RNA–Protein interactions for RNA: ENST00000557529.1

SHMT2-233, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 1,369 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-233ENST00000557529 KAT2AQ92830 837 aa11.71□□□□□ -0.53
SHMT2-233ENST00000557529 ANKRD9Q96BM1 317 aaPredicted RBP11.71□□□□□ -0.53
SHMT2-233ENST00000557529 MMABQ96EY8 250 aaPredicted RBP11.71□□□□□ -0.53
SHMT2-233ENST00000557529 NUDT22Q9BRQ3 303 aa11.71□□□□□ -0.53
SHMT2-233ENST00000557529 SPATA5L1Q9BVQ7 753 aa11.71□□□□□ -0.53
SHMT2-233ENST00000557529 BCL2L10Q9HD36 194 aa11.71□□□□□ -0.53
SHMT2-233ENST00000557529 CALML5Q9NZT1 146 aa11.71□□□□□ -0.53
SHMT2-233ENST00000557529 TMEM9Q9P0T7 183 aa11.71□□□□□ -0.53
SHMT2-233ENST00000557529 HCN3Q9P1Z3 774 aa11.71□□□□□ -0.53
SHMT2-233ENST00000557529 SERTAD3Q9UJW9 196 aa11.71□□□□□ -0.53
SHMT2-233ENST00000557529 CDC14AQ9UNH5 594 aa11.71□□□□□ -0.53
SHMT2-233ENST00000557529 C19orf53Q9UNZ5 99 aaPredicted RBP11.71□□□□□ -0.53
SHMT2-233ENST00000557529 LIPT1Q9Y234 373 aa11.71□□□□□ -0.53
SHMT2-233ENST00000557529 PADI2Q9Y2J8 665 aa11.71□□□□□ -0.53
SHMT2-233ENST00000557529 CABIN1Q9Y6J0 2220 aa11.71□□□□□ -0.53
SHMT2-233ENST00000557529 C7orf72A4D263 438 aa11.7□□□□□ -0.54
SHMT2-233ENST00000557529 PATE3B3GLJ2 98 aa11.7□□□□□ -0.54
SHMT2-233ENST00000557529 G3V2T6 193 aa11.7□□□□□ -0.54
SHMT2-233ENST00000557529 EI24O14681 340 aa11.7□□□□□ -0.54
SHMT2-233ENST00000557529 PLOD3O60568 738 aa11.7□□□□□ -0.54
SHMT2-233ENST00000557529 CTNSO60931 367 aa11.7□□□□□ -0.54
SHMT2-233ENST00000557529 LDB3O75112 727 aa11.7□□□□□ -0.54
SHMT2-233ENST00000557529 MED26O95402 600 aa11.7□□□□□ -0.54
SHMT2-233ENST00000557529 HPRP00739 348 aa11.7□□□□□ -0.54
SHMT2-233ENST00000557529 OPN1SWP03999 348 aa11.7□□□□□ -0.54
SHMT2-233ENST00000557529 NT5EP21589 574 aa11.7□□□□□ -0.54
SHMT2-233ENST00000557529 PTGER1P34995 402 aa11.7□□□□□ -0.54
SHMT2-233ENST00000557529 MAN2A2P49641 1150 aa11.7□□□□□ -0.54
SHMT2-233ENST00000557529 ARHGDIAP52565 204 aa11.7□□□□□ -0.54
SHMT2-233ENST00000557529 ARSFP54793 590 aa11.7□□□□□ -0.54
SHMT2-233ENST00000557529 ITGA1P56199 1179 aa11.7□□□□□ -0.54
SHMT2-233ENST00000557529 VLDLRP98155 873 aa11.7□□□□□ -0.54
SHMT2-233ENST00000557529 ID2Q02363 134 aa11.7□□□□□ -0.54
SHMT2-233ENST00000557529 BIKQ13323 160 aa11.7□□□□□ -0.54
SHMT2-233ENST00000557529 DAG1Q14118 895 aa11.7□□□□□ -0.54
SHMT2-233ENST00000557529 PERM1Q5SV97 790 aa11.7□□□□□ -0.54
SHMT2-233ENST00000557529 ATAD3BQ5T9A4 648 aa11.7□□□□□ -0.54
SHMT2-233ENST00000557529 MFSD12Q6NUT3 480 aa11.7□□□□□ -0.54
SHMT2-233ENST00000557529 CDC73Q6P1J9 531 aa11.7□□□□□ -0.54
SHMT2-233ENST00000557529 SLC44A2Q8IWA5 706 aaPredicted RBP11.7□□□□□ -0.54
SHMT2-233ENST00000557529 C7orf57Q8NEG2 295 aa11.7□□□□□ -0.54
SHMT2-233ENST00000557529 OR4D9Q8NGE8 314 aa11.7□□□□□ -0.54
SHMT2-233ENST00000557529 OR5D16Q8NGK9 328 aa11.7□□□□□ -0.54
SHMT2-233ENST00000557529 SPPL2AQ8TCT8 520 aa11.7□□□□□ -0.54
SHMT2-233ENST00000557529 PEX11GQ96HA9 241 aa11.7□□□□□ -0.54
SHMT2-233ENST00000557529 OR7D2Q96RA2 312 aa11.7□□□□□ -0.54
SHMT2-233ENST00000557529 ZNF347Q96SE7 839 aa11.7□□□□□ -0.54
SHMT2-233ENST00000557529 NDC1Q9BTX1 674 aa11.7□□□□□ -0.54
SHMT2-233ENST00000557529 OSBPL10Q9BXB5 764 aa11.7□□□□□ -0.54
SHMT2-233ENST00000557529 PRTFDC1Q9NRG1 225 aa11.7□□□□□ -0.54
SHMT2-233ENST00000557529 THSD1Q9NS62 852 aa11.7□□□□□ -0.54
SHMT2-233ENST00000557529 EXD2Q9NVH0 621 aa11.7□□□□□ -0.54
SHMT2-233ENST00000557529 IFT80Q9P2H3 777 aaPredicted RBP11.7□□□□□ -0.54
SHMT2-233ENST00000557529 PDP2Q9P2J9 529 aa11.7□□□□□ -0.54
SHMT2-233ENST00000557529 GMEB2Q9UKD1 530 aa11.7□□□□□ -0.54
SHMT2-233ENST00000557529 AK5Q9Y6K8 562 aa11.7□□□□□ -0.54
SHMT2-233ENST00000557529 PI4KAP42356 2102 aa11.7□□□□□ -0.54
SHMT2-233ENST00000557529 NCOR1O75376 2440 aa11.7□□□□□ -0.54
SHMT2-233ENST00000557529 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.69□□□□□ -0.54
SHMT2-233ENST00000557529 A0A0G2JPF8 293 aa11.69□□□□□ -0.54
SHMT2-233ENST00000557529 A8MU76 341 aa11.69□□□□□ -0.54
SHMT2-233ENST00000557529 TMEM229AB2RXF0 380 aa11.69□□□□□ -0.54
SHMT2-233ENST00000557529 HNRNPCL2B2RXH8 293 aa11.69□□□□□ -0.54
SHMT2-233ENST00000557529 HNRNPCL3B7ZW38 293 aa11.69□□□□□ -0.54
SHMT2-233ENST00000557529 H3BMH7 237 aa11.69□□□□□ -0.54
SHMT2-233ENST00000557529 hCG_2039718K7EN88 272 aa11.69□□□□□ -0.54
SHMT2-233ENST00000557529 OR10H2O60403 315 aa11.69□□□□□ -0.54
SHMT2-233ENST00000557529 SOX30O94993 753 aa11.69□□□□□ -0.54
SHMT2-233ENST00000557529 MFN2O95140 757 aa11.69□□□□□ -0.54
SHMT2-233ENST00000557529 RPLP0P05388 317 aaKnown RBP11.69□□□□□ -0.54
SHMT2-233ENST00000557529 HNRNPCL4P0DMR1 293 aa11.69□□□□□ -0.54
SHMT2-233ENST00000557529 CKMT1AP12532 417 aa11.69□□□□□ -0.54
SHMT2-233ENST00000557529 ETS2P15036 469 aa11.69□□□□□ -0.54
SHMT2-233ENST00000557529 FOLR1P15328 257 aa11.69□□□□□ -0.54
SHMT2-233ENST00000557529 DCTP40126 519 aa11.69□□□□□ -0.54
SHMT2-233ENST00000557529 ALDH3A2P51648 485 aa11.69□□□□□ -0.54
SHMT2-233ENST00000557529 HSD17B7P56937 341 aa11.69□□□□□ -0.54
SHMT2-233ENST00000557529 CCL7P80098 99 aa11.69□□□□□ -0.54
SHMT2-233ENST00000557529 IGLV3-21P80748 117 aaPredicted RBP11.69□□□□□ -0.54
SHMT2-233ENST00000557529 MRPS35P82673 323 aaKnown RBP11.69□□□□□ -0.54
SHMT2-233ENST00000557529 DAB2P98082 770 aa11.69□□□□□ -0.54
SHMT2-233ENST00000557529 ACY1Q03154 408 aa11.69□□□□□ -0.54
SHMT2-233ENST00000557529 STX4Q12846 297 aa11.69□□□□□ -0.54
SHMT2-233ENST00000557529 SLC13A2Q13183 592 aa11.69□□□□□ -0.54
SHMT2-233ENST00000557529 MAPK11Q15759 364 aa11.69□□□□□ -0.54
SHMT2-233ENST00000557529 RPS26P11Q5JNZ5 115 aaPredicted RBP11.69□□□□□ -0.54
SHMT2-233ENST00000557529 FHL5Q5TD97 284 aa11.69□□□□□ -0.54
SHMT2-233ENST00000557529 ZCCHC12Q6PEW1 402 aa11.69□□□□□ -0.54
SHMT2-233ENST00000557529 MED25Q71SY5 747 aa11.69□□□□□ -0.54
SHMT2-233ENST00000557529 STK32CQ86UX6 486 aa11.69□□□□□ -0.54
SHMT2-233ENST00000557529 MARVELD2Q8N4S9 558 aa11.69□□□□□ -0.54
SHMT2-233ENST00000557529 OR51Q1Q8NH59 317 aa11.69□□□□□ -0.54
SHMT2-233ENST00000557529 OR1L3Q8NH93 324 aa11.69□□□□□ -0.54
SHMT2-233ENST00000557529 ADAMTS15Q8TE58 950 aa11.69□□□□□ -0.54
SHMT2-233ENST00000557529 PROX1Q92786 737 aa11.69□□□□□ -0.54
SHMT2-233ENST00000557529 GIMAP5Q96F15 307 aa11.69□□□□□ -0.54
SHMT2-233ENST00000557529 NRBF2Q96F24 287 aa11.69□□□□□ -0.54
SHMT2-233ENST00000557529 C16orf58Q96GQ5 468 aa11.69□□□□□ -0.54
SHMT2-233ENST00000557529 C7orf34Q96L11 122 aa11.69□□□□□ -0.54
SHMT2-233ENST00000557529 RDH12Q96NR8 316 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms