RNA–Protein interactions for RNA: ENST00000554174.1

LRP1-207, Transcript of LDL receptor related protein 1, humanhuman

TSL 1 (best) BASIC

Gene LRP1, Length 2,175 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1-207ENST00000554174 CES1P1Q9UKY3 287 aa11.52□□□□□ -0.57
LRP1-207ENST00000554174 TMCC3Q9ULS5 477 aa11.52□□□□□ -0.57
LRP1-207ENST00000554174 B3GNT3Q9Y2A9 372 aa11.52□□□□□ -0.57
LRP1-207ENST00000554174 PCDHGA4Q9Y5G9 962 aa11.52□□□□□ -0.57
LRP1-207ENST00000554174 TRBV23OR9-2A0A075B6M9 112 aa11.51□□□□□ -0.57
LRP1-207ENST00000554174 ISM1B1AKI9 464 aa11.51□□□□□ -0.57
LRP1-207ENST00000554174 ENTPD6O75354 484 aa11.51□□□□□ -0.57
LRP1-207ENST00000554174 SERPINB7O75635 380 aa11.51□□□□□ -0.57
LRP1-207ENST00000554174 TP53P04637 393 aaPredicted RBP11.51□□□□□ -0.57
LRP1-207ENST00000554174 HSMCR30P0CW71 290 aa11.51□□□□□ -0.57
LRP1-207ENST00000554174 DDX5P17844 614 aaKnown RBP11.51□□□□□ -0.57
LRP1-207ENST00000554174 NTSR1P30989 418 aa11.51□□□□□ -0.57
LRP1-207ENST00000554174 NTSP30990 170 aa11.51□□□□□ -0.57
LRP1-207ENST00000554174 TNFRSF4P43489 277 aa11.51□□□□□ -0.57
LRP1-207ENST00000554174 CLK1P49759 484 aaKnown RBP11.51□□□□□ -0.57
LRP1-207ENST00000554174 DLX2Q07687 328 aaPredicted RBP11.51□□□□□ -0.57
LRP1-207ENST00000554174 INAQ16352 499 aa11.51□□□□□ -0.57
LRP1-207ENST00000554174 RGS21Q2M5E4 152 aa11.51□□□□□ -0.57
LRP1-207ENST00000554174 TBC1D25Q3MII6 688 aa11.51□□□□□ -0.57
LRP1-207ENST00000554174 ARMCX4Q5H9R4 360 aa11.51□□□□□ -0.57
LRP1-207ENST00000554174 ZNF425Q6IV72 752 aa11.51□□□□□ -0.57
LRP1-207ENST00000554174 PODNL1Q6PEZ8 512 aa11.51□□□□□ -0.57
LRP1-207ENST00000554174 RD3Q7Z3Z2 195 aa11.51□□□□□ -0.57
LRP1-207ENST00000554174 KCT2Q8NC54 265 aa11.51□□□□□ -0.57
LRP1-207ENST00000554174 OR6T1Q8NGN1 323 aa11.51□□□□□ -0.57
LRP1-207ENST00000554174 OR1E3Q8WZA6 343 aa11.51□□□□□ -0.57
LRP1-207ENST00000554174 SCARF2Q96GP6 870 aaPredicted RBP11.51□□□□□ -0.57
LRP1-207ENST00000554174 PRR14Q9BWN1 585 aa11.51□□□□□ -0.57
LRP1-207ENST00000554174 MAN2C1Q9NTJ4 1040 aa11.51□□□□□ -0.57
LRP1-207ENST00000554174 LOC100506127A0A0U1RQW1 187 aa11.51□□□□□ -0.57
LRP1-207ENST00000554174 CACNB4O00305 520 aaPredicted RBP11.51□□□□□ -0.57
LRP1-207ENST00000554174 BTN3A3O00478 584 aa11.51□□□□□ -0.57
LRP1-207ENST00000554174 FAAHO00519 579 aa11.51□□□□□ -0.57
LRP1-207ENST00000554174 ZW10O43264 779 aa11.51□□□□□ -0.57
LRP1-207ENST00000554174 EGFP01133 1207 aa11.51□□□□□ -0.57
LRP1-207ENST00000554174 AHRP35869 848 aa11.51□□□□□ -0.57
LRP1-207ENST00000554174 SLC15A1P46059 708 aa11.51□□□□□ -0.57
LRP1-207ENST00000554174 RGS6P49758 472 aa11.51□□□□□ -0.57
LRP1-207ENST00000554174 TARDBPQ13148 414 aaKnown RBP eCLIP11.51□□□□□ -0.57
LRP1-207ENST00000554174 ILKQ13418 452 aa11.51□□□□□ -0.57
LRP1-207ENST00000554174 TMEM31Q5JXX7 168 aa11.51□□□□□ -0.57
LRP1-207ENST00000554174 PERM1Q5SV97 790 aa11.51□□□□□ -0.57
LRP1-207ENST00000554174 PPP2R2DQ66LE6 453 aa11.51□□□□□ -0.57
LRP1-207ENST00000554174 MEX3DQ86XN8 651 aaKnown RBP11.51□□□□□ -0.57
LRP1-207ENST00000554174 FAM46DQ8NEK8 389 aa11.51□□□□□ -0.57
LRP1-207ENST00000554174 ZG16BQ96DA0 208 aa11.51□□□□□ -0.57
LRP1-207ENST00000554174 CDCA3Q99618 268 aaPredicted RBP11.51□□□□□ -0.57
LRP1-207ENST00000554174 GPA33Q99795 319 aa11.51□□□□□ -0.57
LRP1-207ENST00000554174 GABRG3Q99928 467 aa11.51□□□□□ -0.57
LRP1-207ENST00000554174 CENPOQ9BU64 300 aa11.51□□□□□ -0.57
LRP1-207ENST00000554174 C6orf106Q9H6K1 298 aaPredicted RBP11.51□□□□□ -0.57
LRP1-207ENST00000554174 TBCCD1Q9NVR7 557 aa11.51□□□□□ -0.57
LRP1-207ENST00000554174 DNAJC27Q9NZQ0 273 aa11.51□□□□□ -0.57
LRP1-207ENST00000554174 DOLKQ9UPQ8 538 aa11.51□□□□□ -0.57
LRP1-207ENST00000554174 SCN2AQ99250 2005 aa11.5□□□□□ -0.57
LRP1-207ENST00000554174 PRUNE2Q8WUY3 3088 aa11.5□□□□□ -0.57
LRP1-207ENST00000554174 TMEM247A6NEH6 219 aa11.5□□□□□ -0.57
LRP1-207ENST00000554174 H3BN98 237 aa11.5□□□□□ -0.57
LRP1-207ENST00000554174 TLR4O00206 839 aa11.5□□□□□ -0.57
LRP1-207ENST00000554174 PROM1O43490 865 aa11.5□□□□□ -0.57
LRP1-207ENST00000554174 KLF8O95600 359 aaPredicted RBP11.5□□□□□ -0.57
LRP1-207ENST00000554174 NTN1O95631 604 aa11.5□□□□□ -0.57
LRP1-207ENST00000554174 ASGR2P07307 311 aa11.5□□□□□ -0.57
LRP1-207ENST00000554174 CHRM5P08912 532 aaPredicted RBP11.5□□□□□ -0.57
LRP1-207ENST00000554174 F3P13726 295 aa11.5□□□□□ -0.57
LRP1-207ENST00000554174 MC3RP41968 323 aa11.5□□□□□ -0.57
LRP1-207ENST00000554174 MAN2A2P49641 1150 aa11.5□□□□□ -0.57
LRP1-207ENST00000554174 LIMK1P53667 647 aa11.5□□□□□ -0.57
LRP1-207ENST00000554174 TFF2Q03403 129 aa11.5□□□□□ -0.57
LRP1-207ENST00000554174 LTB4RQ15722 352 aa11.5□□□□□ -0.57
LRP1-207ENST00000554174 ATAT1Q5SQI0 421 aa11.5□□□□□ -0.57
LRP1-207ENST00000554174 SLC48A1Q6P1K1 146 aa11.5□□□□□ -0.57
LRP1-207ENST00000554174 ENPP7Q6UWV6 458 aa11.5□□□□□ -0.57
LRP1-207ENST00000554174 TMEM184AQ6ZMB5 413 aa11.5□□□□□ -0.57
LRP1-207ENST00000554174 VN1R4Q7Z5H5 301 aa11.5□□□□□ -0.57
LRP1-207ENST00000554174 AMIGO1Q86WK6 493 aa11.5□□□□□ -0.57
LRP1-207ENST00000554174 SHISA5Q8N114 240 aa11.5□□□□□ -0.57
LRP1-207ENST00000554174 IQCF1Q8N6M8 205 aa11.5□□□□□ -0.57
LRP1-207ENST00000554174 MFSD9Q8NBP5 474 aa11.5□□□□□ -0.57
LRP1-207ENST00000554174 OR9A2Q8NGT5 310 aa11.5□□□□□ -0.57
LRP1-207ENST00000554174 RASSF5Q8WWW0 418 aa11.5□□□□□ -0.57
LRP1-207ENST00000554174 TSACCQ96A04 125 aaPredicted RBP11.5□□□□□ -0.57
LRP1-207ENST00000554174 SARGQ9BW04 601 aa11.5□□□□□ -0.57
LRP1-207ENST00000554174 CDCA4Q9BXL8 241 aa11.5□□□□□ -0.57
LRP1-207ENST00000554174 WDR12Q9GZL7 423 aaKnown RBP11.5□□□□□ -0.57
LRP1-207ENST00000554174 POLR2J3Q9H1A7 115 aaKnown RBP11.5□□□□□ -0.57
LRP1-207ENST00000554174 SLC25A19Q9HC21 320 aa11.5□□□□□ -0.57
LRP1-207ENST00000554174 EQTNQ9NQ60 294 aa11.5□□□□□ -0.57
LRP1-207ENST00000554174 CLN6Q9NWW5 311 aa11.5□□□□□ -0.57
LRP1-207ENST00000554174 ZNF624Q9P2J8 865 aaPredicted RBP11.5□□□□□ -0.57
LRP1-207ENST00000554174 ENOPH1Q9UHY7 261 aa11.5□□□□□ -0.57
LRP1-207ENST00000554174 MGAT4BQ9UQ53 548 aa11.5□□□□□ -0.57
LRP1-207ENST00000554174 IFT52Q9Y366 437 aa11.5□□□□□ -0.57
LRP1-207ENST00000554174 SH3D21A4FU49 640 aa11.5□□□□□ -0.57
LRP1-207ENST00000554174 DSCR3O14972 297 aa11.5□□□□□ -0.57
LRP1-207ENST00000554174 UGT2B17O75795 530 aa11.5□□□□□ -0.57
LRP1-207ENST00000554174 HNRNPCP07910 306 aaKnown RBP eCLIP11.5□□□□□ -0.57
LRP1-207ENST00000554174 HOXB2P14652 356 aa11.5□□□□□ -0.57
LRP1-207ENST00000554174 TNNI3P19429 210 aa11.5□□□□□ -0.57
LRP1-207ENST00000554174 PPP2R1BP30154 601 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms