RNA–Protein interactions for RNA: ENST00000554811.5

XRCC3-208, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 2

Gene XRCC3, Length 3,668 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-208ENST00000554811 FCER2P06734 321 aa11.23□□□□□ -0.61
XRCC3-208ENST00000554811 OSMP13725 252 aa11.23□□□□□ -0.61
XRCC3-208ENST00000554811 PTPN2P17706 415 aa11.23□□□□□ -0.61
XRCC3-208ENST00000554811 CD72P21854 359 aa11.23□□□□□ -0.61
XRCC3-208ENST00000554811 APEX1P27695 318 aaKnown RBP11.23□□□□□ -0.61
XRCC3-208ENST00000554811 SOX18P35713 384 aa11.23□□□□□ -0.61
XRCC3-208ENST00000554811 RPL3P39023 403 aaKnown RBP11.23□□□□□ -0.61
XRCC3-208ENST00000554811 RPS25P62851 125 aaKnown RBP11.23□□□□□ -0.61
XRCC3-208ENST00000554811 SLC7A9P82251 487 aa11.23□□□□□ -0.61
XRCC3-208ENST00000554811 CSTF1Q05048 431 aaKnown RBP11.23□□□□□ -0.61
XRCC3-208ENST00000554811 ATAD3CQ5T2N8 411 aa11.23□□□□□ -0.61
XRCC3-208ENST00000554811 IDNKQ5T6J7 187 aa11.23□□□□□ -0.61
XRCC3-208ENST00000554811 NDUFAF5Q5TEU4 345 aa11.23□□□□□ -0.61
XRCC3-208ENST00000554811 FAM46CQ5VWP2 391 aa11.23□□□□□ -0.61
XRCC3-208ENST00000554811 ACSM5Q6NUN0 579 aa11.23□□□□□ -0.61
XRCC3-208ENST00000554811 TCTN3Q6NUS6 607 aa11.23□□□□□ -0.61
XRCC3-208ENST00000554811 MSANTD1Q6ZTZ1 278 aa11.23□□□□□ -0.61
XRCC3-208ENST00000554811 OR6T1Q8NGN1 323 aa11.23□□□□□ -0.61
XRCC3-208ENST00000554811 BBS10Q8TAM1 723 aa11.23□□□□□ -0.61
XRCC3-208ENST00000554811 RNFT2Q96EX2 444 aa11.23□□□□□ -0.61
XRCC3-208ENST00000554811 TEFMQ96QE5 360 aaKnown RBP11.23□□□□□ -0.61
XRCC3-208ENST00000554811 LYSMD1Q96S90 227 aa11.23□□□□□ -0.61
XRCC3-208ENST00000554811 PITX2Q99697 317 aa11.23□□□□□ -0.61
XRCC3-208ENST00000554811 LGR4Q9BXB1 951 aa11.23□□□□□ -0.61
XRCC3-208ENST00000554811 GABARAPL3Q9BY60 117 aa11.23□□□□□ -0.61
XRCC3-208ENST00000554811 CPEB1Q9BZB8 566 aaKnown RBP11.23□□□□□ -0.61
XRCC3-208ENST00000554811 NKIRAS2Q9NYR9 191 aa11.23□□□□□ -0.61
XRCC3-208ENST00000554811 NLKQ9UBE8 527 aa11.23□□□□□ -0.61
XRCC3-208ENST00000554811 NPIPA5A0A0B4J1W7 369 aa11.23□□□□□ -0.61
XRCC3-208ENST00000554811 NPIPA7E9PJI5 369 aa11.23□□□□□ -0.61
XRCC3-208ENST00000554811 FFAR1O14842 300 aa11.23□□□□□ -0.61
XRCC3-208ENST00000554811 TMPRSS11DO60235 418 aa11.23□□□□□ -0.61
XRCC3-208ENST00000554811 NPIPA8P0DM63 369 aa11.23□□□□□ -0.61
XRCC3-208ENST00000554811 ELAVL4P26378 380 aaKnown RBP11.23□□□□□ -0.61
XRCC3-208ENST00000554811 ZNF544Q6NX49 715 aa11.23□□□□□ -0.61
XRCC3-208ENST00000554811 CNKSR3Q6P9H4 555 aa11.23□□□□□ -0.61
XRCC3-208ENST00000554811 SLC9B2Q86UD5 537 aa11.23□□□□□ -0.61
XRCC3-208ENST00000554811 NUDT13Q86X67 352 aa11.23□□□□□ -0.61
XRCC3-208ENST00000554811 TMEFF1Q8IYR6 380 aa11.23□□□□□ -0.61
XRCC3-208ENST00000554811 CHCHD4Q8N4Q1 142 aa11.23□□□□□ -0.61
XRCC3-208ENST00000554811 OR52E4Q8NGH9 312 aa11.23□□□□□ -0.61
XRCC3-208ENST00000554811 PIK3R3Q92569 461 aa11.23□□□□□ -0.61
XRCC3-208ENST00000554811 OPALINQ96PE5 141 aa11.23□□□□□ -0.61
XRCC3-208ENST00000554811 MND1Q9BWT6 205 aa11.23□□□□□ -0.61
XRCC3-208ENST00000554811 GMFGO60234 142 aa11.23□□□□□ -0.61
XRCC3-208ENST00000554811 FGBP02675 491 aa11.23□□□□□ -0.61
XRCC3-208ENST00000554811 IL7P13232 177 aa11.23□□□□□ -0.61
XRCC3-208ENST00000554811 CEBPBP17676 345 aa11.23□□□□□ -0.61
XRCC3-208ENST00000554811 KCNC3Q14003 757 aa11.23□□□□□ -0.61
XRCC3-208ENST00000554811 ARHGEF6Q15052 776 aa11.23□□□□□ -0.61
XRCC3-208ENST00000554811 ZNF311Q5JNZ3 666 aa11.23□□□□□ -0.61
XRCC3-208ENST00000554811 KHDRBS2Q5VWX1 349 aaKnown RBP11.23□□□□□ -0.61
XRCC3-208ENST00000554811 FAM71E1Q6IPT2 247 aa11.23□□□□□ -0.61
XRCC3-208ENST00000554811 CPXM2Q8N436 756 aa11.23□□□□□ -0.61
XRCC3-208ENST00000554811 SLAIN1Q8ND83 568 aa11.23□□□□□ -0.61
XRCC3-208ENST00000554811 OR4D11Q8NGI4 311 aa11.23□□□□□ -0.61
XRCC3-208ENST00000554811 ARRDC3Q96B67 414 aa11.23□□□□□ -0.61
XRCC3-208ENST00000554811 ADAP2Q9NPF8 381 aa11.23□□□□□ -0.61
XRCC3-208ENST00000554811 P2RX2Q9UBL9 471 aa11.23□□□□□ -0.61
XRCC3-208ENST00000554811 CMAHPQ9Y471 501 aa11.23□□□□□ -0.61
XRCC3-208ENST00000554811 SCN8AQ9UQD0 1980 aa11.23□□□□□ -0.61
XRCC3-208ENST00000554811 IGLV3-16A0A075B6K0 115 aa11.22□□□□□ -0.61
XRCC3-208ENST00000554811 ZC3H12DA2A288 527 aaKnown RBP11.22□□□□□ -0.61
XRCC3-208ENST00000554811 PRRT4C9JH25 899 aa11.22□□□□□ -0.61
XRCC3-208ENST00000554811 SLC30A4O14863 429 aa11.22□□□□□ -0.61
XRCC3-208ENST00000554811 UGDHO60701 494 aa11.22□□□□□ -0.61
XRCC3-208ENST00000554811 LATS1O95835 1130 aa11.22□□□□□ -0.61
XRCC3-208ENST00000554811 PRNPP04156 253 aa11.22□□□□□ -0.61
XRCC3-208ENST00000554811 HMGN2P05204 90 aaKnown RBP11.22□□□□□ -0.61
XRCC3-208ENST00000554811 HSD3B1P14060 373 aa11.22□□□□□ -0.61
XRCC3-208ENST00000554811 ZNF24P17028 368 aa11.22□□□□□ -0.61
XRCC3-208ENST00000554811 HOXB6P17509 224 aaKnown RBP11.22□□□□□ -0.61
XRCC3-208ENST00000554811 PAICSP22234 425 aaKnown RBP11.22□□□□□ -0.61
XRCC3-208ENST00000554811 HSD3B2P26439 372 aa11.22□□□□□ -0.61
XRCC3-208ENST00000554811 NOS3P29474 1203 aa11.22□□□□□ -0.61
XRCC3-208ENST00000554811 MMP12P39900 470 aa11.22□□□□□ -0.61
XRCC3-208ENST00000554811 ETV5P41161 510 aa11.22□□□□□ -0.61
XRCC3-208ENST00000554811 ETV1P50549 477 aa11.22□□□□□ -0.61
XRCC3-208ENST00000554811 CCR8P51685 355 aa11.22□□□□□ -0.61
XRCC3-208ENST00000554811 DOC2BQ14184 412 aa11.22□□□□□ -0.61
XRCC3-208ENST00000554811 MTSS1LQ765P7 747 aa11.22□□□□□ -0.61
XRCC3-208ENST00000554811 VRK2Q86Y07 508 aa11.22□□□□□ -0.61
XRCC3-208ENST00000554811 POF1BQ8WVV4 589 aa11.22□□□□□ -0.61
XRCC3-208ENST00000554811 ZFPM2Q8WW38 1151 aa11.22□□□□□ -0.61
XRCC3-208ENST00000554811 TMCO6Q96DC7 493 aa11.22□□□□□ -0.61
XRCC3-208ENST00000554811 MED20Q9H944 212 aa11.22□□□□□ -0.61
XRCC3-208ENST00000554811 HHATLQ9HCP6 504 aa11.22□□□□□ -0.61
XRCC3-208ENST00000554811 MAT2BQ9NZL9 334 aa11.22□□□□□ -0.61
XRCC3-208ENST00000554811 GSTK1Q9Y2Q3 226 aa11.22□□□□□ -0.61
XRCC3-208ENST00000554811 N6AMT1Q9Y5N5 214 aa11.22□□□□□ -0.61
XRCC3-208ENST00000554811 DOCK9Q9BZ29 2069 aa11.22□□□□□ -0.61
XRCC3-208ENST00000554811 TANC1Q9C0D5 1861 aa11.22□□□□□ -0.61
XRCC3-208ENST00000554811 CAPN5O15484 640 aaPredicted RBP11.22□□□□□ -0.61
XRCC3-208ENST00000554811 PTTG1O95997 202 aa11.22□□□□□ -0.61
XRCC3-208ENST00000554811 SLC2A2P11168 524 aaPredicted RBP11.22□□□□□ -0.61
XRCC3-208ENST00000554811 KELP23276 732 aa11.22□□□□□ -0.61
XRCC3-208ENST00000554811 CD79BP40259 229 aa11.22□□□□□ -0.61
XRCC3-208ENST00000554811 CDH11P55287 796 aa11.22□□□□□ -0.61
XRCC3-208ENST00000554811 RBBP4Q09028 425 aa11.22□□□□□ -0.61
XRCC3-208ENST00000554811 CDKL4Q5MAI5 379 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms