RNA–Protein interactions for RNA: ENST00000556005.1

EFCAB11-209, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 1 (best) BASIC

Gene EFCAB11, Length 1,856 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-209ENST00000556005 LIMS1P48059 325 aa9.49□□□□□ -0.89
EFCAB11-209ENST00000556005 VSX2P58304 361 aaPredicted RBP9.49□□□□□ -0.89
EFCAB11-209ENST00000556005 SIM1P81133 766 aaPredicted RBP9.49□□□□□ -0.89
EFCAB11-209ENST00000556005 CDK5R2Q13319 367 aa9.49□□□□□ -0.89
EFCAB11-209ENST00000556005 GANABQ14697 944 aaKnown RBP9.49□□□□□ -0.89
EFCAB11-209ENST00000556005 CTU2Q2VPK5 515 aaKnown RBP9.49□□□□□ -0.89
EFCAB11-209ENST00000556005 ZBED5Q49AG3 693 aa9.49□□□□□ -0.89
EFCAB11-209ENST00000556005 GPAT3Q53EU6 434 aa9.49□□□□□ -0.89
EFCAB11-209ENST00000556005 CHCHD2P9Q5T1J5 151 aaPredicted RBP9.49□□□□□ -0.89
EFCAB11-209ENST00000556005 ATAD3BQ5T9A4 648 aa9.49□□□□□ -0.89
EFCAB11-209ENST00000556005 SLC36A4Q6YBV0 504 aa9.49□□□□□ -0.89
EFCAB11-209ENST00000556005 KCTD8Q6ZWB6 473 aa9.49□□□□□ -0.89
EFCAB11-209ENST00000556005 SDR16C5Q8N3Y7 309 aa9.49□□□□□ -0.89
EFCAB11-209ENST00000556005 ARL14Q8N4G2 192 aa9.49□□□□□ -0.89
EFCAB11-209ENST00000556005 SLC5A8Q8N695 610 aa9.49□□□□□ -0.89
EFCAB11-209ENST00000556005 GPR32P1Q8NGA4 272 aa9.49□□□□□ -0.89
EFCAB11-209ENST00000556005 FBLIM1Q8WUP2 373 aa9.49□□□□□ -0.89
EFCAB11-209ENST00000556005 NCSTNQ92542 709 aa9.49□□□□□ -0.89
EFCAB11-209ENST00000556005 TMIGD2Q96BF3 282 aa9.49□□□□□ -0.89
EFCAB11-209ENST00000556005 OR7D2Q96RA2 312 aa9.49□□□□□ -0.89
EFCAB11-209ENST00000556005 PSD2Q9BQI7 771 aa9.49□□□□□ -0.89
EFCAB11-209ENST00000556005 NPLQ9BXD5 320 aaPredicted RBP9.49□□□□□ -0.89
EFCAB11-209ENST00000556005 GABARAPL3Q9BY60 117 aa9.49□□□□□ -0.89
EFCAB11-209ENST00000556005 ACTRT3Q9BYD9 372 aa9.49□□□□□ -0.89
EFCAB11-209ENST00000556005 PAPOLBQ9NRJ5 636 aaKnown RBP9.49□□□□□ -0.89
EFCAB11-209ENST00000556005 CALML5Q9NZT1 146 aa9.49□□□□□ -0.89
EFCAB11-209ENST00000556005 ENOPH1Q9UHY7 261 aa9.49□□□□□ -0.89
EFCAB11-209ENST00000556005 KCND3Q9UK17 655 aa9.49□□□□□ -0.89
EFCAB11-209ENST00000556005 LIPT1Q9Y234 373 aa9.49□□□□□ -0.89
EFCAB11-209ENST00000556005 POFUT2Q9Y2G5 429 aa9.49□□□□□ -0.89
EFCAB11-209ENST00000556005 ARRDC5A6NEK1 342 aa9.49□□□□□ -0.89
EFCAB11-209ENST00000556005 B4GAT1O43505 415 aa9.49□□□□□ -0.89
EFCAB11-209ENST00000556005 GALR3O60755 368 aaPredicted RBP9.49□□□□□ -0.89
EFCAB11-209ENST00000556005 CCNB2O95067 398 aa9.49□□□□□ -0.89
EFCAB11-209ENST00000556005 SLC34A2O95436 690 aa9.49□□□□□ -0.89
EFCAB11-209ENST00000556005 RECKO95980 971 aa9.49□□□□□ -0.89
EFCAB11-209ENST00000556005 AGR2O95994 175 aa9.49□□□□□ -0.89
EFCAB11-209ENST00000556005 PORP16435 677 aaPredicted RBP9.49□□□□□ -0.89
EFCAB11-209ENST00000556005 PTGER1P34995 402 aa9.49□□□□□ -0.89
EFCAB11-209ENST00000556005 PEX19P40855 299 aa9.49□□□□□ -0.89
EFCAB11-209ENST00000556005 MAZP56270 477 aaKnown RBP9.49□□□□□ -0.89
EFCAB11-209ENST00000556005 CXCR4P61073 352 aa9.49□□□□□ -0.89
EFCAB11-209ENST00000556005 HNRNPKP61978 463 aaKnown RBP eCLIP9.49□□□□□ -0.89
EFCAB11-209ENST00000556005 PPP1CAP62136 330 aa9.49□□□□□ -0.89
EFCAB11-209ENST00000556005 SNRPNP63162 240 aaKnown RBP9.49□□□□□ -0.89
EFCAB11-209ENST00000556005 RPP38P78345 283 aaKnown RBP9.49□□□□□ -0.89
EFCAB11-209ENST00000556005 ALDH16A1Q8IZ83 802 aa9.49□□□□□ -0.89
EFCAB11-209ENST00000556005 TAGAPQ8N103 731 aa9.49□□□□□ -0.89
EFCAB11-209ENST00000556005 C19orf47Q8N9M1 422 aaKnown RBP9.49□□□□□ -0.89
EFCAB11-209ENST00000556005 ADAMTS15Q8TE58 950 aa9.49□□□□□ -0.89
EFCAB11-209ENST00000556005 KAT2AQ92830 837 aa9.49□□□□□ -0.89
EFCAB11-209ENST00000556005 TANKQ92844 425 aa9.49□□□□□ -0.89
EFCAB11-209ENST00000556005 ZNF566Q969W8 418 aa9.49□□□□□ -0.89
EFCAB11-209ENST00000556005 NMD3Q96D46 503 aaKnown RBP9.49□□□□□ -0.89
EFCAB11-209ENST00000556005 C16orf58Q96GQ5 468 aa9.49□□□□□ -0.89
EFCAB11-209ENST00000556005 HRASLS5Q96KN8 279 aa9.49□□□□□ -0.89
EFCAB11-209ENST00000556005 HSPA12BQ96MM6 686 aa9.49□□□□□ -0.89
EFCAB11-209ENST00000556005 ALPK1Q96QP1 1244 aa9.49□□□□□ -0.89
EFCAB11-209ENST00000556005 CSF3RQ99062 836 aa9.49□□□□□ -0.89
EFCAB11-209ENST00000556005 SLC38A3Q99624 504 aa9.49□□□□□ -0.89
EFCAB11-209ENST00000556005 TUBA1CQ9BQE3 449 aa9.49□□□□□ -0.89
EFCAB11-209ENST00000556005 POLR1BQ9H9Y6 1135 aa9.49□□□□□ -0.89
EFCAB11-209ENST00000556005 NTMQ9P121 344 aa9.49□□□□□ -0.89
EFCAB11-209ENST00000556005 PTGFRNQ9P2B2 879 aa9.49□□□□□ -0.89
EFCAB11-209ENST00000556005 RSL24D1Q9UHA3 163 aaKnown RBP9.49□□□□□ -0.89
EFCAB11-209ENST00000556005 SLC9A8Q9Y2E8 581 aa9.49□□□□□ -0.89
EFCAB11-209ENST00000556005 NAALAD2Q9Y3Q0 740 aa9.49□□□□□ -0.89
EFCAB11-209ENST00000556005 TRIOBPQ9H2D6 2365 aa9.48□□□□□ -0.89
EFCAB11-209ENST00000556005 GIMAP1-GIMAP5A0A087WTJ2 511 aa9.48□□□□□ -0.89
EFCAB11-209ENST00000556005 ZNF860A6NHJ4 632 aa9.48□□□□□ -0.89
EFCAB11-209ENST00000556005 SLC1A7O00341 560 aa9.48□□□□□ -0.89
EFCAB11-209ENST00000556005 PCDH17O14917 1159 aa9.48□□□□□ -0.89
EFCAB11-209ENST00000556005 CASC3O15234 703 aaKnown RBP9.48□□□□□ -0.89
EFCAB11-209ENST00000556005 AQP9O43315 295 aa9.48□□□□□ -0.89
EFCAB11-209ENST00000556005 SRPX2O60687 465 aaPredicted RBP9.48□□□□□ -0.89
EFCAB11-209ENST00000556005 DNAJB6O75190 326 aa9.48□□□□□ -0.89
EFCAB11-209ENST00000556005 SLITRK5O94991 958 aa9.48□□□□□ -0.89
EFCAB11-209ENST00000556005 ANGPTL1O95841 491 aa9.48□□□□□ -0.89
EFCAB11-209ENST00000556005 CPMP14384 443 aa9.48□□□□□ -0.89
EFCAB11-209ENST00000556005 ST6GAL1P15907 406 aa9.48□□□□□ -0.89
EFCAB11-209ENST00000556005 AGXTP21549 392 aa9.48□□□□□ -0.89
EFCAB11-209ENST00000556005 CAPZBP47756 277 aa9.48□□□□□ -0.89
EFCAB11-209ENST00000556005 MAN2A2P49641 1150 aa9.48□□□□□ -0.89
EFCAB11-209ENST00000556005 NUP107P57740 925 aa9.48□□□□□ -0.89
EFCAB11-209ENST00000556005 SMIM11AP58511 58 aa9.48□□□□□ -0.89
EFCAB11-209ENST00000556005 OLR1P78380 273 aa9.48□□□□□ -0.89
EFCAB11-209ENST00000556005 LTB4RQ15722 352 aa9.48□□□□□ -0.89
EFCAB11-209ENST00000556005 TCTN3Q6NUS6 607 aa9.48□□□□□ -0.89
EFCAB11-209ENST00000556005 B3GNT6Q6ZMB0 384 aa9.48□□□□□ -0.89
EFCAB11-209ENST00000556005 OR4N5Q8IXE1 308 aa9.48□□□□□ -0.89
EFCAB11-209ENST00000556005 OR2L13Q8N349 312 aa9.48□□□□□ -0.89
EFCAB11-209ENST00000556005 BPIFB6Q8NFQ5 453 aa9.48□□□□□ -0.89
EFCAB11-209ENST00000556005 CNIH3Q8TBE1 160 aa9.48□□□□□ -0.89
EFCAB11-209ENST00000556005 CLDN23Q96B33 292 aa9.48□□□□□ -0.89
EFCAB11-209ENST00000556005 GIMAP5Q96F15 307 aa9.48□□□□□ -0.89
EFCAB11-209ENST00000556005 TCTN2Q96GX1 697 aa9.48□□□□□ -0.89
EFCAB11-209ENST00000556005 MS4A4EQ96PG1 132 aa9.48□□□□□ -0.89
EFCAB11-209ENST00000556005 TRNT1Q96Q11 434 aaKnown RBP9.48□□□□□ -0.89
EFCAB11-209ENST00000556005 PITX2Q99697 317 aa9.48□□□□□ -0.89
EFCAB11-209ENST00000556005 TBC1D17Q9HA65 648 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms