RNA–Protein interactions for RNA: ENST00000554615.1

SEC23A-207, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 1 (best)

Gene SEC23A, Length 3,813 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-207ENST00000554615 SLC6A20Q9NP91 592 aa3.24□□□□□ -1.89
SEC23A-207ENST00000554615 EXD2Q9NVH0 621 aa3.24□□□□□ -1.89
SEC23A-207ENST00000554615 LYARQ9NX58 379 aaKnown RBP3.24□□□□□ -1.89
SEC23A-207ENST00000554615 ACTR10Q9NZ32 417 aa3.24□□□□□ -1.89
SEC23A-207ENST00000554615 PTGFRNQ9P2B2 879 aa3.24□□□□□ -1.89
SEC23A-207ENST00000554615 FBXL21Q9UKT6 434 aa3.24□□□□□ -1.89
SEC23A-207ENST00000554615 CAB39Q9Y376 341 aaPredicted RBP3.24□□□□□ -1.89
SEC23A-207ENST00000554615 PCDHGC4Q9Y5F7 938 aa3.24□□□□□ -1.89
SEC23A-207ENST00000554615 NOX1Q9Y5S8 564 aa3.24□□□□□ -1.89
SEC23A-207ENST00000554615 SCN3AQ9NY46 2000 aa3.24□□□□□ -1.89
SEC23A-207ENST00000554615 A0A0G2JMP0 313 aa3.24□□□□□ -1.89
SEC23A-207ENST00000554615 EDDM13A0A1B0GTR0 161 aa3.24□□□□□ -1.89
SEC23A-207ENST00000554615 LRIT2A6NDA9 550 aa3.24□□□□□ -1.89
SEC23A-207ENST00000554615 MGAT4DA6NG13 374 aa3.24□□□□□ -1.89
SEC23A-207ENST00000554615 BLOC1S5-TXNDC5H3BN57 136 aa3.24□□□□□ -1.89
SEC23A-207ENST00000554615 K7ERQ8 282 aa3.24□□□□□ -1.89
SEC23A-207ENST00000554615 CCL22O00626 93 aa3.24□□□□□ -1.89
SEC23A-207ENST00000554615 TO15178 435 aa3.24□□□□□ -1.89
SEC23A-207ENST00000554615 PRKYO43930 277 aa3.24□□□□□ -1.89
SEC23A-207ENST00000554615 OR2A4O95047 310 aa3.24□□□□□ -1.89
SEC23A-207ENST00000554615 KRT75O95678 551 aa3.24□□□□□ -1.89
SEC23A-207ENST00000554615 B3GALT4O96024 378 aa3.24□□□□□ -1.89
SEC23A-207ENST00000554615 C1QBP02746 253 aa3.24□□□□□ -1.89
SEC23A-207ENST00000554615 CYP17A1P05093 508 aa3.24□□□□□ -1.89
SEC23A-207ENST00000554615 ALPIP09923 528 aa3.24□□□□□ -1.89
SEC23A-207ENST00000554615 CPN1P15169 458 aa3.24□□□□□ -1.89
SEC23A-207ENST00000554615 GADD45AP24522 165 aa3.24□□□□□ -1.89
SEC23A-207ENST00000554615 GATMP50440 423 aa3.24□□□□□ -1.89
SEC23A-207ENST00000554615 MMP15P51511 669 aa3.24□□□□□ -1.89
SEC23A-207ENST00000554615 MAPK10P53779 464 aa3.24□□□□□ -1.89
SEC23A-207ENST00000554615 CSNK1G2P78368 415 aa3.24□□□□□ -1.89
SEC23A-207ENST00000554615 NOGQ13253 232 aa3.24□□□□□ -1.89
SEC23A-207ENST00000554615 BIKQ13323 160 aa3.24□□□□□ -1.89
SEC23A-207ENST00000554615 GAS6Q14393 721 aa3.24□□□□□ -1.89
SEC23A-207ENST00000554615 EXOC3L2Q2M3D2 409 aa3.24□□□□□ -1.89
SEC23A-207ENST00000554615 HNRNPA1L2Q32P51 320 aaKnown RBP3.24□□□□□ -1.89
SEC23A-207ENST00000554615 CCDC58Q4VC31 144 aa3.24□□□□□ -1.89
SEC23A-207ENST00000554615 C9orf50Q5SZB4 431 aa3.24□□□□□ -1.89
SEC23A-207ENST00000554615 RPL13AP3Q6NVV1 102 aa3.24□□□□□ -1.89
SEC23A-207ENST00000554615 SLC48A1Q6P1K1 146 aa3.24□□□□□ -1.89
SEC23A-207ENST00000554615 MED27Q6P2C8 311 aa3.24□□□□□ -1.89
SEC23A-207ENST00000554615 ZNF793Q6ZN11 406 aa3.24□□□□□ -1.89
SEC23A-207ENST00000554615 MBOAT2Q6ZWT7 520 aa3.24□□□□□ -1.89
SEC23A-207ENST00000554615 HEATR4Q86WZ0 1026 aa3.24□□□□□ -1.89
SEC23A-207ENST00000554615 CYP4Z2PQ8N1L4 340 aa3.24□□□□□ -1.89
SEC23A-207ENST00000554615 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP3.24□□□□□ -1.89
SEC23A-207ENST00000554615 SNRNP27Q8WVK2 155 aaKnown RBP3.24□□□□□ -1.89
SEC23A-207ENST00000554615 HSD17B8Q92506 261 aa3.24□□□□□ -1.89
SEC23A-207ENST00000554615 TM9SF4Q92544 642 aa3.24□□□□□ -1.89
SEC23A-207ENST00000554615 AP2M1Q96CW1 435 aa3.24□□□□□ -1.89
SEC23A-207ENST00000554615 TMEM80Q96HE8 168 aa3.24□□□□□ -1.89
SEC23A-207ENST00000554615 OR2A7Q96R45 310 aa3.24□□□□□ -1.89
SEC23A-207ENST00000554615 ZBTB18Q99592 522 aa3.24□□□□□ -1.89
SEC23A-207ENST00000554615 HEPHQ9BQS7 1158 aa3.24□□□□□ -1.89
SEC23A-207ENST00000554615 GON7Q9BXV9 100 aa3.24□□□□□ -1.89
SEC23A-207ENST00000554615 REG4Q9BYZ8 158 aa3.24□□□□□ -1.89
SEC23A-207ENST00000554615 SLC19A3Q9BZV2 496 aa3.24□□□□□ -1.89
SEC23A-207ENST00000554615 S1PR5Q9H228 398 aa3.24□□□□□ -1.89
SEC23A-207ENST00000554615 CAAP1Q9H8G2 361 aa3.24□□□□□ -1.89
SEC23A-207ENST00000554615 SMURF1Q9HCE7 757 aa3.24□□□□□ -1.89
SEC23A-207ENST00000554615 CUEDC1Q9NWM3 386 aaPredicted RBP3.24□□□□□ -1.89
SEC23A-207ENST00000554615 ABI2Q9NYB9 513 aaPredicted RBP3.24□□□□□ -1.89
SEC23A-207ENST00000554615 BAIAP2Q9UQB8 552 aa3.24□□□□□ -1.89
SEC23A-207ENST00000554615 FCF1Q9Y324 198 aaKnown RBP3.24□□□□□ -1.89
SEC23A-207ENST00000554615 ATP6AP2A0A1C7CYW4 349 aa3.23□□□□□ -1.89
SEC23A-207ENST00000554615 RPS10-NUDT3A0A1W2PQS6 291 aa3.23□□□□□ -1.89
SEC23A-207ENST00000554615 SHISA3A0PJX4 238 aa3.23□□□□□ -1.89
SEC23A-207ENST00000554615 OR2M5A3KFT3 312 aa3.23□□□□□ -1.89
SEC23A-207ENST00000554615 IQCF5A8MTL0 148 aa3.23□□□□□ -1.89
SEC23A-207ENST00000554615 TNFRSF10CO14798 259 aa3.23□□□□□ -1.89
SEC23A-207ENST00000554615 TEX28O15482 410 aa3.23□□□□□ -1.89
SEC23A-207ENST00000554615 PRODHO43272 600 aa3.23□□□□□ -1.89
SEC23A-207ENST00000554615 LATO43561 262 aa3.23□□□□□ -1.89
SEC23A-207ENST00000554615 ATG13O75143 517 aa3.23□□□□□ -1.89
SEC23A-207ENST00000554615 ATP6AP2O75787 350 aa3.23□□□□□ -1.89
SEC23A-207ENST00000554615 NTN1O95631 604 aa3.23□□□□□ -1.89
SEC23A-207ENST00000554615 MYCP01106 439 aaPredicted RBP3.23□□□□□ -1.89
SEC23A-207ENST00000554615 INHAP05111 366 aa3.23□□□□□ -1.89
SEC23A-207ENST00000554615 OR12D1P0DN82 309 aa3.23□□□□□ -1.89
SEC23A-207ENST00000554615 ITGB8P26012 769 aa3.23□□□□□ -1.89
SEC23A-207ENST00000554615 RBMS1P29558 406 aaKnown RBP3.23□□□□□ -1.89
SEC23A-207ENST00000554615 KIR2DL1P43626 348 aaPredicted RBP3.23□□□□□ -1.89
SEC23A-207ENST00000554615 GPR4P46093 362 aa3.23□□□□□ -1.89
SEC23A-207ENST00000554615 SLC25A1P53007 311 aa3.23□□□□□ -1.89
SEC23A-207ENST00000554615 CRISP3P54108 245 aa3.23□□□□□ -1.89
SEC23A-207ENST00000554615 SMIM11AP58511 58 aa3.23□□□□□ -1.89
SEC23A-207ENST00000554615 TBPL1P62380 186 aa3.23□□□□□ -1.89
SEC23A-207ENST00000554615 SP3Q02447 781 aa3.23□□□□□ -1.89
SEC23A-207ENST00000554615 TWF1Q12792 350 aa3.23□□□□□ -1.89
SEC23A-207ENST00000554615 DYRK1AQ13627 763 aa3.23□□□□□ -1.89
SEC23A-207ENST00000554615 CDK5R1Q15078 307 aa3.23□□□□□ -1.89
SEC23A-207ENST00000554615 KCNJ8Q15842 424 aa3.23□□□□□ -1.89
SEC23A-207ENST00000554615 RBBP7Q16576 425 aa3.23□□□□□ -1.89
SEC23A-207ENST00000554615 CPEB4Q17RY0 729 aaKnown RBP eCLIP3.23□□□□□ -1.89
SEC23A-207ENST00000554615 Q5BKY6 102 aa3.23□□□□□ -1.89
SEC23A-207ENST00000554615 SLC25A53Q5H9E4 307 aa3.23□□□□□ -1.89
SEC23A-207ENST00000554615 CDC73Q6P1J9 531 aa3.23□□□□□ -1.89
SEC23A-207ENST00000554615 LINGO4Q6UY18 593 aa3.23□□□□□ -1.89
SEC23A-207ENST00000554615 LIN28BQ6ZN17 250 aaKnown RBP eCLIP3.23□□□□□ -1.894e-22■■■■■ 176.8
SEC23A-207ENST00000554615 FRRS1Q6ZNA5 592 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms