RNA–Protein interactions for RNA: ENST00000554453.5

ABCD4-221, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 5

Gene ABCD4, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-221ENST00000554453 DLX3O60479 287 aa10.22□□□□□ -0.77
ABCD4-221ENST00000554453 WDR1O75083 606 aa10.22□□□□□ -0.77
ABCD4-221ENST00000554453 TRIM3O75382 744 aaPredicted RBP10.22□□□□□ -0.77
ABCD4-221ENST00000554453 CELA3AP09093 270 aa10.22□□□□□ -0.77
ABCD4-221ENST00000554453 CT62P0C5K7 136 aa10.22□□□□□ -0.77
ABCD4-221ENST00000554453 NAGAP17050 411 aa10.22□□□□□ -0.77
ABCD4-221ENST00000554453 IGFBP2P18065 325 aa10.22□□□□□ -0.77
ABCD4-221ENST00000554453 TAC1P20366 129 aa10.22□□□□□ -0.77
ABCD4-221ENST00000554453 CAPN3P20807 821 aa10.22□□□□□ -0.77
ABCD4-221ENST00000554453 IMPDH1P20839 514 aa10.22□□□□□ -0.77
ABCD4-221ENST00000554453 ELAVL4P26378 380 aaKnown RBP10.22□□□□□ -0.77
ABCD4-221ENST00000554453 DEKP35659 375 aaKnown RBP10.22□□□□□ -0.77
ABCD4-221ENST00000554453 MAPK12P53778 367 aa10.22□□□□□ -0.77
ABCD4-221ENST00000554453 MGAT2Q10469 447 aa10.22□□□□□ -0.77
ABCD4-221ENST00000554453 GALNT1Q10472 559 aaPredicted RBP10.22□□□□□ -0.77
ABCD4-221ENST00000554453 TBCELQ5QJ74 424 aa10.22□□□□□ -0.77
ABCD4-221ENST00000554453 TEX35Q5T0J7 233 aa10.22□□□□□ -0.77
ABCD4-221ENST00000554453 HLA-DQA1Q5Y7H0 255 aa10.22□□□□□ -0.77
ABCD4-221ENST00000554453 TMEM198Q66K66 360 aa10.22□□□□□ -0.77
ABCD4-221ENST00000554453 RTL6Q6ICC9 239 aa10.22□□□□□ -0.77
ABCD4-221ENST00000554453 SLC48A1Q6P1K1 146 aa10.22□□□□□ -0.77
ABCD4-221ENST00000554453 ZNF585AQ6P3V2 769 aa10.22□□□□□ -0.77
ABCD4-221ENST00000554453 MEX3BQ6ZN04 569 aaKnown RBP10.22□□□□□ -0.77
ABCD4-221ENST00000554453 COMMD6Q7Z4G1 85 aa10.22□□□□□ -0.77
ABCD4-221ENST00000554453 CCDC71Q8IV32 467 aaPredicted RBP10.22□□□□□ -0.77
ABCD4-221ENST00000554453 GALNT12Q8IXK2 581 aa10.22□□□□□ -0.77
ABCD4-221ENST00000554453 CNPY4Q8N129 248 aa10.22□□□□□ -0.77
ABCD4-221ENST00000554453 CEP112Q8N8E3 955 aa10.22□□□□□ -0.77
ABCD4-221ENST00000554453 FAM13CQ8NE31 585 aa10.22□□□□□ -0.77
ABCD4-221ENST00000554453 OR5M9Q8NGP3 310 aa10.22□□□□□ -0.77
ABCD4-221ENST00000554453 OR5M3Q8NGP4 307 aa10.22□□□□□ -0.77
ABCD4-221ENST00000554453 KIF18AQ8NI77 898 aa10.22□□□□□ -0.77
ABCD4-221ENST00000554453 CHTF18Q8WVB6 975 aa10.22□□□□□ -0.77
ABCD4-221ENST00000554453 NTNG2Q96CW9 530 aa10.22□□□□□ -0.77
ABCD4-221ENST00000554453 GAL3ST4Q96RP7 486 aa10.22□□□□□ -0.77
ABCD4-221ENST00000554453 SECISBP2Q96T21 854 aaKnown RBP10.22□□□□□ -0.77
ABCD4-221ENST00000554453 UCK2Q9BZX2 261 aa10.22□□□□□ -0.77
ABCD4-221ENST00000554453 KCNJ16Q9NPI9 418 aa10.22□□□□□ -0.77
ABCD4-221ENST00000554453 TRPS1Q9UHF7 1281 aa10.22□□□□□ -0.77
ABCD4-221ENST00000554453 ZNF639Q9UID6 485 aa10.22□□□□□ -0.77
ABCD4-221ENST00000554453 PCDHGB3Q9Y5G1 929 aa10.22□□□□□ -0.77
ABCD4-221ENST00000554453 TEP1Q99973 2627 aaKnown RBP10.22□□□□□ -0.77
ABCD4-221ENST00000554453 PCNX3Q9H6A9 2034 aa10.21□□□□□ -0.77
ABCD4-221ENST00000554453 NUP214P35658 2090 aaPredicted RBP10.21□□□□□ -0.77
ABCD4-221ENST00000554453 LRRC3CA6NJW4 275 aa10.21□□□□□ -0.77
ABCD4-221ENST00000554453 MANBAO00462 879 aa10.21□□□□□ -0.77
ABCD4-221ENST00000554453 RIPK2O43353 540 aa10.21□□□□□ -0.77
ABCD4-221ENST00000554453 SUPT7LO94864 414 aa10.21□□□□□ -0.77
ABCD4-221ENST00000554453 OR4F21O95013 312 aa10.21□□□□□ -0.77
ABCD4-221ENST00000554453 SNX4O95219 450 aa10.21□□□□□ -0.77
ABCD4-221ENST00000554453 KRT6AP02538 564 aa10.21□□□□□ -0.77
ABCD4-221ENST00000554453 KRT6BP04259 564 aa10.21□□□□□ -0.77
ABCD4-221ENST00000554453 GLI4P10075 376 aa10.21□□□□□ -0.77
ABCD4-221ENST00000554453 HSD3B1P14060 373 aa10.21□□□□□ -0.77
ABCD4-221ENST00000554453 GABRA1P14867 456 aa10.21□□□□□ -0.77
ABCD4-221ENST00000554453 TSPAN8P19075 237 aa10.21□□□□□ -0.77
ABCD4-221ENST00000554453 CSNK2A2P19784 350 aaPredicted RBP10.21□□□□□ -0.77
ABCD4-221ENST00000554453 NT5EP21589 574 aa10.21□□□□□ -0.77
ABCD4-221ENST00000554453 ATP5F1P24539 256 aaPredicted RBP10.21□□□□□ -0.77
ABCD4-221ENST00000554453 HSD3B2P26439 372 aa10.21□□□□□ -0.77
ABCD4-221ENST00000554453 SOX18P35713 384 aa10.21□□□□□ -0.77
ABCD4-221ENST00000554453 ZFP36L2P47974 494 aaKnown RBP10.21□□□□□ -0.77
ABCD4-221ENST00000554453 KRT6CP48668 564 aa10.21□□□□□ -0.77
ABCD4-221ENST00000554453 KCNJ2P63252 427 aa10.21□□□□□ -0.77
ABCD4-221ENST00000554453 TFF3Q07654 80 aa10.21□□□□□ -0.77
ABCD4-221ENST00000554453 PRICKLE4Q2TBC4 344 aa10.21□□□□□ -0.77
ABCD4-221ENST00000554453 ZNF678Q5SXM1 525 aa10.21□□□□□ -0.77
ABCD4-221ENST00000554453 WLSQ5T9L3 541 aa10.21□□□□□ -0.77
ABCD4-221ENST00000554453 PRAMEF20Q5VT98 475 aa10.21□□□□□ -0.77
ABCD4-221ENST00000554453 FAM111BQ6SJ93 734 aa10.21□□□□□ -0.77
ABCD4-221ENST00000554453 TMEM64Q6YI46 380 aa10.21□□□□□ -0.77
ABCD4-221ENST00000554453 B3GNT6Q6ZMB0 384 aa10.21□□□□□ -0.77
ABCD4-221ENST00000554453 OR10Q1Q8NGQ4 319 aa10.21□□□□□ -0.77
ABCD4-221ENST00000554453 NEIL3Q8TAT5 605 aa10.21□□□□□ -0.77
ABCD4-221ENST00000554453 SPPL2AQ8TCT8 520 aa10.21□□□□□ -0.77
ABCD4-221ENST00000554453 ACMSDQ8TDX5 336 aa10.21□□□□□ -0.77
ABCD4-221ENST00000554453 DIO2Q92813 273 aa10.21□□□□□ -0.77
ABCD4-221ENST00000554453 CTHRC1Q96CG8 243 aa10.21□□□□□ -0.77
ABCD4-221ENST00000554453 DOHHQ9BU89 302 aa10.21□□□□□ -0.77
ABCD4-221ENST00000554453 ANGPTL4Q9BY76 406 aa10.21□□□□□ -0.77
ABCD4-221ENST00000554453 TXLNGYQ9BZA5 131 aa10.21□□□□□ -0.77
ABCD4-221ENST00000554453 EXO5Q9H790 373 aa10.21□□□□□ -0.77
ABCD4-221ENST00000554453 VPS29Q9UBQ0 182 aa10.21□□□□□ -0.77
ABCD4-221ENST00000554453 FETUBQ9UGM5 382 aa10.21□□□□□ -0.77
ABCD4-221ENST00000554453 CFL2Q9Y281 166 aa10.21□□□□□ -0.77
ABCD4-221ENST00000554453 FAM215AQ9Y5M1 114 aa10.21□□□□□ -0.77
ABCD4-221ENST00000554453 SERTM1A2A2V5 107 aa10.2□□□□□ -0.78
ABCD4-221ENST00000554453 GOLGA6L10A6NI86 522 aa10.2□□□□□ -0.78
ABCD4-221ENST00000554453 FOXO6A8MYZ6 492 aa10.2□□□□□ -0.78
ABCD4-221ENST00000554453 AHRRA9YTQ3 701 aa10.2□□□□□ -0.78
ABCD4-221ENST00000554453 ULK1O75385 1050 aa10.2□□□□□ -0.78
ABCD4-221ENST00000554453 ERAL1O75616 437 aaKnown RBP10.2□□□□□ -0.78
ABCD4-221ENST00000554453 ATP1B1P05026 303 aa10.2□□□□□ -0.78
ABCD4-221ENST00000554453 ABCB1P08183 1280 aaPredicted RBP10.2□□□□□ -0.78
ABCD4-221ENST00000554453 GSTA1P08263 222 aa10.2□□□□□ -0.78
ABCD4-221ENST00000554453 ENDOUP21128 410 aaKnown RBP10.2□□□□□ -0.78
ABCD4-221ENST00000554453 FEN1P39748 380 aaKnown RBP10.2□□□□□ -0.78
ABCD4-221ENST00000554453 CASP3P42574 277 aa10.2□□□□□ -0.78
ABCD4-221ENST00000554453 TMED10P49755 219 aaKnown RBP10.2□□□□□ -0.78
ABCD4-221ENST00000554453 PRKAA2P54646 552 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms