RNA–Protein interactions for RNA: ENST00000554390.5

PPP4R3A-202, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 1 (best)

Gene PPP4R3A, Length 2,953 nt, Biotype non stop decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-202ENST00000554390 MED28Q9H204 178 aa16.05■□□□□ 0.16
PPP4R3A-202ENST00000554390 SUV39H2Q9H5I1 410 aa16.05■□□□□ 0.16
PPP4R3A-202ENST00000554390 ZNF222Q9UK12 451 aa16.05■□□□□ 0.16
PPP4R3A-202ENST00000554390 SCML1Q9UN30 329 aa16.05■□□□□ 0.16
PPP4R3A-202ENST00000554390 CORO2BQ9UQ03 480 aa16.05■□□□□ 0.16
PPP4R3A-202ENST00000554390 CCL26Q9Y258 94 aa16.05■□□□□ 0.16
PPP4R3A-202ENST00000554390 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.05■□□□□ 0.16
PPP4R3A-202ENST00000554390 RPS10-NUDT3A0A1W2PQS6 291 aa16.05■□□□□ 0.16
PPP4R3A-202ENST00000554390 H3BUI4 141 aa16.05■□□□□ 0.16
PPP4R3A-202ENST00000554390 H7C4K7 107 aa16.05■□□□□ 0.16
PPP4R3A-202ENST00000554390 QSOX1O00391 747 aa16.05■□□□□ 0.16
PPP4R3A-202ENST00000554390 MTRF1O75570 445 aaKnown RBP16.05■□□□□ 0.16
PPP4R3A-202ENST00000554390 OPRD1P41143 372 aa16.05■□□□□ 0.16
PPP4R3A-202ENST00000554390 RBBP4Q09028 425 aa16.05■□□□□ 0.16
PPP4R3A-202ENST00000554390 KCNC3Q14003 757 aa16.05■□□□□ 0.16
PPP4R3A-202ENST00000554390 SNAPC1Q16533 368 aa16.05■□□□□ 0.16
PPP4R3A-202ENST00000554390 MPPE1Q53F39 396 aa16.05■□□□□ 0.16
PPP4R3A-202ENST00000554390 ASTLQ6HA08 431 aaPredicted RBP16.05■□□□□ 0.16
PPP4R3A-202ENST00000554390 LRRC17Q8N6Y2 441 aa16.05■□□□□ 0.16
PPP4R3A-202ENST00000554390 OR6C4Q8NGE1 309 aa16.05■□□□□ 0.16
PPP4R3A-202ENST00000554390 TMEM163Q8TC26 289 aa16.05■□□□□ 0.16
PPP4R3A-202ENST00000554390 CYB5D2Q8WUJ1 264 aa16.05■□□□□ 0.16
PPP4R3A-202ENST00000554390 CREB3L1Q96BA8 519 aa16.05■□□□□ 0.16
PPP4R3A-202ENST00000554390 MED18Q9BUE0 208 aa16.05■□□□□ 0.16
PPP4R3A-202ENST00000554390 PRMT3O60678 531 aa16.05■□□□□ 0.16
PPP4R3A-202ENST00000554390 IKZF1Q13422 519 aa16.05■□□□□ 0.16
PPP4R3A-202ENST00000554390 GPR33Q49SQ1 333 aa16.05■□□□□ 0.16
PPP4R3A-202ENST00000554390 GGTA1PQ4G0N0 100 aa16.05■□□□□ 0.16
PPP4R3A-202ENST00000554390 SHFQ7M4L6 423 aa16.05■□□□□ 0.16
PPP4R3A-202ENST00000554390 LAPTM4BQ86VI4 370 aa16.05■□□□□ 0.16
PPP4R3A-202ENST00000554390 TCEANCQ8N8B7 351 aa16.05■□□□□ 0.16
PPP4R3A-202ENST00000554390 ZFP41Q8N8Y5 198 aa16.05■□□□□ 0.16
PPP4R3A-202ENST00000554390 SCRN2Q96FV2 425 aa16.05■□□□□ 0.16
PPP4R3A-202ENST00000554390 IL17FQ96PD4 163 aa16.05■□□□□ 0.16
PPP4R3A-202ENST00000554390 RIOK2Q9BVS4 552 aaKnown RBP16.05■□□□□ 0.16
PPP4R3A-202ENST00000554390 MANSC4A6NHS7 340 aaPredicted RBP16.04■□□□□ 0.16
PPP4R3A-202ENST00000554390 SERPINI2O75830 405 aa16.04■□□□□ 0.16
PPP4R3A-202ENST00000554390 KLK1P06870 262 aa16.04■□□□□ 0.16
PPP4R3A-202ENST00000554390 HOXD4P09016 255 aaPredicted RBP16.04■□□□□ 0.16
PPP4R3A-202ENST00000554390 ZNF8P17098 575 aaPredicted RBP16.04■□□□□ 0.16
PPP4R3A-202ENST00000554390 PPIBP23284 216 aaKnown RBP16.04■□□□□ 0.16
PPP4R3A-202ENST00000554390 AVPR1BP47901 424 aa16.04■□□□□ 0.16
PPP4R3A-202ENST00000554390 CCT3P49368 545 aaKnown RBP16.04■□□□□ 0.16
PPP4R3A-202ENST00000554390 EVX1P49640 407 aa16.04■□□□□ 0.16
PPP4R3A-202ENST00000554390 CTBP2P56545 445 aa16.04■□□□□ 0.16
PPP4R3A-202ENST00000554390 TAS2R50P59544 299 aa16.04■□□□□ 0.16
PPP4R3A-202ENST00000554390 CTAG1AP78358 180 aa16.04■□□□□ 0.16
PPP4R3A-202ENST00000554390 RPA4Q13156 261 aa16.04■□□□□ 0.16
PPP4R3A-202ENST00000554390 EXOSC2Q13868 293 aaKnown RBP16.04■□□□□ 0.16
PPP4R3A-202ENST00000554390 SYTL3Q4VX76 610 aa16.04■□□□□ 0.16
PPP4R3A-202ENST00000554390 GPR139Q6DWJ6 353 aa16.04■□□□□ 0.16
PPP4R3A-202ENST00000554390 RANBP3Q9H6Z4 567 aaPredicted RBP16.04■□□□□ 0.16
PPP4R3A-202ENST00000554390 FOLH1BQ9HBA9 442 aa16.04■□□□□ 0.16
PPP4R3A-202ENST00000554390 STOX2Q9P2F5 926 aaPredicted RBP16.04■□□□□ 0.16
PPP4R3A-202ENST00000554390 A0A1W2PRU2 124 aa16.04■□□□□ 0.16
PPP4R3A-202ENST00000554390 TRBC2A0A5B9 178 aa16.04■□□□□ 0.16
PPP4R3A-202ENST00000554390 CASKO14936 926 aa16.04■□□□□ 0.16
PPP4R3A-202ENST00000554390 ETV5P41161 510 aa16.04■□□□□ 0.16
PPP4R3A-202ENST00000554390 ETV1P50549 477 aa16.04■□□□□ 0.16
PPP4R3A-202ENST00000554390 C2orf80Q0P641 193 aa16.04■□□□□ 0.16
PPP4R3A-202ENST00000554390 KLHL12Q53G59 568 aa16.04■□□□□ 0.16
PPP4R3A-202ENST00000554390 TMEM201Q5SNT2 666 aa16.04■□□□□ 0.16
PPP4R3A-202ENST00000554390 BCL2L15Q5TBC7 163 aa16.04■□□□□ 0.16
PPP4R3A-202ENST00000554390 GARNL3Q5VVW2 1013 aa16.04■□□□□ 0.16
PPP4R3A-202ENST00000554390 ARSKQ6UWY0 536 aa16.04■□□□□ 0.16
PPP4R3A-202ENST00000554390 GPALPP1Q8IXQ4 340 aa16.04■□□□□ 0.16
PPP4R3A-202ENST00000554390 LSM14AQ8ND56 463 aaKnown RBP16.04■□□□□ 0.16
PPP4R3A-202ENST00000554390 ZNF461Q8TAF7 563 aa16.04■□□□□ 0.16
PPP4R3A-202ENST00000554390 GEMIN6Q8WXD5 167 aaKnown RBP16.04■□□□□ 0.16
PPP4R3A-202ENST00000554390 UCN3Q969E3 161 aa16.04■□□□□ 0.16
PPP4R3A-202ENST00000554390 SORCS2Q96PQ0 1159 aa16.04■□□□□ 0.16
PPP4R3A-202ENST00000554390 MRPL39Q9NYK5 338 aaKnown RBP16.04■□□□□ 0.16
PPP4R3A-202ENST00000554390 RUVBL1Q9Y265 456 aaKnown RBP16.04■□□□□ 0.16
PPP4R3A-202ENST00000554390 DSPPQ9NZW4 1301 aa16.03■□□□□ 0.16
PPP4R3A-202ENST00000554390 HEPACAM2A8MVW5 462 aa16.03■□□□□ 0.16
PPP4R3A-202ENST00000554390 SGTAO43765 313 aa16.03■□□□□ 0.16
PPP4R3A-202ENST00000554390 GSTM5P46439 218 aa16.03■□□□□ 0.16
PPP4R3A-202ENST00000554390 SPINT3P49223 89 aa16.03■□□□□ 0.16
PPP4R3A-202ENST00000554390 METAP1P53582 386 aa16.03■□□□□ 0.16
PPP4R3A-202ENST00000554390 PLK5Q496M5 336 aa16.03■□□□□ 0.16
PPP4R3A-202ENST00000554390 OR2G6Q5TZ20 316 aa16.03■□□□□ 0.16
PPP4R3A-202ENST00000554390 ZNF770Q6IQ21 691 aaPredicted RBP16.03■□□□□ 0.16
PPP4R3A-202ENST00000554390 SLC8B1Q6J4K2 584 aa16.03■□□□□ 0.16
PPP4R3A-202ENST00000554390 CASP12Q6UXS9 341 aa16.03■□□□□ 0.16
PPP4R3A-202ENST00000554390 CEACAM20Q6UY09 585 aa16.03■□□□□ 0.16
PPP4R3A-202ENST00000554390 RNF180Q86T96 592 aa16.03■□□□□ 0.16
PPP4R3A-202ENST00000554390 ZNF655Q8N720 491 aaPredicted RBP16.03■□□□□ 0.16
PPP4R3A-202ENST00000554390 OR11H7Q8NGC8 314 aa16.03■□□□□ 0.16
PPP4R3A-202ENST00000554390 PRR14Q9BWN1 585 aa16.03■□□□□ 0.16
PPP4R3A-202ENST00000554390 NPIPB8E9PQR5 432 aa16.03■□□□□ 0.16
PPP4R3A-202ENST00000554390 SGK494L7N484 410 aa16.03■□□□□ 0.16
PPP4R3A-202ENST00000554390 SH3BP5O60239 455 aa16.03■□□□□ 0.16
PPP4R3A-202ENST00000554390 LZTS3O60299 673 aaPredicted RBP16.03■□□□□ 0.16
PPP4R3A-202ENST00000554390 CLCNKAP51800 687 aa16.03■□□□□ 0.16
PPP4R3A-202ENST00000554390 LIM2P55344 173 aa16.03■□□□□ 0.16
PPP4R3A-202ENST00000554390 SEC23BQ15437 767 aa16.03■□□□□ 0.16
PPP4R3A-202ENST00000554390 COL28A1Q2UY09 1125 aa16.03■□□□□ 0.16
PPP4R3A-202ENST00000554390 SPDYE7PQ495Y7 208 aa16.03■□□□□ 0.16
PPP4R3A-202ENST00000554390 BICRALQ6AI39 1079 aa16.03■□□□□ 0.16
PPP4R3A-202ENST00000554390 METAP1DQ6UB28 335 aaPredicted RBP16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms