RNA–Protein interactions for RNA: ENST00000557431.5

SLIRP-210, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 725 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-210ENST00000557431 KBTBD12Q3ZCT8 623 aa12.86□□□□□ -0.35
SLIRP-210ENST00000557431 HLA-DQA1Q5Y7H0 255 aa12.86□□□□□ -0.35
SLIRP-210ENST00000557431 NSUN5P2Q63ZY6 315 aa12.86□□□□□ -0.35
SLIRP-210ENST00000557431 CYP20A1Q6UW02 462 aa12.86□□□□□ -0.35
SLIRP-210ENST00000557431 TAGAPQ8N103 731 aa12.86□□□□□ -0.35
SLIRP-210ENST00000557431 STAG3L4Q8TBR4 150 aa12.86□□□□□ -0.35
SLIRP-210ENST00000557431 UBTD2Q8WUN7 234 aa12.86□□□□□ -0.35
SLIRP-210ENST00000557431 SLC44A1Q8WWI5 657 aa12.86□□□□□ -0.35
SLIRP-210ENST00000557431 CDKL2Q92772 493 aa12.86□□□□□ -0.35
SLIRP-210ENST00000557431 HSPBAP1Q96EW2 488 aa12.86□□□□□ -0.35
SLIRP-210ENST00000557431 LRRC46Q96FV0 321 aa12.86□□□□□ -0.35
SLIRP-210ENST00000557431 CDK15Q96Q40 435 aa12.86□□□□□ -0.35
SLIRP-210ENST00000557431 YIPF4Q9BSR8 244 aa12.86□□□□□ -0.35
SLIRP-210ENST00000557431 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.86□□□□□ -0.35
SLIRP-210ENST00000557431 MS4A12Q9NXJ0 267 aa12.86□□□□□ -0.35
SLIRP-210ENST00000557431 ZNF629Q9UEG4 869 aaPredicted RBP12.86□□□□□ -0.35
SLIRP-210ENST00000557431 MAPRE3Q9UPY8 281 aa12.86□□□□□ -0.35
SLIRP-210ENST00000557431 RNF11Q9Y3C5 154 aa12.86□□□□□ -0.35
SLIRP-210ENST00000557431 ANGPTL3Q9Y5C1 460 aa12.86□□□□□ -0.35
SLIRP-210ENST00000557431 PCDHGB3Q9Y5G1 929 aa12.86□□□□□ -0.35
SLIRP-210ENST00000557431 MBD3L4A6NDZ8 208 aaPredicted RBP12.85□□□□□ -0.35
SLIRP-210ENST00000557431 MBD3L3A6NE82 208 aaPredicted RBP12.85□□□□□ -0.35
SLIRP-210ENST00000557431 MBD3L5A6NJ08 208 aaPredicted RBP12.85□□□□□ -0.35
SLIRP-210ENST00000557431 OR6C76A6NM76 312 aa12.85□□□□□ -0.35
SLIRP-210ENST00000557431 TP53I11O14683 189 aa12.85□□□□□ -0.35
SLIRP-210ENST00000557431 KERAO60938 352 aa12.85□□□□□ -0.35
SLIRP-210ENST00000557431 SIX3O95343 332 aaPredicted RBP12.85□□□□□ -0.35
SLIRP-210ENST00000557431 HRGP04196 525 aa12.85□□□□□ -0.35
SLIRP-210ENST00000557431 TMIGD3P0DMS9 266 aaPredicted RBP12.85□□□□□ -0.35
SLIRP-210ENST00000557431 NT5EP21589 574 aa12.85□□□□□ -0.35
SLIRP-210ENST00000557431 PTPN6P29350 595 aa12.85□□□□□ -0.35
SLIRP-210ENST00000557431 ADSLP30566 484 aaPredicted RBP12.85□□□□□ -0.35
SLIRP-210ENST00000557431 CASP3P42574 277 aa12.85□□□□□ -0.35
SLIRP-210ENST00000557431 FAM180BQ6P0A1 224 aa12.85□□□□□ -0.35
SLIRP-210ENST00000557431 FAM111BQ6SJ93 734 aa12.85□□□□□ -0.35
SLIRP-210ENST00000557431 ANGPTL8Q6UXH0 198 aa12.85□□□□□ -0.35
SLIRP-210ENST00000557431 DND1Q8IYX4 353 aaKnown RBP12.85□□□□□ -0.35
SLIRP-210ENST00000557431 CENPLQ8N0S6 344 aaPredicted RBP12.85□□□□□ -0.35
SLIRP-210ENST00000557431 GCNT2Q8N0V5 402 aa12.85□□□□□ -0.35
SLIRP-210ENST00000557431 ZNF615Q8N8J6 731 aa12.85□□□□□ -0.35
SLIRP-210ENST00000557431 FAM83FQ8NEG4 500 aaPredicted RBP12.85□□□□□ -0.35
SLIRP-210ENST00000557431 MBD3L2Q8NHZ7 208 aaPredicted RBP12.85□□□□□ -0.35
SLIRP-210ENST00000557431 ABTB1Q969K4 478 aaPredicted RBP12.85□□□□□ -0.35
SLIRP-210ENST00000557431 ADIPOR1Q96A54 375 aa12.85□□□□□ -0.35
SLIRP-210ENST00000557431 NODALQ96S42 347 aa12.85□□□□□ -0.35
SLIRP-210ENST00000557431 TUBA1CQ9BQE3 449 aa12.85□□□□□ -0.35
SLIRP-210ENST00000557431 ANGPTL4Q9BY76 406 aa12.85□□□□□ -0.35
SLIRP-210ENST00000557431 NXF5Q9H1B4 397 aaKnown RBP12.85□□□□□ -0.35
SLIRP-210ENST00000557431 OR10A5Q9H207 317 aa12.85□□□□□ -0.35
SLIRP-210ENST00000557431 ACTR8Q9H981 624 aa12.85□□□□□ -0.35
SLIRP-210ENST00000557431 CXorf21Q9HAI6 301 aa12.85□□□□□ -0.35
SLIRP-210ENST00000557431 GALNT9Q9HCQ5 603 aa12.85□□□□□ -0.35
SLIRP-210ENST00000557431 LYARQ9NX58 379 aaKnown RBP12.85□□□□□ -0.35
SLIRP-210ENST00000557431 GALNT8Q9NY28 637 aa12.85□□□□□ -0.35
SLIRP-210ENST00000557431 A0A1B0GTL3 188 aa12.84□□□□□ -0.35
SLIRP-210ENST00000557431 CD8B2A6NJW9 211 aa12.84□□□□□ -0.35
SLIRP-210ENST00000557431 NME6O75414 186 aaPredicted RBP12.84□□□□□ -0.35
SLIRP-210ENST00000557431 INHBBP09529 407 aa12.84□□□□□ -0.35
SLIRP-210ENST00000557431 LTA4HP09960 611 aaKnown RBP12.84□□□□□ -0.35
SLIRP-210ENST00000557431 FOSL1P15407 271 aa12.84□□□□□ -0.35
SLIRP-210ENST00000557431 CD53P19397 219 aa12.84□□□□□ -0.35
SLIRP-210ENST00000557431 GPX3P22352 226 aa12.84□□□□□ -0.35
SLIRP-210ENST00000557431 CTSSP25774 331 aa12.84□□□□□ -0.35
SLIRP-210ENST00000557431 CNTFP26441 200 aa12.84□□□□□ -0.35
SLIRP-210ENST00000557431 ABCD3P28288 659 aa12.84□□□□□ -0.35
SLIRP-210ENST00000557431 HOXC12P31275 282 aa12.84□□□□□ -0.35
SLIRP-210ENST00000557431 SPRP35270 261 aaPredicted RBP12.84□□□□□ -0.35
SLIRP-210ENST00000557431 PEX19P40855 299 aa12.84□□□□□ -0.35
SLIRP-210ENST00000557431 PTGDSP41222 190 aa12.84□□□□□ -0.35
SLIRP-210ENST00000557431 STARP49675 285 aa12.84□□□□□ -0.35
SLIRP-210ENST00000557431 DUSP2Q05923 314 aa12.84□□□□□ -0.35
SLIRP-210ENST00000557431 TBL3Q12788 808 aaKnown RBP12.84□□□□□ -0.35
SLIRP-210ENST00000557431 EXOSC7Q15024 291 aaKnown RBP12.84□□□□□ -0.35
SLIRP-210ENST00000557431 SETDB1Q15047 1291 aa12.84□□□□□ -0.35
SLIRP-210ENST00000557431 PCBP2Q15366 365 aaKnown RBP eCLIP12.84□□□□□ -0.35
SLIRP-210ENST00000557431 PFKFB4Q16877 469 aa12.84□□□□□ -0.35
SLIRP-210ENST00000557431 C3orf62Q6ZUJ4 267 aa12.84□□□□□ -0.35
SLIRP-210ENST00000557431 GOLGA7Q7Z5G4 137 aa12.84□□□□□ -0.35
SLIRP-210ENST00000557431 CAMKMTQ7Z624 323 aa12.84□□□□□ -0.35
SLIRP-210ENST00000557431 TBC1D1Q86TI0 1168 aaPredicted RBP12.84□□□□□ -0.35
SLIRP-210ENST00000557431 PACS2Q86VP3 889 aa12.84□□□□□ -0.35
SLIRP-210ENST00000557431 CCDC25Q86WR0 208 aa12.84□□□□□ -0.35
SLIRP-210ENST00000557431 GALNT12Q8IXK2 581 aa12.84□□□□□ -0.35
SLIRP-210ENST00000557431 PM20D2Q8IYS1 436 aa12.84□□□□□ -0.35
SLIRP-210ENST00000557431 CIARTQ8N365 385 aaPredicted RBP12.84□□□□□ -0.35
SLIRP-210ENST00000557431 C18orf12Q96KH6 178 aa12.84□□□□□ -0.35
SLIRP-210ENST00000557431 PELOQ9BRX2 385 aaKnown RBP12.84□□□□□ -0.35
SLIRP-210ENST00000557431 CENPKQ9BS16 269 aa12.84□□□□□ -0.35
SLIRP-210ENST00000557431 RBM24Q9BX46 236 aaKnown RBP12.84□□□□□ -0.35
SLIRP-210ENST00000557431 ITPAQ9BY32 194 aa12.84□□□□□ -0.35
SLIRP-210ENST00000557431 NMRAL1Q9HBL8 299 aa12.84□□□□□ -0.35
SLIRP-210ENST00000557431 SERHLQ9NQF3 203 aa12.84□□□□□ -0.35
SLIRP-210ENST00000557431 SNX15Q9NRS6 342 aa12.84□□□□□ -0.35
SLIRP-210ENST00000557431 CPSF2Q9P2I0 782 aaKnown RBP12.84□□□□□ -0.35
SLIRP-210ENST00000557431 FOXD3Q9UJU5 478 aaPredicted RBP12.84□□□□□ -0.35
SLIRP-210ENST00000557431 PYCARDQ9ULZ3 195 aa12.84□□□□□ -0.35
SLIRP-210ENST00000557431 ROS1P08922 2347 aa12.84□□□□□ -0.35
SLIRP-210ENST00000557431 DNHD1Q96M86 4753 aa12.83□□□□□ -0.36
SLIRP-210ENST00000557431 ANKRD33BA6NCL7 494 aa12.83□□□□□ -0.36
SLIRP-210ENST00000557431 C17orf51A8MQB3 221 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms