RNA–Protein interactions for RNA: ENST00000555178.5

TDP1-211, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 2,200 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-211ENST00000555178 TP53BP2Q13625 1128 aa10.06□□□□□ -0.8
TDP1-211ENST00000555178 PUM1Q14671 1186 aaKnown RBP eCLIP10.06□□□□□ -0.8
TDP1-211ENST00000555178 KPNB1Q14974 876 aaKnown RBP10.06□□□□□ -0.8
TDP1-211ENST00000555178 SPDYE7PQ495Y7 208 aa10.06□□□□□ -0.8
TDP1-211ENST00000555178 TRMT12Q53H54 448 aaKnown RBP10.06□□□□□ -0.8
TDP1-211ENST00000555178 NIPAL1Q6NVV3 410 aa10.06□□□□□ -0.8
TDP1-211ENST00000555178 VASH2Q86V25 355 aa10.06□□□□□ -0.8
TDP1-211ENST00000555178 RNF130Q86XS8 419 aa10.06□□□□□ -0.8
TDP1-211ENST00000555178 HIPK4Q8NE63 616 aa10.06□□□□□ -0.8
TDP1-211ENST00000555178 NKD1Q969G9 470 aa10.06□□□□□ -0.8
TDP1-211ENST00000555178 MAL2Q969L2 176 aa10.06□□□□□ -0.8
TDP1-211ENST00000555178 ZNF583Q96ND8 569 aa10.06□□□□□ -0.8
TDP1-211ENST00000555178 DENND2DQ9H6A0 471 aaPredicted RBP10.06□□□□□ -0.8
TDP1-211ENST00000555178 EPS8L2Q9H6S3 715 aa10.06□□□□□ -0.8
TDP1-211ENST00000555178 NEUROD4Q9HD90 331 aa10.06□□□□□ -0.8
TDP1-211ENST00000555178 MKKSQ9NPJ1 570 aaPredicted RBP10.06□□□□□ -0.8
TDP1-211ENST00000555178 PSME2Q9UL46 239 aa10.06□□□□□ -0.8
TDP1-211ENST00000555178 PADI1Q9ULC6 663 aa10.06□□□□□ -0.8
TDP1-211ENST00000555178 POMPQ9Y244 141 aa10.06□□□□□ -0.8
TDP1-211ENST00000555178 AK5Q9Y6K8 562 aa10.06□□□□□ -0.8
TDP1-211ENST00000555178 ACACAQ13085 2346 aa10.06□□□□□ -0.8
TDP1-211ENST00000555178 IDSB3KWA1 339 aa10.06□□□□□ -0.8
TDP1-211ENST00000555178 RAD1O60671 282 aa10.06□□□□□ -0.8
TDP1-211ENST00000555178 ALOX12BO75342 701 aa10.06□□□□□ -0.8
TDP1-211ENST00000555178 KLK3P07288 261 aaPredicted RBP10.06□□□□□ -0.8
TDP1-211ENST00000555178 HBQ1P09105 142 aa10.06□□□□□ -0.8
TDP1-211ENST00000555178 ZCCHC18P0CG32 403 aa10.06□□□□□ -0.8
TDP1-211ENST00000555178 ETFAP13804 333 aa10.06□□□□□ -0.8
TDP1-211ENST00000555178 NT5EP21589 574 aa10.06□□□□□ -0.8
TDP1-211ENST00000555178 ID4P47928 161 aa10.06□□□□□ -0.8
TDP1-211ENST00000555178 GZMMP51124 257 aa10.06□□□□□ -0.8
TDP1-211ENST00000555178 STX4Q12846 297 aa10.06□□□□□ -0.8
TDP1-211ENST00000555178 RTP5Q14D33 572 aa10.06□□□□□ -0.8
TDP1-211ENST00000555178 MLC1Q15049 377 aa10.06□□□□□ -0.8
TDP1-211ENST00000555178 NCF4Q15080 339 aa10.06□□□□□ -0.8
TDP1-211ENST00000555178 ZNF628Q5EBL2 1059 aa10.06□□□□□ -0.8
TDP1-211ENST00000555178 SAMD4BQ5PRF9 694 aaKnown RBP10.06□□□□□ -0.8
TDP1-211ENST00000555178 ZNF595Q8IYB9 648 aa10.06□□□□□ -0.8
TDP1-211ENST00000555178 PSMA8Q8TAA3 256 aa10.06□□□□□ -0.8
TDP1-211ENST00000555178 ELP4Q96EB1 424 aa10.06□□□□□ -0.8
TDP1-211ENST00000555178 NAF1Q96HR8 494 aaKnown RBP10.06□□□□□ -0.8
TDP1-211ENST00000555178 RAB3IPQ96QF0 476 aaPredicted RBP10.06□□□□□ -0.8
TDP1-211ENST00000555178 YIPF4Q9BSR8 244 aa10.06□□□□□ -0.8
TDP1-211ENST00000555178 TGIF2Q9GZN2 237 aa10.06□□□□□ -0.8
TDP1-211ENST00000555178 EQTNQ9NQ60 294 aa10.06□□□□□ -0.8
TDP1-211ENST00000555178 ZCCHC3Q9NUD5 404 aaKnown RBP10.06□□□□□ -0.8
TDP1-211ENST00000555178 MRPS33Q9Y291 106 aaKnown RBP10.06□□□□□ -0.8
TDP1-211ENST00000555178 UPK1AO00322 258 aa10.05□□□□□ -0.8
TDP1-211ENST00000555178 ENTPD5O75356 428 aa10.05□□□□□ -0.8
TDP1-211ENST00000555178 UQCRC2P22695 453 aa10.05□□□□□ -0.8
TDP1-211ENST00000555178 ME2P23368 584 aa10.05□□□□□ -0.8
TDP1-211ENST00000555178 CCT3P49368 545 aaKnown RBP10.05□□□□□ -0.8
TDP1-211ENST00000555178 IGLV3-21P80748 117 aaPredicted RBP10.05□□□□□ -0.8
TDP1-211ENST00000555178 MAP7Q14244 749 aa10.05□□□□□ -0.8
TDP1-211ENST00000555178 EXOSC7Q15024 291 aaKnown RBP10.05□□□□□ -0.8
TDP1-211ENST00000555178 TMEM164Q5U3C3 297 aa10.05□□□□□ -0.8
TDP1-211ENST00000555178 C1orf146Q5VVC0 180 aa10.05□□□□□ -0.8
TDP1-211ENST00000555178 TNFAIP8L2Q6P589 184 aaPredicted RBP10.05□□□□□ -0.8
TDP1-211ENST00000555178 CYP2R1Q6VVX0 501 aa10.05□□□□□ -0.8
TDP1-211ENST00000555178 DTX1Q86Y01 620 aa10.05□□□□□ -0.8
TDP1-211ENST00000555178 OR5D16Q8NGK9 328 aa10.05□□□□□ -0.8
TDP1-211ENST00000555178 ZFP28Q8NHY6 868 aa10.05□□□□□ -0.8
TDP1-211ENST00000555178 C16orf58Q96GQ5 468 aa10.05□□□□□ -0.8
TDP1-211ENST00000555178 OR1F2PQ96R84 312 aa10.05□□□□□ -0.8
TDP1-211ENST00000555178 KCTD14Q9BQ13 255 aaPredicted RBP10.05□□□□□ -0.8
TDP1-211ENST00000555178 ECSITQ9BQ95 431 aa10.05□□□□□ -0.8
TDP1-211ENST00000555178 ZPBPQ9BS86 351 aa10.05□□□□□ -0.8
TDP1-211ENST00000555178 SLC26A1Q9H2B4 701 aa10.05□□□□□ -0.8
TDP1-211ENST00000555178 MMADHCQ9H3L0 296 aaPredicted RBP10.05□□□□□ -0.8
TDP1-211ENST00000555178 WDR70Q9NW82 654 aa10.05□□□□□ -0.8
TDP1-211ENST00000555178 MAT2BQ9NZL9 334 aa10.05□□□□□ -0.8
TDP1-211ENST00000555178 PTRH2Q9Y3E5 179 aaKnown RBP10.05□□□□□ -0.8
TDP1-211ENST00000555178 EML6Q6ZMW3 1958 aa10.05□□□□□ -0.8
TDP1-211ENST00000555178 C15orf38-AP3S2A0A0A6YYH1 394 aa10.05□□□□□ -0.8
TDP1-211ENST00000555178 CLDN4O14493 209 aa10.05□□□□□ -0.8
TDP1-211ENST00000555178 TLX3O43711 291 aaPredicted RBP10.05□□□□□ -0.8
TDP1-211ENST00000555178 OR10H2O60403 315 aa10.05□□□□□ -0.8
TDP1-211ENST00000555178 ATP1B1P05026 303 aa10.05□□□□□ -0.8
TDP1-211ENST00000555178 ATP6V1B2P21281 511 aa10.05□□□□□ -0.8
TDP1-211ENST00000555178 AGXTP21549 392 aa10.05□□□□□ -0.8
TDP1-211ENST00000555178 RBMS1P29558 406 aaKnown RBP10.05□□□□□ -0.8
TDP1-211ENST00000555178 STAT5AP42229 794 aa10.05□□□□□ -0.8
TDP1-211ENST00000555178 CRATP43155 626 aa10.05□□□□□ -0.8
TDP1-211ENST00000555178 HSD17B7P56937 341 aa10.05□□□□□ -0.8
TDP1-211ENST00000555178 ELF3P78545 371 aaPredicted RBP10.05□□□□□ -0.8
TDP1-211ENST00000555178 LRRC74AQ0VAA2 488 aa10.05□□□□□ -0.8
TDP1-211ENST00000555178 IL10RAQ13651 578 aa10.05□□□□□ -0.8
TDP1-211ENST00000555178 RGNQ15493 299 aa10.05□□□□□ -0.8
TDP1-211ENST00000555178 ADRM1Q16186 407 aa10.05□□□□□ -0.8
TDP1-211ENST00000555178 PRICKLE4Q2TBC4 344 aa10.05□□□□□ -0.8
TDP1-211ENST00000555178 ATP1A1-AS1Q5TC04 95 aa10.05□□□□□ -0.8
TDP1-211ENST00000555178 SAXO2Q658L1 398 aa10.05□□□□□ -0.8
TDP1-211ENST00000555178 OLIG3Q7RTU3 272 aa10.05□□□□□ -0.8
TDP1-211ENST00000555178 C6orf120Q7Z4R8 191 aa10.05□□□□□ -0.8
TDP1-211ENST00000555178 ARPINQ7Z6K5 226 aa10.05□□□□□ -0.8
TDP1-211ENST00000555178 GALNT10Q86SR1 603 aa10.05□□□□□ -0.8
TDP1-211ENST00000555178 NLGN4XQ8N0W4 816 aa10.05□□□□□ -0.8
TDP1-211ENST00000555178 ARHGAP24Q8N264 748 aa10.05□□□□□ -0.8
TDP1-211ENST00000555178 HORMAD2Q8N7B1 307 aa10.05□□□□□ -0.8
TDP1-211ENST00000555178 TRIML2Q8N7C3 387 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms