RNA–Protein interactions for RNA: ENST00000554971.6

SHOX-204, Transcript of short stature homeobox, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHOX, Length 1,902 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-204ENST00000554971 SH3PXD2BA1X283 911 aa16.39■□□□□ 0.21
SHOX-204ENST00000554971 ZBTB11O95625 1053 aaPredicted RBP16.39■□□□□ 0.21
SHOX-204ENST00000554971 ADRB1P08588 477 aa16.39■□□□□ 0.21
SHOX-204ENST00000554971 C1GALT1C1LP0DN25 315 aa16.39■□□□□ 0.21
SHOX-204ENST00000554971 CCL4P13236 92 aa16.39■□□□□ 0.21
SHOX-204ENST00000554971 MATN1P21941 496 aa16.39■□□□□ 0.21
SHOX-204ENST00000554971 PRKACGP22612 351 aa16.39■□□□□ 0.21
SHOX-204ENST00000554971 PIK3CBP42338 1070 aa16.39■□□□□ 0.21
SHOX-204ENST00000554971 PHEXP78562 749 aa16.39■□□□□ 0.21
SHOX-204ENST00000554971 DDX39BQ13838 428 aaKnown RBP16.39■□□□□ 0.21
SHOX-204ENST00000554971 RGNQ15493 299 aa16.39■□□□□ 0.21
SHOX-204ENST00000554971 FCRL6Q6DN72 434 aa16.39■□□□□ 0.21
SHOX-204ENST00000554971 CARFQ8N187 725 aa16.39■□□□□ 0.21
SHOX-204ENST00000554971 C11orf65Q8NCR3 313 aa16.39■□□□□ 0.21
SHOX-204ENST00000554971 B4GALNT2Q8NHY0 566 aa16.39■□□□□ 0.21
SHOX-204ENST00000554971 PUM2Q8TB72 1066 aaKnown RBP eCLIP16.39■□□□□ 0.21
SHOX-204ENST00000554971 LHPPQ9H008 270 aa16.39■□□□□ 0.21
SHOX-204ENST00000554971 RAD21L1Q9H4I0 556 aa16.39■□□□□ 0.21
SHOX-204ENST00000554971 REEP4Q9H6H4 257 aa16.39■□□□□ 0.21
SHOX-204ENST00000554971 PADI2Q9Y2J8 665 aa16.39■□□□□ 0.21
SHOX-204ENST00000554971 WBP11Q9Y2W2 641 aaKnown RBP16.39■□□□□ 0.21
SHOX-204ENST00000554971 PCDHGB3Q9Y5G1 929 aa16.39■□□□□ 0.21
SHOX-204ENST00000554971 KLK4Q9Y5K2 254 aa16.39■□□□□ 0.21
SHOX-204ENST00000554971 MGAQ8IWI9 3026 aa16.38■□□□□ 0.21
SHOX-204ENST00000554971 SUV39H1O43463 412 aa16.38■□□□□ 0.21
SHOX-204ENST00000554971 IL7RP16871 459 aa16.38■□□□□ 0.21
SHOX-204ENST00000554971 MVKQ03426 396 aa16.38■□□□□ 0.21
SHOX-204ENST00000554971 ZNF763Q0D2J5 394 aa16.38■□□□□ 0.21
SHOX-204ENST00000554971 LAIR2Q6ISS4 152 aa16.38■□□□□ 0.21
SHOX-204ENST00000554971 FAHD1Q6P587 224 aa16.38■□□□□ 0.21
SHOX-204ENST00000554971 LCTLQ6UWM7 567 aa16.38■□□□□ 0.21
SHOX-204ENST00000554971 CYP4Z1Q86W10 505 aa16.38■□□□□ 0.21
SHOX-204ENST00000554971 D2HGDHQ8N465 521 aa16.38■□□□□ 0.21
SHOX-204ENST00000554971 C19orf47Q8N9M1 422 aaKnown RBP16.38■□□□□ 0.21
SHOX-204ENST00000554971 NEIL2Q969S2 332 aa16.38■□□□□ 0.21
SHOX-204ENST00000554971 PMEPA1Q969W9 287 aa16.38■□□□□ 0.21
SHOX-204ENST00000554971 HSH2DQ96JZ2 352 aa16.38■□□□□ 0.21
SHOX-204ENST00000554971 DCUN1D5Q9BTE7 237 aa16.38■□□□□ 0.21
SHOX-204ENST00000554971 DPH7Q9BTV6 452 aa16.38■□□□□ 0.21
SHOX-204ENST00000554971 DUSP21Q9H596 190 aa16.38■□□□□ 0.21
SHOX-204ENST00000554971 NDRG4Q9ULP0 352 aaKnown RBP16.38■□□□□ 0.21
SHOX-204ENST00000554971 A0A1W2PPW3 197 aa16.37■□□□□ 0.21
SHOX-204ENST00000554971 PCDH7O60245 1069 aa16.37■□□□□ 0.21
SHOX-204ENST00000554971 CTSVO60911 334 aa16.37■□□□□ 0.21
SHOX-204ENST00000554971 ANGPTL1O95841 491 aa16.37■□□□□ 0.21
SHOX-204ENST00000554971 BCL10O95999 233 aa16.37■□□□□ 0.21
SHOX-204ENST00000554971 FOLR1P15328 257 aa16.37■□□□□ 0.21
SHOX-204ENST00000554971 ETV5P41161 510 aa16.37■□□□□ 0.21
SHOX-204ENST00000554971 DAPP51397 102 aa16.37■□□□□ 0.21
SHOX-204ENST00000554971 PLA2G16P53816 162 aa16.37■□□□□ 0.21
SHOX-204ENST00000554971 IKBIPQ70UQ0 350 aa16.37■□□□□ 0.21
SHOX-204ENST00000554971 RAB11FIP2Q7L804 512 aa16.37■□□□□ 0.21
SHOX-204ENST00000554971 ANKRD13BQ86YJ7 626 aa16.37■□□□□ 0.21
SHOX-204ENST00000554971 CLECL1Q8IZS7 167 aa16.37■□□□□ 0.21
SHOX-204ENST00000554971 NATD1Q8N6N6 113 aa16.37■□□□□ 0.21
SHOX-204ENST00000554971 TBC1D15Q8TC07 691 aa16.37■□□□□ 0.21
SHOX-204ENST00000554971 ZNF347Q96SE7 839 aa16.37■□□□□ 0.21
SHOX-204ENST00000554971 DOHHQ9BU89 302 aa16.37■□□□□ 0.21
SHOX-204ENST00000554971 MRPS30Q9NP92 439 aaKnown RBP16.37■□□□□ 0.21
SHOX-204ENST00000554971 ABCG2Q9UNQ0 655 aa16.37■□□□□ 0.21
SHOX-204ENST00000554971 SATB2Q9UPW6 733 aa16.37■□□□□ 0.21
SHOX-204ENST00000554971 SAMHD1Q9Y3Z3 626 aaKnown RBP16.37■□□□□ 0.21
SHOX-204ENST00000554971 LOXL2Q9Y4K0 774 aa16.37■□□□□ 0.21
SHOX-204ENST00000554971 U3KQV3 271 aa16.37■□□□□ 0.21
SHOX-204ENST00000554971 GNG14A0A1W2PPG7 69 aa16.37■□□□□ 0.21
SHOX-204ENST00000554971 A8MVJ9 347 aa16.37■□□□□ 0.21
SHOX-204ENST00000554971 B3GALT4O96024 378 aa16.37■□□□□ 0.21
SHOX-204ENST00000554971 CTSBP07858 339 aa16.37■□□□□ 0.21
SHOX-204ENST00000554971 HTR1AP08908 422 aa16.37■□□□□ 0.21
SHOX-204ENST00000554971 GABRA4P48169 554 aa16.37■□□□□ 0.21
SHOX-204ENST00000554971 HSD11B2P80365 405 aa16.37■□□□□ 0.21
SHOX-204ENST00000554971 IL5RAQ01344 420 aa16.37■□□□□ 0.21
SHOX-204ENST00000554971 FADDQ13158 208 aa16.37■□□□□ 0.21
SHOX-204ENST00000554971 PDE7AQ13946 482 aa16.37■□□□□ 0.21
SHOX-204ENST00000554971 C3orf38Q5JPI3 329 aa16.37■□□□□ 0.21
SHOX-204ENST00000554971 FGD3Q5JSP0 725 aa16.37■□□□□ 0.21
SHOX-204ENST00000554971 ZNF425Q6IV72 752 aa16.37■□□□□ 0.21
SHOX-204ENST00000554971 ANKRD26P1Q6NSI1 321 aa16.37■□□□□ 0.21
SHOX-204ENST00000554971 SLC30A8Q8IWU4 369 aa16.37■□□□□ 0.21
SHOX-204ENST00000554971 AGBL5Q8NDL9 886 aa16.37■□□□□ 0.21
SHOX-204ENST00000554971 FNDC8Q8TC99 324 aa16.37■□□□□ 0.21
SHOX-204ENST00000554971 IPCEF1Q8WWN9 437 aaPredicted RBP16.37■□□□□ 0.21
SHOX-204ENST00000554971 FCRL4Q96PJ5 515 aa16.37■□□□□ 0.21
SHOX-204ENST00000554971 PITX2Q99697 317 aa16.37■□□□□ 0.21
SHOX-204ENST00000554971 CMKLR1Q99788 373 aa16.37■□□□□ 0.21
SHOX-204ENST00000554971 STRADBQ9C0K7 418 aa16.37■□□□□ 0.21
SHOX-204ENST00000554971 MYNNQ9NPC7 610 aa16.37■□□□□ 0.21
SHOX-204ENST00000554971 TBC1D23Q9NUY8 699 aa16.37■□□□□ 0.21
SHOX-204ENST00000554971 VNN3Q9NY84 501 aa16.37■□□□□ 0.21
SHOX-204ENST00000554971 PDP1Q9P0J1 537 aaPredicted RBP16.37■□□□□ 0.21
SHOX-204ENST00000554971 ERVK-11Q9UQG0 969 aa16.37■□□□□ 0.21
SHOX-204ENST00000554971 OR2A25A4D2G3 310 aa16.36■□□□□ 0.21
SHOX-204ENST00000554971 ZNF99A8MXY4 864 aaPredicted RBP16.36■□□□□ 0.21
SHOX-204ENST00000554971 E9PQ18 207 aa16.36■□□□□ 0.21
SHOX-204ENST00000554971 H7BY64 318 aa16.36■□□□□ 0.21
SHOX-204ENST00000554971 ETHE1O95571 254 aa16.36■□□□□ 0.21
SHOX-204ENST00000554971 IFNA14P01570 189 aa16.36■□□□□ 0.21
SHOX-204ENST00000554971 DDX5P17844 614 aaKnown RBP16.36■□□□□ 0.21
SHOX-204ENST00000554971 PCMT1P22061 227 aa16.36■□□□□ 0.21
SHOX-204ENST00000554971 CSTF2P33240 577 aaKnown RBP eCLIP16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms