RNA–Protein interactions for RNA: ENST00000556422.5

TMEM260-210, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 3,864 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-210ENST00000556422 CD3GP09693 182 aa4.84□□□□□ -1.63
TMEM260-210ENST00000556422 SBK2P0C263 348 aa4.84□□□□□ -1.63
TMEM260-210ENST00000556422 SMIM18P0DKX4 95 aa4.84□□□□□ -1.63
TMEM260-210ENST00000556422 ATP1B2P14415 290 aaPredicted RBP4.84□□□□□ -1.63
TMEM260-210ENST00000556422 HRH2P25021 359 aa4.84□□□□□ -1.63
TMEM260-210ENST00000556422 TIE1P35590 1138 aa4.84□□□□□ -1.63
TMEM260-210ENST00000556422 UBE2G2P60604 165 aa4.84□□□□□ -1.63
TMEM260-210ENST00000556422 RPL38P63173 70 aaKnown RBP4.84□□□□□ -1.63
TMEM260-210ENST00000556422 FPGSQ05932 587 aa4.84□□□□□ -1.63
TMEM260-210ENST00000556422 MERTKQ12866 999 aa4.84□□□□□ -1.63
TMEM260-210ENST00000556422 SELENBP1Q13228 472 aa4.84□□□□□ -1.63
TMEM260-210ENST00000556422 ARHGEF7Q14155 803 aa4.84□□□□□ -1.63
TMEM260-210ENST00000556422 DUSP7Q16829 419 aa4.84□□□□□ -1.63
TMEM260-210ENST00000556422 GAB4Q2WGN9 574 aa4.84□□□□□ -1.63
TMEM260-210ENST00000556422 RFX4Q33E94 735 aa4.84□□□□□ -1.63
TMEM260-210ENST00000556422 NADK2Q4G0N4 442 aa4.84□□□□□ -1.63
TMEM260-210ENST00000556422 TMEM35AQ53FP2 167 aa4.84□□□□□ -1.63
TMEM260-210ENST00000556422 ARSIQ5FYB1 569 aa4.84□□□□□ -1.63
TMEM260-210ENST00000556422 TOR2AQ5JU69 321 aa4.84□□□□□ -1.63
TMEM260-210ENST00000556422 ZNF648Q5T619 568 aaPredicted RBP4.84□□□□□ -1.63
TMEM260-210ENST00000556422 HEPHL1Q6MZM0 1159 aa4.84□□□□□ -1.63
TMEM260-210ENST00000556422 KIAA1161Q6NSJ0 714 aa4.84□□□□□ -1.63
TMEM260-210ENST00000556422 BRAT1Q6PJG6 821 aa4.84□□□□□ -1.63
TMEM260-210ENST00000556422 C6orf15Q6UXA7 325 aaPredicted RBP4.84□□□□□ -1.63
TMEM260-210ENST00000556422 UBE2R2Q712K3 238 aaPredicted RBP4.84□□□□□ -1.63
TMEM260-210ENST00000556422 ARPINQ7Z6K5 226 aa4.84□□□□□ -1.63
TMEM260-210ENST00000556422 AMIGO1Q86WK6 493 aa4.84□□□□□ -1.63
TMEM260-210ENST00000556422 CATSPERDQ86XM0 798 aa4.84□□□□□ -1.63
TMEM260-210ENST00000556422 SPPL2CQ8IUH8 684 aa4.84□□□□□ -1.63
TMEM260-210ENST00000556422 TRAM1L1Q8N609 369 aa4.84□□□□□ -1.63
TMEM260-210ENST00000556422 WDSUB1Q8N9V3 476 aa4.84□□□□□ -1.63
TMEM260-210ENST00000556422 IL17RCQ8NAC3 791 aa4.84□□□□□ -1.63
TMEM260-210ENST00000556422 OR4D6Q8NGJ1 314 aa4.84□□□□□ -1.63
TMEM260-210ENST00000556422 DNAJA4Q8WW22 397 aaPredicted RBP4.84□□□□□ -1.63
TMEM260-210ENST00000556422 NANOS1Q8WY41 292 aaKnown RBP4.84□□□□□ -1.63
TMEM260-210ENST00000556422 SGTBQ96EQ0 304 aa4.84□□□□□ -1.63
TMEM260-210ENST00000556422 MRPL48Q96GC5 212 aaKnown RBP4.84□□□□□ -1.63
TMEM260-210ENST00000556422 C10orf90Q96M02 699 aa4.84□□□□□ -1.63
TMEM260-210ENST00000556422 EGFL8Q99944 293 aa4.84□□□□□ -1.63
TMEM260-210ENST00000556422 DPYSL5Q9BPU6 564 aa4.84□□□□□ -1.63
TMEM260-210ENST00000556422 P2RY13Q9BPV8 354 aa4.84□□□□□ -1.63
TMEM260-210ENST00000556422 TRAF4Q9BUZ4 470 aaPredicted RBP4.84□□□□□ -1.63
TMEM260-210ENST00000556422 SLC12A9Q9BXP2 914 aa4.84□□□□□ -1.63
TMEM260-210ENST00000556422 RPF2Q9H7B2 306 aaKnown RBP4.84□□□□□ -1.63
TMEM260-210ENST00000556422 COQ10BQ9H8M1 238 aa4.84□□□□□ -1.63
TMEM260-210ENST00000556422 ABCB10Q9NRK6 738 aa4.84□□□□□ -1.63
TMEM260-210ENST00000556422 TMEM45AQ9NWC5 275 aa4.84□□□□□ -1.63
TMEM260-210ENST00000556422 GLTPQ9NZD2 209 aa4.84□□□□□ -1.63
TMEM260-210ENST00000556422 CLCA3PQ9Y6N3 262 aa4.84□□□□□ -1.63
TMEM260-210ENST00000556422 ATG2BQ96BY7 2078 aa4.84□□□□□ -1.63
TMEM260-210ENST00000556422 CCDC182A6NF36 153 aa4.84□□□□□ -1.63
TMEM260-210ENST00000556422 AQP12BA6NM10 295 aa4.84□□□□□ -1.63
TMEM260-210ENST00000556422 J3QRK9 145 aa4.84□□□□□ -1.63
TMEM260-210ENST00000556422 STK16O75716 305 aa4.84□□□□□ -1.63
TMEM260-210ENST00000556422 GATBO75879 557 aaKnown RBP4.84□□□□□ -1.63
TMEM260-210ENST00000556422 EBLN1P0CF75 366 aa4.84□□□□□ -1.63
TMEM260-210ENST00000556422 ZNF30P17039 623 aa4.84□□□□□ -1.63
TMEM260-210ENST00000556422 ZNF8P17098 575 aaPredicted RBP4.84□□□□□ -1.63
TMEM260-210ENST00000556422 MSH3P20585 1137 aa4.84□□□□□ -1.63
TMEM260-210ENST00000556422 CRATP43155 626 aa4.84□□□□□ -1.63
TMEM260-210ENST00000556422 YAP1P46937 504 aaKnown RBP4.84□□□□□ -1.63
TMEM260-210ENST00000556422 TNFRSF17Q02223 184 aa4.84□□□□□ -1.63
TMEM260-210ENST00000556422 FADDQ13158 208 aa4.84□□□□□ -1.63
TMEM260-210ENST00000556422 SLAQ13239 276 aa4.84□□□□□ -1.63
TMEM260-210ENST00000556422 NRF1Q16656 503 aa4.84□□□□□ -1.63
TMEM260-210ENST00000556422 C6orf52Q5T4I8 152 aa4.84□□□□□ -1.63
TMEM260-210ENST00000556422 PRAMEF20Q5VT98 475 aa4.84□□□□□ -1.63
TMEM260-210ENST00000556422 ZNF385CQ66K41 422 aaPredicted RBP4.84□□□□□ -1.63
TMEM260-210ENST00000556422 FKBP9P1Q75LS8 142 aa4.84□□□□□ -1.63
TMEM260-210ENST00000556422 RD3Q7Z3Z2 195 aa4.84□□□□□ -1.63
TMEM260-210ENST00000556422 TECPR1Q7Z6L1 1165 aa4.84□□□□□ -1.63
TMEM260-210ENST00000556422 AMIGO2Q86SJ2 522 aa4.84□□□□□ -1.63
TMEM260-210ENST00000556422 SFTPA1Q8IWL2 248 aa4.84□□□□□ -1.63
TMEM260-210ENST00000556422 AQP12AQ8IXF9 295 aa4.84□□□□□ -1.63
TMEM260-210ENST00000556422 OFCC1Q8IZS5 231 aa4.84□□□□□ -1.63
TMEM260-210ENST00000556422 EID3Q8N140 333 aa4.84□□□□□ -1.63
TMEM260-210ENST00000556422 LILRA3Q8N6C8 439 aaPredicted RBP4.84□□□□□ -1.63
TMEM260-210ENST00000556422 SIMC1Q8NDZ2 872 aa4.84□□□□□ -1.63
TMEM260-210ENST00000556422 PUM2Q8TB72 1066 aaKnown RBP eCLIP4.84□□□□□ -1.63
TMEM260-210ENST00000556422 PYCR2Q96C36 320 aa4.84□□□□□ -1.63
TMEM260-210ENST00000556422 FBXL8Q96CD0 374 aa4.84□□□□□ -1.63
TMEM260-210ENST00000556422 MRPL37Q9BZE1 423 aaKnown RBP4.84□□□□□ -1.63
TMEM260-210ENST00000556422 BTBD1Q9H0C5 482 aa4.84□□□□□ -1.63
TMEM260-210ENST00000556422 OR51V1Q9H2C8 321 aa4.84□□□□□ -1.63
TMEM260-210ENST00000556422 IKZF5Q9H5V7 419 aa4.84□□□□□ -1.63
TMEM260-210ENST00000556422 AGPAT4Q9NRZ5 378 aa4.84□□□□□ -1.63
TMEM260-210ENST00000556422 FAM212BQ9NTI7 297 aaPredicted RBP4.84□□□□□ -1.63
TMEM260-210ENST00000556422 DUS2Q9NX74 493 aaKnown RBP4.84□□□□□ -1.63
TMEM260-210ENST00000556422 KLQ9UEF7 1012 aa4.84□□□□□ -1.63
TMEM260-210ENST00000556422 LEF1Q9UJU2 399 aaPredicted RBP4.84□□□□□ -1.63
TMEM260-210ENST00000556422 RAB26Q9ULW5 256 aa4.84□□□□□ -1.63
TMEM260-210ENST00000556422 CKAP5Q14008 2032 aa4.84□□□□□ -1.63
TMEM260-210ENST00000556422 NUMA1Q14980 2115 aa4.84□□□□□ -1.63
TMEM260-210ENST00000556422 PLXND1Q9Y4D7 1925 aa4.84□□□□□ -1.63
TMEM260-210ENST00000556422 TRPM6Q9BX84 2022 aa4.84□□□□□ -1.64
TMEM260-210ENST00000556422 A0A075B6Q4 140 aa4.84□□□□□ -1.64
TMEM260-210ENST00000556422 A0A1B0GTW7 788 aa4.84□□□□□ -1.64
TMEM260-210ENST00000556422 ANTXRLA6NF34 631 aa4.84□□□□□ -1.64
TMEM260-210ENST00000556422 EFCAB10A6NFE3 127 aa4.84□□□□□ -1.64
TMEM260-210ENST00000556422 UPK3BL1B0FP48 263 aa4.84□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms