RNA–Protein interactions for RNA: ENST00000554310.5

SHMT2-211, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-211ENST00000554310 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.1□□□□□ -0.47
SHMT2-211ENST00000554310 NUDCD3Q8IVD9 361 aa12.1□□□□□ -0.47
SHMT2-211ENST00000554310 SIAH3Q8IW03 269 aa12.1□□□□□ -0.47
SHMT2-211ENST00000554310 CPSF7Q8N684 471 aaKnown RBP12.1□□□□□ -0.47
SHMT2-211ENST00000554310 GOLM1Q8NBJ4 401 aa12.1□□□□□ -0.47
SHMT2-211ENST00000554310 PSD4Q8NDX1 1056 aa12.1□□□□□ -0.47
SHMT2-211ENST00000554310 SLC22A8Q8TCC7 542 aa12.1□□□□□ -0.47
SHMT2-211ENST00000554310 CHTF18Q8WVB6 975 aa12.1□□□□□ -0.47
SHMT2-211ENST00000554310 SGCZQ96LD1 299 aa12.1□□□□□ -0.47
SHMT2-211ENST00000554310 C7orf26Q96N11 449 aa12.1□□□□□ -0.47
SHMT2-211ENST00000554310 GPR137Q96N19 417 aa12.1□□□□□ -0.47
SHMT2-211ENST00000554310 KCNA7Q96RP8 456 aa12.1□□□□□ -0.47
SHMT2-211ENST00000554310 TRMOQ9BU70 441 aa12.1□□□□□ -0.47
SHMT2-211ENST00000554310 CXorf21Q9HAI6 301 aa12.1□□□□□ -0.47
SHMT2-211ENST00000554310 A0A1B0GUH1 482 aa12.09□□□□□ -0.47
SHMT2-211ENST00000554310 WIPF3A6NGB9 483 aa12.09□□□□□ -0.47
SHMT2-211ENST00000554310 WASHC1A8K0Z3 465 aa12.09□□□□□ -0.47
SHMT2-211ENST00000554310 HRKO00198 91 aa12.09□□□□□ -0.47
SHMT2-211ENST00000554310 PEX1O43933 1283 aa12.09□□□□□ -0.47
SHMT2-211ENST00000554310 PCDH7O60245 1069 aa12.09□□□□□ -0.47
SHMT2-211ENST00000554310 ATP1B1P05026 303 aa12.09□□□□□ -0.47
SHMT2-211ENST00000554310 PORP16435 677 aaPredicted RBP12.09□□□□□ -0.47
SHMT2-211ENST00000554310 TIA1P31483 386 aaKnown RBP eCLIP12.09□□□□□ -0.47
SHMT2-211ENST00000554310 GSTM5P46439 218 aa12.09□□□□□ -0.47
SHMT2-211ENST00000554310 MEOX1P50221 254 aa12.09□□□□□ -0.47
SHMT2-211ENST00000554310 XKP51811 444 aa12.09□□□□□ -0.47
SHMT2-211ENST00000554310 FOXA1P55317 472 aa12.09□□□□□ -0.47
SHMT2-211ENST00000554310 SLC37A1P57057 533 aa12.09□□□□□ -0.47
SHMT2-211ENST00000554310 HMGCS1Q01581 520 aa12.09□□□□□ -0.47
SHMT2-211ENST00000554310 ASPHQ12797 758 aa12.09□□□□□ -0.47
SHMT2-211ENST00000554310 SF3A3Q12874 501 aaKnown RBP eCLIP12.09□□□□□ -0.471e-13■■■□□ 16.4
SHMT2-211ENST00000554310 BNIP1Q12981 228 aa12.09□□□□□ -0.47
SHMT2-211ENST00000554310 EBPQ15125 230 aaKnown RBP12.09□□□□□ -0.47
SHMT2-211ENST00000554310 MDGA2Q7Z553 956 aa12.09□□□□□ -0.47
SHMT2-211ENST00000554310 SULF2Q8IWU5 870 aa12.09□□□□□ -0.47
SHMT2-211ENST00000554310 HOMEZQ8IX15 550 aa12.09□□□□□ -0.47
SHMT2-211ENST00000554310 C10orf67Q8IYJ2 551 aa12.09□□□□□ -0.47
SHMT2-211ENST00000554310 DND1Q8IYX4 353 aaKnown RBP12.09□□□□□ -0.47
SHMT2-211ENST00000554310 SLC15A4Q8N697 577 aa12.09□□□□□ -0.47
SHMT2-211ENST00000554310 ZFP62Q8NB50 900 aaPredicted RBP12.09□□□□□ -0.47
SHMT2-211ENST00000554310 TM4SF18Q96CE8 201 aa12.09□□□□□ -0.47
SHMT2-211ENST00000554310 KLHL29Q96CT2 875 aa12.09□□□□□ -0.47
SHMT2-211ENST00000554310 WWTR1Q9GZV5 400 aa12.09□□□□□ -0.47
SHMT2-211ENST00000554310 LIN28AQ9H9Z2 209 aaKnown RBP12.09□□□□□ -0.47
SHMT2-211ENST00000554310 SIRT5Q9NXA8 310 aa12.09□□□□□ -0.47
SHMT2-211ENST00000554310 CES1P1Q9UKY3 287 aa12.09□□□□□ -0.47
SHMT2-211ENST00000554310 PSME2Q9UL46 239 aa12.09□□□□□ -0.47
SHMT2-211ENST00000554310 TIMM22Q9Y584 194 aa12.09□□□□□ -0.47
SHMT2-211ENST00000554310 GNG14A0A1W2PPG7 69 aa12.08□□□□□ -0.48
SHMT2-211ENST00000554310 A0A1W2PS29 197 aa12.08□□□□□ -0.48
SHMT2-211ENST00000554310 NPIPA5E9PKD4 350 aa12.08□□□□□ -0.48
SHMT2-211ENST00000554310 TFECO14948 347 aaPredicted RBP12.08□□□□□ -0.48
SHMT2-211ENST00000554310 LRRTM2O43300 516 aa12.08□□□□□ -0.48
SHMT2-211ENST00000554310 SNNO75324 88 aaPredicted RBP12.08□□□□□ -0.48
SHMT2-211ENST00000554310 UBOX5O94941 541 aa12.08□□□□□ -0.48
SHMT2-211ENST00000554310 RNF224P0DH78 156 aa12.08□□□□□ -0.48
SHMT2-211ENST00000554310 GP1BBP13224 206 aa12.08□□□□□ -0.48
SHMT2-211ENST00000554310 DRD2P14416 443 aa12.08□□□□□ -0.48
SHMT2-211ENST00000554310 NT5EP21589 574 aa12.08□□□□□ -0.48
SHMT2-211ENST00000554310 FUT7Q11130 342 aa12.08□□□□□ -0.48
SHMT2-211ENST00000554310 IMPG1Q17R60 797 aa12.08□□□□□ -0.48
SHMT2-211ENST00000554310 PIGGQ5H8A4 983 aa12.08□□□□□ -0.48
SHMT2-211ENST00000554310 IL20RBQ6UXL0 311 aa12.08□□□□□ -0.48
SHMT2-211ENST00000554310 BNC2Q6ZN30 1099 aaPredicted RBP12.08□□□□□ -0.48
SHMT2-211ENST00000554310 C10orf107Q8IVU9 208 aa12.08□□□□□ -0.48
SHMT2-211ENST00000554310 FITM2Q8N6M3 262 aa12.08□□□□□ -0.48
SHMT2-211ENST00000554310 SREK1Q8WXA9 508 aaKnown RBP12.08□□□□□ -0.48
SHMT2-211ENST00000554310 UCN3Q969E3 161 aa12.08□□□□□ -0.48
SHMT2-211ENST00000554310 C11orf24Q96F05 449 aaPredicted RBP12.08□□□□□ -0.48
SHMT2-211ENST00000554310 APIPQ96GX9 242 aa12.08□□□□□ -0.48
SHMT2-211ENST00000554310 MAGED4Q96JG8 741 aa12.08□□□□□ -0.48
SHMT2-211ENST00000554310 GAL3ST4Q96RP7 486 aa12.08□□□□□ -0.48
SHMT2-211ENST00000554310 SHCBP1LQ9BZQ2 653 aa12.08□□□□□ -0.48
SHMT2-211ENST00000554310 TSPAN10Q9H1Z9 355 aaPredicted RBP12.08□□□□□ -0.48
SHMT2-211ENST00000554310 RASSF4Q9H2L5 321 aa12.08□□□□□ -0.48
SHMT2-211ENST00000554310 NPIPA1Q9UND3 350 aa12.08□□□□□ -0.48
SHMT2-211ENST00000554310 CAPN7Q9Y6W3 813 aa12.08□□□□□ -0.48
SHMT2-211ENST00000554310 CENPEQ02224 2701 aa12.08□□□□□ -0.48
SHMT2-211ENST00000554310 ZNF354AO60765 605 aaPredicted RBP12.07□□□□□ -0.48
SHMT2-211ENST00000554310 SLC19A2O60779 497 aa12.07□□□□□ -0.48
SHMT2-211ENST00000554310 TRIM13O60858 407 aa12.07□□□□□ -0.48
SHMT2-211ENST00000554310 ERAL1O75616 437 aaKnown RBP12.07□□□□□ -0.48
SHMT2-211ENST00000554310 RSL1D1O76021 490 aaKnown RBP12.07□□□□□ -0.48
SHMT2-211ENST00000554310 NADKO95544 446 aaPredicted RBP12.07□□□□□ -0.48
SHMT2-211ENST00000554310 CLPSP04118 112 aa12.07□□□□□ -0.48
SHMT2-211ENST00000554310 IL3P08700 152 aa12.07□□□□□ -0.48
SHMT2-211ENST00000554310 UROSP10746 265 aa12.07□□□□□ -0.48
SHMT2-211ENST00000554310 CSNK2A2P19784 350 aaPredicted RBP12.07□□□□□ -0.48
SHMT2-211ENST00000554310 SSTR4P31391 388 aa12.07□□□□□ -0.48
SHMT2-211ENST00000554310 ALDH9A1P49189 494 aa12.07□□□□□ -0.48
SHMT2-211ENST00000554310 CASP6P55212 293 aa12.07□□□□□ -0.48
SHMT2-211ENST00000554310 GPR85P60893 370 aa12.07□□□□□ -0.48
SHMT2-211ENST00000554310 RAE1P78406 368 aaKnown RBP12.07□□□□□ -0.48
SHMT2-211ENST00000554310 OCRLQ01968 901 aa12.07□□□□□ -0.48
SHMT2-211ENST00000554310 SRSF11Q05519 484 aaKnown RBP12.07□□□□□ -0.48
SHMT2-211ENST00000554310 BST1Q10588 318 aa12.07□□□□□ -0.48
SHMT2-211ENST00000554310 HEPACAMQ14CZ8 416 aa12.07□□□□□ -0.48
SHMT2-211ENST00000554310 CHI3L2Q15782 390 aa12.07□□□□□ -0.48
SHMT2-211ENST00000554310 RNFT1Q5M7Z0 435 aa12.07□□□□□ -0.48
SHMT2-211ENST00000554310 GK5Q6ZS86 529 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms