RNA–Protein interactions for RNA: ENST00000555067.1

VRK1-203, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 604 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-203ENST00000555067 ZNF264O43296 627 aa4.62□□□□□ -1.67
VRK1-203ENST00000555067 LRRTM2O43300 516 aa4.62□□□□□ -1.67
VRK1-203ENST00000555067 BCAS1O75363 584 aaPredicted RBP4.62□□□□□ -1.67
VRK1-203ENST00000555067 NEBLO76041 1014 aa4.62□□□□□ -1.67
VRK1-203ENST00000555067 GSTA2P09210 222 aa4.62□□□□□ -1.67
VRK1-203ENST00000555067 CT45A8P0DMV1 189 aa4.62□□□□□ -1.67
VRK1-203ENST00000555067 CT45A9P0DMV2 189 aa4.62□□□□□ -1.67
VRK1-203ENST00000555067 PCMT1P22061 227 aa4.62□□□□□ -1.67
VRK1-203ENST00000555067 AHRP35869 848 aa4.62□□□□□ -1.67
VRK1-203ENST00000555067 GRIA1P42261 906 aa4.62□□□□□ -1.67
VRK1-203ENST00000555067 OR3A3P47888 321 aa4.62□□□□□ -1.67
VRK1-203ENST00000555067 CEBPDP49716 269 aaPredicted RBP4.62□□□□□ -1.67
VRK1-203ENST00000555067 PPT1P50897 306 aa4.62□□□□□ -1.67
VRK1-203ENST00000555067 NAPAP54920 295 aa4.62□□□□□ -1.67
VRK1-203ENST00000555067 CLDN17P56750 224 aa4.62□□□□□ -1.67
VRK1-203ENST00000555067 RPS8P62241 208 aaKnown RBP4.62□□□□□ -1.67
VRK1-203ENST00000555067 RPS18P62269 152 aaKnown RBP4.62□□□□□ -1.67
VRK1-203ENST00000555067 TMEM132DQ14C87 1099 aa4.62□□□□□ -1.67
VRK1-203ENST00000555067 P2RY14Q15391 338 aa4.62□□□□□ -1.67
VRK1-203ENST00000555067 CAMK4Q16566 473 aa4.62□□□□□ -1.67
VRK1-203ENST00000555067 TATDN3Q17R31 274 aa4.62□□□□□ -1.67
VRK1-203ENST00000555067 ZSWIM7Q19AV6 140 aa4.62□□□□□ -1.67
VRK1-203ENST00000555067 CT45A2Q5DJT8 189 aa4.62□□□□□ -1.67
VRK1-203ENST00000555067 WDR38Q5JTN6 314 aa4.62□□□□□ -1.67
VRK1-203ENST00000555067 PYHIN1Q6K0P9 492 aa4.62□□□□□ -1.67
VRK1-203ENST00000555067 CAPN13Q6MZZ7 669 aaPredicted RBP4.62□□□□□ -1.67
VRK1-203ENST00000555067 CORO6Q6QEF8 472 aa4.62□□□□□ -1.67
VRK1-203ENST00000555067 CYP4V2Q6ZWL3 525 aaPredicted RBP4.62□□□□□ -1.67
VRK1-203ENST00000555067 APLFQ8IW19 511 aaPredicted RBP4.62□□□□□ -1.67
VRK1-203ENST00000555067 EID3Q8N140 333 aa4.62□□□□□ -1.67
VRK1-203ENST00000555067 UBE2J2Q8N2K1 259 aa4.62□□□□□ -1.67
VRK1-203ENST00000555067 LRRC43Q8N309 656 aa4.62□□□□□ -1.67
VRK1-203ENST00000555067 ZNF321PQ8N8H1 164 aa4.62□□□□□ -1.67
VRK1-203ENST00000555067 C17orf47Q8NEP4 570 aa4.62□□□□□ -1.67
VRK1-203ENST00000555067 ZNF397Q8NF99 534 aaPredicted RBP4.62□□□□□ -1.67
VRK1-203ENST00000555067 RAB3IL1Q8TBN0 382 aa4.62□□□□□ -1.67
VRK1-203ENST00000555067 TRMT10AQ8TBZ6 339 aaKnown RBP4.62□□□□□ -1.67
VRK1-203ENST00000555067 NPY6RQ99463 290 aa4.62□□□□□ -1.67
VRK1-203ENST00000555067 MTG1Q9BT17 334 aaPredicted RBP4.62□□□□□ -1.67
VRK1-203ENST00000555067 URM1Q9BTM9 101 aaKnown RBP4.62□□□□□ -1.67
VRK1-203ENST00000555067 TMEM43Q9BTV4 400 aa4.62□□□□□ -1.67
VRK1-203ENST00000555067 RBM24Q9BX46 236 aaKnown RBP4.62□□□□□ -1.67
VRK1-203ENST00000555067 WWP1Q9H0M0 922 aa4.62□□□□□ -1.67
VRK1-203ENST00000555067 SLC26A1Q9H2B4 701 aa4.62□□□□□ -1.67
VRK1-203ENST00000555067 MTIF3Q9H2K0 278 aaKnown RBP4.62□□□□□ -1.67
VRK1-203ENST00000555067 EXO5Q9H790 373 aa4.62□□□□□ -1.67
VRK1-203ENST00000555067 SLC38A7Q9NVC3 462 aa4.62□□□□□ -1.67
VRK1-203ENST00000555067 ONECUT1Q9UBC0 465 aa4.62□□□□□ -1.67
VRK1-203ENST00000555067 MRTO4Q9UKD2 239 aaKnown RBP4.62□□□□□ -1.67
VRK1-203ENST00000555067 STUB1Q9UNE7 303 aa4.62□□□□□ -1.67
VRK1-203ENST00000555067 TMEM94Q12767 1356 aa4.62□□□□□ -1.67
VRK1-203ENST00000555067 PLEKHG2Q9H7P9 1386 aa4.62□□□□□ -1.67
VRK1-203ENST00000555067 PPIAL4DF5H284 164 aa4.61□□□□□ -1.67
VRK1-203ENST00000555067 FOXE1O00358 373 aaPredicted RBP4.61□□□□□ -1.67
VRK1-203ENST00000555067 ARPC3O15145 178 aa4.61□□□□□ -1.67
VRK1-203ENST00000555067 MLNRO43193 412 aa4.61□□□□□ -1.67
VRK1-203ENST00000555067 OR1F1O43749 312 aa4.61□□□□□ -1.67
VRK1-203ENST00000555067 DNAJB6O75190 326 aa4.61□□□□□ -1.67
VRK1-203ENST00000555067 SLITRK3O94933 977 aa4.61□□□□□ -1.67
VRK1-203ENST00000555067 AGTP01019 485 aa4.61□□□□□ -1.67
VRK1-203ENST00000555067 CHRNA1P02708 482 aa4.61□□□□□ -1.67
VRK1-203ENST00000555067 STAG3L3P0CL85 134 aa4.61□□□□□ -1.67
VRK1-203ENST00000555067 GP9P14770 177 aa4.61□□□□□ -1.67
VRK1-203ENST00000555067 ZNF44P15621 663 aa4.61□□□□□ -1.67
VRK1-203ENST00000555067 HOXD10P28358 340 aa4.61□□□□□ -1.67
VRK1-203ENST00000555067 CHRNB4P30926 498 aa4.61□□□□□ -1.67
VRK1-203ENST00000555067 CAPGP40121 348 aa4.61□□□□□ -1.67
VRK1-203ENST00000555067 CD151P48509 253 aa4.61□□□□□ -1.67
VRK1-203ENST00000555067 FNTAP49354 379 aa4.61□□□□□ -1.67
VRK1-203ENST00000555067 LIMK2P53671 638 aa4.61□□□□□ -1.67
VRK1-203ENST00000555067 B3GALT5-AS1P59052 145 aa4.61□□□□□ -1.67
VRK1-203ENST00000555067 RPL23AP62750 156 aaKnown RBP4.61□□□□□ -1.67
VRK1-203ENST00000555067 PJVKQ0ZLH3 352 aa4.61□□□□□ -1.67
VRK1-203ENST00000555067 CEACAM7Q14002 265 aa4.61□□□□□ -1.67
VRK1-203ENST00000555067 OPCMLQ14982 345 aa4.61□□□□□ -1.67
VRK1-203ENST00000555067 SLC1A5Q15758 541 aa4.61□□□□□ -1.67
VRK1-203ENST00000555067 CLPPQ16740 277 aaPredicted RBP4.61□□□□□ -1.67
VRK1-203ENST00000555067 EXOC3L2Q2M3D2 409 aa4.61□□□□□ -1.67
VRK1-203ENST00000555067 DCAF4L1Q3SXM0 396 aa4.61□□□□□ -1.67
VRK1-203ENST00000555067 GPR33Q49SQ1 333 aa4.61□□□□□ -1.67
VRK1-203ENST00000555067 MPPE1Q53F39 396 aa4.61□□□□□ -1.67
VRK1-203ENST00000555067 AADACL4Q5VUY2 407 aa4.61□□□□□ -1.67
VRK1-203ENST00000555067 ZSCAN25Q6NSZ9 544 aa4.61□□□□□ -1.67
VRK1-203ENST00000555067 C17orf107Q6ZR85 190 aa4.61□□□□□ -1.67
VRK1-203ENST00000555067 TMCO2Q7Z6W1 182 aaPredicted RBP4.61□□□□□ -1.67
VRK1-203ENST00000555067 SLC22A16Q86VW1 577 aa4.61□□□□□ -1.67
VRK1-203ENST00000555067 CCDC60Q8IWA6 550 aaPredicted RBP4.61□□□□□ -1.67
VRK1-203ENST00000555067 GPALPP1Q8IXQ4 340 aa4.61□□□□□ -1.67
VRK1-203ENST00000555067 ANKFN1Q8N957 763 aa4.61□□□□□ -1.67
VRK1-203ENST00000555067 DRAXINQ8NBI3 349 aaPredicted RBP4.61□□□□□ -1.67
VRK1-203ENST00000555067 MAPK1IP1LQ8NDC0 245 aa4.61□□□□□ -1.67
VRK1-203ENST00000555067 OR6M1Q8NGM8 313 aa4.61□□□□□ -1.67
VRK1-203ENST00000555067 STARD8Q92502 1023 aa4.61□□□□□ -1.67
VRK1-203ENST00000555067 PINX1Q96BK5 328 aaKnown RBP4.61□□□□□ -1.67
VRK1-203ENST00000555067 BPIFA2Q96DR5 249 aa4.61□□□□□ -1.67
VRK1-203ENST00000555067 S1PR3Q99500 378 aa4.61□□□□□ -1.67
VRK1-203ENST00000555067 AGPAT1Q99943 283 aa4.61□□□□□ -1.67
VRK1-203ENST00000555067 NDUFAF3Q9BU61 184 aa4.61□□□□□ -1.67
VRK1-203ENST00000555067 PANK2Q9BZ23 570 aa4.61□□□□□ -1.67
VRK1-203ENST00000555067 ZNF665Q9H7R5 613 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms