629 444 aa12.69□□□□□ -0.38
SHMT2-234ENST00000557703 PPICP45877 212 aa12.69□□□□□ -0.38
SHMT2-234ENST00000557703 IDH3AP50213 366 aa12.69□□□□□ -0.38
SHMT2-234ENST00000557703 ATP4BP51164 291 aa12.69□□□□□ -0.38
SHMT2-234ENST00000557703 AQP5P55064 265 aa12.69□□□□□ -0.38
SHMT2-234ENST00000557703 STX1BP61266 288 aa12.69□□□□□ -0.38
SHMT2-234ENST00000557703 RAPSNQ13702 412 aa12.69□□□□□ -0.38
SHMT2-234ENST00000557703 VPS26BQ4G0F5 336 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms