RNA–Protein interactions for RNA: ENST00000557275.5

SYNE3-205, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SYNE3, Length 13,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-205ENST00000557275 TRMT10BQ6PF06 316 aaKnown RBP8.48□□□□□ -1.05
SYNE3-205ENST00000557275 KCTD20Q7Z5Y7 419 aa8.48□□□□□ -1.05
SYNE3-205ENST00000557275 ZNF610Q8N9Z0 462 aa8.48□□□□□ -1.05
SYNE3-205ENST00000557275 CT45A3Q8NHU0 189 aa8.48□□□□□ -1.05
SYNE3-205ENST00000557275 B3GNT3Q9Y2A9 372 aa8.48□□□□□ -1.05
SYNE3-205ENST00000557275 K7EPK0 472 aa8.48□□□□□ -1.05
SYNE3-205ENST00000557275 B4GALT4O60513 344 aa8.48□□□□□ -1.05
SYNE3-205ENST00000557275 BCKDHBP21953 392 aa8.48□□□□□ -1.05
SYNE3-205ENST00000557275 L1CAMP32004 1257 aa8.48□□□□□ -1.05
SYNE3-205ENST00000557275 PLA2G4EQ3MJ16 856 aa8.48□□□□□ -1.05
SYNE3-205ENST00000557275 FAM71E2Q8N5Q1 922 aa8.48□□□□□ -1.05
SYNE3-205ENST00000557275 HERVK_113Q902F9 699 aa8.48□□□□□ -1.05
SYNE3-205ENST00000557275 TBX5Q99593 518 aa8.48□□□□□ -1.05
SYNE3-205ENST00000557275 FAM83CQ9BQN1 747 aa8.48□□□□□ -1.05
SYNE3-205ENST00000557275 DPCDQ9BVM2 203 aaPredicted RBP8.48□□□□□ -1.05
SYNE3-205ENST00000557275 GBA2Q9HCG7 927 aaPredicted RBP8.48□□□□□ -1.05
SYNE3-205ENST00000557275 ADAM29Q9UKF5 820 aa8.48□□□□□ -1.05
SYNE3-205ENST00000557275 A0A0A6YYH2 397 aa8.48□□□□□ -1.05
SYNE3-205ENST00000557275 A6NJ64 397 aa8.48□□□□□ -1.05
SYNE3-205ENST00000557275 BCHEP06276 602 aa8.48□□□□□ -1.05
SYNE3-205ENST00000557275 SF3A2Q15428 464 aaKnown RBP8.48□□□□□ -1.05
SYNE3-205ENST00000557275 FLYWCH1Q4VC44 716 aa8.48□□□□□ -1.05
SYNE3-205ENST00000557275 SERPINA9Q86WD7 417 aa8.48□□□□□ -1.05
SYNE3-205ENST00000557275 ELP4Q96EB1 424 aa8.48□□□□□ -1.05
SYNE3-205ENST00000557275 HOXD1Q9GZZ0 328 aa8.48□□□□□ -1.05
SYNE3-205ENST00000557275 OR6C74A6NCV1 312 aa8.48□□□□□ -1.05
SYNE3-205ENST00000557275 CHEK1O14757 476 aa8.48□□□□□ -1.05
SYNE3-205ENST00000557275 MTPNP58546 118 aa8.48□□□□□ -1.05
SYNE3-205ENST00000557275 PRAMEF14Q5SWL7 426 aa8.48□□□□□ -1.05
SYNE3-205ENST00000557275 SHFQ7M4L6 423 aa8.48□□□□□ -1.05
SYNE3-205ENST00000557275 PRSS48Q7RTY5 328 aa8.48□□□□□ -1.05
SYNE3-205ENST00000557275 BAGE3Q86Y29 109 aa8.48□□□□□ -1.05
SYNE3-205ENST00000557275 BAGE2Q86Y30 109 aa8.48□□□□□ -1.05
SYNE3-205ENST00000557275 FRS2Q8WU20 508 aa8.48□□□□□ -1.05
SYNE3-205ENST00000557275 ARSGQ96EG1 525 aa8.48□□□□□ -1.05
SYNE3-205ENST00000557275 SERTAD3Q9UJW9 196 aa8.48□□□□□ -1.05
SYNE3-205ENST00000557275 SLC6A14Q9UN76 642 aa8.48□□□□□ -1.05
SYNE3-205ENST00000557275 PSAT1Q9Y617 370 aa8.48□□□□□ -1.05
SYNE3-205ENST00000557275 A0A0G2JLW4 131 aa8.48□□□□□ -1.05
SYNE3-205ENST00000557275 CREG1O75629 220 aa8.48□□□□□ -1.05
SYNE3-205ENST00000557275 UQCRC2P22695 453 aa8.48□□□□□ -1.05
SYNE3-205ENST00000557275 AVPI1Q5T686 147 aa8.48□□□□□ -1.05
SYNE3-205ENST00000557275 LCLAT1Q6UWP7 414 aa8.48□□□□□ -1.05
SYNE3-205ENST00000557275 TIPARPQ7Z3E1 657 aaKnown RBP8.48□□□□□ -1.05
SYNE3-205ENST00000557275 LACC1Q8IV20 430 aa8.48□□□□□ -1.05
SYNE3-205ENST00000557275 SMPDL3BQ92485 455 aa8.48□□□□□ -1.05
SYNE3-205ENST00000557275 ADIPOR1Q96A54 375 aa8.48□□□□□ -1.05
SYNE3-205ENST00000557275 OR51I1Q9H343 314 aa8.48□□□□□ -1.05
SYNE3-205ENST00000557275 CEPT1Q9Y6K0 416 aa8.48□□□□□ -1.05
SYNE3-205ENST00000557275 ACACAQ13085 2346 aa8.48□□□□□ -1.05
SYNE3-205ENST00000557275 ZNF207O43670 478 aaKnown RBP8.48□□□□□ -1.05
SYNE3-205ENST00000557275 EIF4EP06730 217 aaKnown RBP8.48□□□□□ -1.05
SYNE3-205ENST00000557275 ENGP17813 658 aa8.48□□□□□ -1.05
SYNE3-205ENST00000557275 ARSFP54793 590 aa8.48□□□□□ -1.05
SYNE3-205ENST00000557275 HNRNPKP61978 463 aaKnown RBP eCLIP8.48□□□□□ -1.052e-8■■■■■ 27.6
SYNE3-205ENST00000557275 ERVK-25P63136 954 aa8.48□□□□□ -1.05
SYNE3-205ENST00000557275 KIAA0895LQ68EN5 471 aa8.48□□□□□ -1.05
SYNE3-205ENST00000557275 SULF2Q8IWU5 870 aa8.48□□□□□ -1.05
SYNE3-205ENST00000557275 SLC22A8Q8TCC7 542 aa8.48□□□□□ -1.05
SYNE3-205ENST00000557275 GOSR2O14653 212 aa8.48□□□□□ -1.05
SYNE3-205ENST00000557275 ARPC5O15511 151 aa8.48□□□□□ -1.05
SYNE3-205ENST00000557275 MT-ND1P03886 318 aa8.48□□□□□ -1.05
SYNE3-205ENST00000557275 BMP4P12644 408 aa8.48□□□□□ -1.05
SYNE3-205ENST00000557275 TAGLN2P37802 199 aaKnown RBP8.48□□□□□ -1.05
SYNE3-205ENST00000557275 SLAMF1Q13291 335 aa8.48□□□□□ -1.05
SYNE3-205ENST00000557275 TMEM225Q6GV28 225 aa8.48□□□□□ -1.05
SYNE3-205ENST00000557275 MED30Q96HR3 178 aa8.48□□□□□ -1.05
SYNE3-205ENST00000557275 AMDHD1Q96NU7 426 aa8.48□□□□□ -1.05
SYNE3-205ENST00000557275 DPYSL5Q9BPU6 564 aa8.48□□□□□ -1.05
SYNE3-205ENST00000557275 TOXO94900 526 aa8.47□□□□□ -1.05
SYNE3-205ENST00000557275 TK1P04183 234 aa8.47□□□□□ -1.05
SYNE3-205ENST00000557275 RETP07949 1114 aa8.47□□□□□ -1.05
SYNE3-205ENST00000557275 MMP12P39900 470 aa8.47□□□□□ -1.05
SYNE3-205ENST00000557275 PLA2G16P53816 162 aa8.47□□□□□ -1.05
SYNE3-205ENST00000557275 CYBRD1Q53TN4 286 aa8.47□□□□□ -1.05
SYNE3-205ENST00000557275 LIPKQ5VXJ0 399 aa8.47□□□□□ -1.05
SYNE3-205ENST00000557275 HEPHL1Q6MZM0 1159 aa8.47□□□□□ -1.05
SYNE3-205ENST00000557275 PRSS55Q6UWB4 352 aaPredicted RBP8.47□□□□□ -1.05
SYNE3-205ENST00000557275 TSPYL5Q86VY4 417 aaPredicted RBP8.47□□□□□ -1.05
SYNE3-205ENST00000557275 ZDHHC14Q8IZN3 488 aa8.47□□□□□ -1.05
SYNE3-205ENST00000557275 NAXEQ8NCW5 288 aa8.47□□□□□ -1.05
SYNE3-205ENST00000557275 TLCD1Q96CP7 247 aa8.47□□□□□ -1.05
SYNE3-205ENST00000557275 NELL2Q99435 816 aa8.47□□□□□ -1.05
SYNE3-205ENST00000557275 SLC22A7Q9Y694 548 aa8.47□□□□□ -1.05
SYNE3-205ENST00000557275 JRKO75564 520 aa8.47□□□□□ -1.05
SYNE3-205ENST00000557275 ADAP00813 363 aa8.47□□□□□ -1.05
SYNE3-205ENST00000557275 C1GALT1C1LP0DN25 315 aa8.47□□□□□ -1.05
SYNE3-205ENST00000557275 CHRNA4P43681 627 aa8.47□□□□□ -1.05
SYNE3-205ENST00000557275 SPTAN1Q13813 2472 aaKnown RBP8.47□□□□□ -1.05
SYNE3-205ENST00000557275 EGFP01133 1207 aa8.47□□□□□ -1.05
SYNE3-205ENST00000557275 AMY2AP04746 511 aa8.47□□□□□ -1.05
SYNE3-205ENST00000557275 AK4P27144 223 aaPredicted RBP8.47□□□□□ -1.05
SYNE3-205ENST00000557275 FKBP1BP68106 108 aa8.47□□□□□ -1.05
SYNE3-205ENST00000557275 IL13RA1P78552 427 aa8.47□□□□□ -1.05
SYNE3-205ENST00000557275 SEZ6Q53EL9 994 aa8.47□□□□□ -1.05
SYNE3-205ENST00000557275 PDE12Q6L8Q7 609 aaKnown RBP8.47□□□□□ -1.05
SYNE3-205ENST00000557275 OR2T4Q8NH00 348 aa8.47□□□□□ -1.05
SYNE3-205ENST00000557275 ARVCFO00192 962 aa8.47□□□□□ -1.05
SYNE3-205ENST00000557275 F2RL1P55085 397 aa8.47□□□□□ -1.05
SYNE3-205ENST00000557275 UBXN2BQ14CS0 331 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms