RNA–Protein interactions for RNA: ENST00000556063.1

TDP1-214, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 1,076 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-214ENST00000556063 CAPN7Q9Y6W3 813 aa7.12□□□□□ -1.27
TDP1-214ENST00000556063 PKD1L2Q7Z442 2459 aa7.11□□□□□ -1.27
TDP1-214ENST00000556063 TRBV11-1A0A0K0K1C0 115 aa7.11□□□□□ -1.27
TDP1-214ENST00000556063 CCDC154A6NI56 674 aa7.11□□□□□ -1.27
TDP1-214ENST00000556063 TTC36A6NLP5 189 aa7.11□□□□□ -1.27
TDP1-214ENST00000556063 PLOD2O00469 737 aa7.11□□□□□ -1.27
TDP1-214ENST00000556063 NR5A2O00482 541 aa7.11□□□□□ -1.27
TDP1-214ENST00000556063 CDK2AP1O14519 115 aa7.11□□□□□ -1.27
TDP1-214ENST00000556063 NDUFAB1O14561 156 aa7.11□□□□□ -1.27
TDP1-214ENST00000556063 ANGPT2O15123 496 aa7.11□□□□□ -1.27
TDP1-214ENST00000556063 EMC8O43402 210 aa7.11□□□□□ -1.27
TDP1-214ENST00000556063 PLOD3O60568 738 aa7.11□□□□□ -1.27
TDP1-214ENST00000556063 PRAMEF2O60811 474 aa7.11□□□□□ -1.27
TDP1-214ENST00000556063 DCTN3O75935 186 aa7.11□□□□□ -1.27
TDP1-214ENST00000556063 SOX30O94993 753 aa7.11□□□□□ -1.27
TDP1-214ENST00000556063 DDAH2O95865 285 aa7.11□□□□□ -1.27
TDP1-214ENST00000556063 C6orf47O95873 294 aa7.11□□□□□ -1.27
TDP1-214ENST00000556063 KRT16P08779 473 aa7.11□□□□□ -1.27
TDP1-214ENST00000556063 CCL11P51671 97 aa7.11□□□□□ -1.27
TDP1-214ENST00000556063 GPR143P51810 404 aa7.11□□□□□ -1.27
TDP1-214ENST00000556063 DCAF7P61962 342 aa7.11□□□□□ -1.27
TDP1-214ENST00000556063 FUT7Q11130 342 aa7.11□□□□□ -1.27
TDP1-214ENST00000556063 RCAN2Q14206 197 aa7.11□□□□□ -1.27
TDP1-214ENST00000556063 MYBPC3Q14896 1274 aa7.11□□□□□ -1.27
TDP1-214ENST00000556063 ZNHIT3Q15649 155 aaPredicted RBP7.11□□□□□ -1.27
TDP1-214ENST00000556063 MAPKAPK3Q16644 382 aa7.11□□□□□ -1.27
TDP1-214ENST00000556063 ZNF385BQ569K4 471 aa7.11□□□□□ -1.27
TDP1-214ENST00000556063 ZNF628Q5EBL2 1059 aa7.11□□□□□ -1.27
TDP1-214ENST00000556063 CRB2Q5IJ48 1285 aa7.11□□□□□ -1.27
TDP1-214ENST00000556063 ABHD17BQ5VST6 288 aa7.11□□□□□ -1.27
TDP1-214ENST00000556063 AGAP7PQ5VUJ5 663 aa7.11□□□□□ -1.27
TDP1-214ENST00000556063 OR4F3Q6IEY1 312 aa7.11□□□□□ -1.27
TDP1-214ENST00000556063 FAM180BQ6P0A1 224 aa7.11□□□□□ -1.27
TDP1-214ENST00000556063 BLOC1S3Q6QNY0 202 aa7.11□□□□□ -1.27
TDP1-214ENST00000556063 FAM111BQ6SJ93 734 aa7.11□□□□□ -1.27
TDP1-214ENST00000556063 ZNF551Q7Z340 670 aaPredicted RBP7.11□□□□□ -1.27
TDP1-214ENST00000556063 SZRD1Q7Z422 152 aa7.11□□□□□ -1.27
TDP1-214ENST00000556063 PIGWQ7Z7B1 504 aa7.11□□□□□ -1.27
TDP1-214ENST00000556063 LGI4Q8N135 537 aa7.11□□□□□ -1.27
TDP1-214ENST00000556063 CCDC197Q8NCU1 140 aa7.11□□□□□ -1.27
TDP1-214ENST00000556063 NFAM1Q8NET5 270 aaPredicted RBP7.11□□□□□ -1.27
TDP1-214ENST00000556063 ADCY4Q8NFM4 1077 aa7.11□□□□□ -1.27
TDP1-214ENST00000556063 OR56A1Q8NGH5 318 aa7.11□□□□□ -1.27
TDP1-214ENST00000556063 SUN3Q8TAQ9 357 aa7.11□□□□□ -1.27
TDP1-214ENST00000556063 NUBPLQ8TB37 319 aa7.11□□□□□ -1.27
TDP1-214ENST00000556063 ELP5Q8TE02 316 aa7.11□□□□□ -1.27
TDP1-214ENST00000556063 ZNF721Q8TF20 911 aa7.11□□□□□ -1.27
TDP1-214ENST00000556063 TM9SF4Q92544 642 aa7.11□□□□□ -1.27
TDP1-214ENST00000556063 KAT2AQ92830 837 aa7.11□□□□□ -1.27
TDP1-214ENST00000556063 CTHRC1Q96CG8 243 aa7.11□□□□□ -1.27
TDP1-214ENST00000556063 SPDL1Q96EA4 605 aa7.11□□□□□ -1.27
TDP1-214ENST00000556063 ELP4Q96EB1 424 aa7.11□□□□□ -1.27
TDP1-214ENST00000556063 ITCHQ96J02 903 aa7.11□□□□□ -1.27
TDP1-214ENST00000556063 TEX37Q96LM6 180 aa7.11□□□□□ -1.27
TDP1-214ENST00000556063 ZNF354BQ96LW1 612 aa7.11□□□□□ -1.27
TDP1-214ENST00000556063 AGAP4Q96P64 663 aa7.11□□□□□ -1.27
TDP1-214ENST00000556063 PANX1Q96RD7 426 aa7.11□□□□□ -1.27
TDP1-214ENST00000556063 SLC25A23Q9BV35 468 aa7.11□□□□□ -1.27
TDP1-214ENST00000556063 SEMA4CQ9C0C4 833 aa7.11□□□□□ -1.27
TDP1-214ENST00000556063 PRORYQ9H606 182 aa7.11□□□□□ -1.27
TDP1-214ENST00000556063 SAR1AQ9NR31 198 aa7.11□□□□□ -1.27
TDP1-214ENST00000556063 GPR83Q9NYM4 423 aa7.11□□□□□ -1.27
TDP1-214ENST00000556063 TAS2R9Q9NYW1 312 aa7.11□□□□□ -1.27
TDP1-214ENST00000556063 BCAP29Q9UHQ4 241 aa7.11□□□□□ -1.27
TDP1-214ENST00000556063 BTNL2Q9UIR0 455 aa7.11□□□□□ -1.27
TDP1-214ENST00000556063 SNX8Q9Y5X2 465 aa7.11□□□□□ -1.27
TDP1-214ENST00000556063 C2orf92A0A1B0GVN3 265 aa7.1□□□□□ -1.27
TDP1-214ENST00000556063 A0A1W2PP18 115 aa7.1□□□□□ -1.27
TDP1-214ENST00000556063 A0A1W2PS29 197 aa7.1□□□□□ -1.27
TDP1-214ENST00000556063 A6NL46 340 aa7.1□□□□□ -1.27
TDP1-214ENST00000556063 A8MUI8 341 aa7.1□□□□□ -1.27
TDP1-214ENST00000556063 FCHO1O14526 889 aa7.1□□□□□ -1.27
TDP1-214ENST00000556063 RFXANKO14593 260 aa7.1□□□□□ -1.27
TDP1-214ENST00000556063 ANP32DO95626 131 aa7.1□□□□□ -1.27
TDP1-214ENST00000556063 CPSF4O95639 269 aaKnown RBP7.1□□□□□ -1.27
TDP1-214ENST00000556063 IGKV3-11P04433 115 aa7.1□□□□□ -1.27
TDP1-214ENST00000556063 ABCB1P08183 1280 aaPredicted RBP7.1□□□□□ -1.27
TDP1-214ENST00000556063 SNRPB2P08579 225 aaKnown RBP7.1□□□□□ -1.27
TDP1-214ENST00000556063 ITGAMP11215 1152 aa7.1□□□□□ -1.27
TDP1-214ENST00000556063 SFTPCP11686 197 aa7.1□□□□□ -1.27
TDP1-214ENST00000556063 EFNA1P20827 205 aaPredicted RBP7.1□□□□□ -1.27
TDP1-214ENST00000556063 IL12AP29459 219 aa7.1□□□□□ -1.27
TDP1-214ENST00000556063 SSTR4P31391 388 aa7.1□□□□□ -1.27
TDP1-214ENST00000556063 SOAT1P35610 550 aa7.1□□□□□ -1.27
TDP1-214ENST00000556063 CASRP41180 1078 aa7.1□□□□□ -1.27
TDP1-214ENST00000556063 MC3RP41968 323 aa7.1□□□□□ -1.27
TDP1-214ENST00000556063 TRPC1P48995 793 aa7.1□□□□□ -1.27
TDP1-214ENST00000556063 CCT3P49368 545 aaKnown RBP7.1□□□□□ -1.27
TDP1-214ENST00000556063 PRIM2P49643 509 aa7.1□□□□□ -1.27
TDP1-214ENST00000556063 ANXA11P50995 505 aaKnown RBP7.1□□□□□ -1.27
TDP1-214ENST00000556063 DGKQP52824 942 aa7.1□□□□□ -1.27
TDP1-214ENST00000556063 SLC37A1P57057 533 aa7.1□□□□□ -1.27
TDP1-214ENST00000556063 RNF4P78317 190 aa7.1□□□□□ -1.27
TDP1-214ENST00000556063 PSPHP78330 225 aa7.1□□□□□ -1.27
TDP1-214ENST00000556063 MRPS35P82673 323 aaKnown RBP7.1□□□□□ -1.27
TDP1-214ENST00000556063 DUSP2Q05923 314 aa7.1□□□□□ -1.27
TDP1-214ENST00000556063 CHAF1BQ13112 559 aa7.1□□□□□ -1.27
TDP1-214ENST00000556063 KLF10Q13118 480 aa7.1□□□□□ -1.27
TDP1-214ENST00000556063 STX5Q13190 355 aa7.1□□□□□ -1.27
TDP1-214ENST00000556063 TP53BP2Q13625 1128 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms