RNA–Protein interactions for RNA: ENST00000554604.5

SHMT2-214, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-214ENST00000554604 C1orf109Q9NX04 203 aa11.64□□□□□ -0.55
SHMT2-214ENST00000554604 PLA2G3Q9NZ20 509 aa11.64□□□□□ -0.55
SHMT2-214ENST00000554604 STMN3Q9NZ72 180 aa11.64□□□□□ -0.55
SHMT2-214ENST00000554604 POLR3HQ9Y535 204 aaPredicted RBP11.64□□□□□ -0.55
SHMT2-214ENST00000554604 MYO7BQ6PIF6 2116 aa11.63□□□□□ -0.55
SHMT2-214ENST00000554604 TRAV17A0A0B4J275 112 aa11.63□□□□□ -0.55
SHMT2-214ENST00000554604 PRSS51A0A1B0GVH4 220 aa11.63□□□□□ -0.55
SHMT2-214ENST00000554604 ANKUB1A6NFN9 424 aa11.63□□□□□ -0.55
SHMT2-214ENST00000554604 NME4O00746 187 aa11.63□□□□□ -0.55
SHMT2-214ENST00000554604 ERI3O43414 337 aaKnown RBP11.63□□□□□ -0.55
SHMT2-214ENST00000554604 PEX1O43933 1283 aa11.63□□□□□ -0.55
SHMT2-214ENST00000554604 PRMT3O60678 531 aa11.63□□□□□ -0.55
SHMT2-214ENST00000554604 RSL1D1O76021 490 aaKnown RBP11.63□□□□□ -0.55
SHMT2-214ENST00000554604 STAMBPO95630 424 aa11.63□□□□□ -0.55
SHMT2-214ENST00000554604 F10P00742 488 aa11.63□□□□□ -0.55
SHMT2-214ENST00000554604 G6PDP11413 515 aa11.63□□□□□ -0.55
SHMT2-214ENST00000554604 ZNF10P21506 573 aaPredicted RBP11.63□□□□□ -0.55
SHMT2-214ENST00000554604 IL12AP29459 219 aa11.63□□□□□ -0.55
SHMT2-214ENST00000554604 ERFP50548 548 aa11.63□□□□□ -0.55
SHMT2-214ENST00000554604 TNFSF10P50591 281 aa11.63□□□□□ -0.55
SHMT2-214ENST00000554604 RPL38P63173 70 aaKnown RBP11.63□□□□□ -0.55
SHMT2-214ENST00000554604 BTN3A2P78410 334 aa11.63□□□□□ -0.55
SHMT2-214ENST00000554604 SRSF1Q07955 248 aaKnown RBP eCLIP11.63□□□□□ -0.55
SHMT2-214ENST00000554604 HYAL2Q12891 473 aa11.63□□□□□ -0.55
SHMT2-214ENST00000554604 BNIP2Q12982 314 aa11.63□□□□□ -0.55
SHMT2-214ENST00000554604 NFYCQ13952 458 aa11.63□□□□□ -0.55
SHMT2-214ENST00000554604 HIST2H2ACQ16777 129 aaPredicted RBP11.63□□□□□ -0.55
SHMT2-214ENST00000554604 IMPG1Q17R60 797 aa11.63□□□□□ -0.55
SHMT2-214ENST00000554604 PAGE2BQ5JRK9 111 aa11.63□□□□□ -0.55
SHMT2-214ENST00000554604 HIST2H2AA3Q6FI13 130 aa11.63□□□□□ -0.55
SHMT2-214ENST00000554604 PAPD4Q6PIY7 484 aaKnown RBP11.63□□□□□ -0.55
SHMT2-214ENST00000554604 FAM180AQ6UWF9 173 aa11.63□□□□□ -0.55
SHMT2-214ENST00000554604 SLC15A3Q8IY34 581 aa11.63□□□□□ -0.55
SHMT2-214ENST00000554604 PQLC1Q8N2U9 271 aa11.63□□□□□ -0.55
SHMT2-214ENST00000554604 GRHL3Q8TE85 626 aa11.63□□□□□ -0.55
SHMT2-214ENST00000554604 CREB3L4Q8TEY5 395 aa11.63□□□□□ -0.55
SHMT2-214ENST00000554604 SELENOMQ8WWX9 145 aa11.63□□□□□ -0.55
SHMT2-214ENST00000554604 HAS2Q92819 552 aa11.63□□□□□ -0.55
SHMT2-214ENST00000554604 TSLPQ969D9 159 aa11.63□□□□□ -0.55
SHMT2-214ENST00000554604 GAL3ST3Q96A11 431 aa11.63□□□□□ -0.55
SHMT2-214ENST00000554604 PTCHD1Q96NR3 888 aa11.63□□□□□ -0.55
SHMT2-214ENST00000554604 ZBTB18Q99592 522 aa11.63□□□□□ -0.55
SHMT2-214ENST00000554604 ZNF184Q99676 751 aaPredicted RBP11.63□□□□□ -0.55
SHMT2-214ENST00000554604 EHD1Q9H4M9 534 aa11.63□□□□□ -0.55
SHMT2-214ENST00000554604 NT5DC2Q9H857 520 aa11.63□□□□□ -0.55
SHMT2-214ENST00000554604 NTNG1Q9Y2I2 539 aa11.63□□□□□ -0.55
SHMT2-214ENST00000554604 LRCH1Q9Y2L9 728 aa11.63□□□□□ -0.55
SHMT2-214ENST00000554604 PCDHA9Q9Y5H5 950 aa11.63□□□□□ -0.55
SHMT2-214ENST00000554604 A0A0G2JN53 185 aa11.62□□□□□ -0.55
SHMT2-214ENST00000554604 TCRBV3S1A0A5B6 114 aa11.62□□□□□ -0.55
SHMT2-214ENST00000554604 LRIT2A6NDA9 550 aa11.62□□□□□ -0.55
SHMT2-214ENST00000554604 SEC22BO75396 215 aa11.62□□□□□ -0.55
SHMT2-214ENST00000554604 CLEC3AO75596 197 aa11.62□□□□□ -0.55
SHMT2-214ENST00000554604 WDPCPO95876 746 aa11.62□□□□□ -0.55
SHMT2-214ENST00000554604 PDYNP01213 254 aa11.62□□□□□ -0.55
SHMT2-214ENST00000554604 RPSAP08865 295 aaKnown RBP11.62□□□□□ -0.55
SHMT2-214ENST00000554604 SMIM10L1P0DMW3 83 aa11.62□□□□□ -0.55
SHMT2-214ENST00000554604 PRPS2P11908 318 aa11.62□□□□□ -0.55
SHMT2-214ENST00000554604 SLC6A2P23975 617 aa11.62□□□□□ -0.55
SHMT2-214ENST00000554604 MAPK1P28482 360 aa11.62□□□□□ -0.55
SHMT2-214ENST00000554604 EEFSECP57772 596 aaKnown RBP11.62□□□□□ -0.55
SHMT2-214ENST00000554604 TAS2R50P59544 299 aa11.62□□□□□ -0.55
SHMT2-214ENST00000554604 MRPS22P82650 360 aaKnown RBP11.62□□□□□ -0.55
SHMT2-214ENST00000554604 IRF8Q02556 426 aa11.62□□□□□ -0.55
SHMT2-214ENST00000554604 LAPTM5Q13571 262 aa11.62□□□□□ -0.55
SHMT2-214ENST00000554604 DOC2AQ14183 400 aa11.62□□□□□ -0.55
SHMT2-214ENST00000554604 E2F2Q14209 437 aa11.62□□□□□ -0.55
SHMT2-214ENST00000554604 KIAA0040Q15053 153 aa11.62□□□□□ -0.55
SHMT2-214ENST00000554604 CPSF6Q16630 551 aaKnown RBP eCLIP11.62□□□□□ -0.55
SHMT2-214ENST00000554604 C6orf10Q5SRN2 563 aa11.62□□□□□ -0.55
SHMT2-214ENST00000554604 TRIM40Q6P9F5 258 aa11.62□□□□□ -0.55
SHMT2-214ENST00000554604 QSOX2Q6ZRP7 698 aa11.62□□□□□ -0.55
SHMT2-214ENST00000554604 GOLM1Q8NBJ4 401 aa11.62□□□□□ -0.55
SHMT2-214ENST00000554604 FAM156AQ8NDB6 213 aa11.62□□□□□ -0.55
SHMT2-214ENST00000554604 M1APQ8TC57 530 aa11.62□□□□□ -0.55
SHMT2-214ENST00000554604 TMEM125Q96AQ2 219 aa11.62□□□□□ -0.55
SHMT2-214ENST00000554604 CMTM7Q96FZ5 175 aa11.62□□□□□ -0.55
SHMT2-214ENST00000554604 SMIM10Q96HG1 83 aa11.62□□□□□ -0.55
SHMT2-214ENST00000554604 ZNF354BQ96LW1 612 aa11.62□□□□□ -0.55
SHMT2-214ENST00000554604 HBEGFQ99075 208 aa11.62□□□□□ -0.55
SHMT2-214ENST00000554604 ECSITQ9BQ95 431 aa11.62□□□□□ -0.55
SHMT2-214ENST00000554604 SLC39A3Q9BRY0 314 aa11.62□□□□□ -0.55
SHMT2-214ENST00000554604 EFCAB11Q9BUY7 163 aa11.62□□□□□ -0.55
SHMT2-214ENST00000554604 ACPTQ9BZG2 426 aa11.62□□□□□ -0.55
SHMT2-214ENST00000554604 TRIM15Q9C019 465 aa11.62□□□□□ -0.55
SHMT2-214ENST00000554604 RNF32Q9H0A6 362 aa11.62□□□□□ -0.55
SHMT2-214ENST00000554604 ELOVL6Q9H5J4 265 aa11.62□□□□□ -0.55
SHMT2-214ENST00000554604 FARSBQ9NSD9 589 aaKnown RBP11.62□□□□□ -0.55
SHMT2-214ENST00000554604 CMTM6Q9NX76 183 aa11.62□□□□□ -0.55
SHMT2-214ENST00000554604 ABI3Q9P2A4 366 aa11.62□□□□□ -0.55
SHMT2-214ENST00000554604 TMED5Q9Y3A6 229 aa11.62□□□□□ -0.55
SHMT2-214ENST00000554604 CENPEQ02224 2701 aa11.62□□□□□ -0.55
SHMT2-214ENST00000554604 DOPEY1Q5JWR5 2465 aa11.62□□□□□ -0.55
SHMT2-214ENST00000554604 BLACEA4D250 179 aa11.61□□□□□ -0.55
SHMT2-214ENST00000554604 OR5H15A6NDH6 313 aa11.61□□□□□ -0.55
SHMT2-214ENST00000554604 AQP12BA6NM10 295 aa11.61□□□□□ -0.55
SHMT2-214ENST00000554604 C4orf51C9J302 202 aa11.61□□□□□ -0.55
SHMT2-214ENST00000554604 C9JVG2 144 aa11.61□□□□□ -0.55
SHMT2-214ENST00000554604 FAM227AF5H4B4 570 aa11.61□□□□□ -0.55
SHMT2-214ENST00000554604 B3GALT2O43825 422 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms