RNA–Protein interactions for RNA: ENST00000553923.1

SRP54-204, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-204ENST00000553923 ERVK-19Q9WJR5 959 aa2.01□□□□□ -2.09
SRP54-204ENST00000553923 MRPS28Q9Y2Q9 187 aaKnown RBP2.01□□□□□ -2.09
SRP54-204ENST00000553923 OR10H1Q9Y4A9 318 aa2.01□□□□□ -2.09
SRP54-204ENST00000553923 ETV7Q9Y603 341 aa2.01□□□□□ -2.09
SRP54-204ENST00000553923 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP2□□□□□ -2.09
SRP54-204ENST00000553923 A0A1W2PP11 408 aa2□□□□□ -2.09
SRP54-204ENST00000553923 METTL21EPA6NDL7 271 aa2□□□□□ -2.09
SRP54-204ENST00000553923 BTBD17A6NE02 478 aa2□□□□□ -2.09
SRP54-204ENST00000553923 PCP4L1A6NKN8 68 aa2□□□□□ -2.09
SRP54-204ENST00000553923 H0YIV9 168 aa2□□□□□ -2.09
SRP54-204ENST00000553923 GOLGA8SH3BPF8 625 aa2□□□□□ -2.09
SRP54-204ENST00000553923 L7N2F9 121 aa2□□□□□ -2.09
SRP54-204ENST00000553923 CHEK1O14757 476 aa2□□□□□ -2.09
SRP54-204ENST00000553923 SYT7O43581 403 aa2□□□□□ -2.09
SRP54-204ENST00000553923 SNNO75324 88 aaPredicted RBP2□□□□□ -2.09
SRP54-204ENST00000553923 CLN5O75503 358 aa2□□□□□ -2.09
SRP54-204ENST00000553923 UFL1O94874 794 aa2□□□□□ -2.09
SRP54-204ENST00000553923 TSHBP01222 138 aa2□□□□□ -2.09
SRP54-204ENST00000553923 MT-ND1P03886 318 aa2□□□□□ -2.09
SRP54-204ENST00000553923 S100A9P06702 114 aaKnown RBP2□□□□□ -2.09
SRP54-204ENST00000553923 ANXA4P09525 319 aaPredicted RBP2□□□□□ -2.09
SRP54-204ENST00000553923 HIST1H2AGP0C0S8 130 aaPredicted RBP2□□□□□ -2.09
SRP54-204ENST00000553923 ODC1P11926 461 aa2□□□□□ -2.09
SRP54-204ENST00000553923 CCDC130P13994 396 aa2□□□□□ -2.09
SRP54-204ENST00000553923 DARSP14868 501 aaKnown RBP2□□□□□ -2.09
SRP54-204ENST00000553923 CYP11B1P15538 503 aa2□□□□□ -2.09
SRP54-204ENST00000553923 HNF1AP20823 631 aa2□□□□□ -2.09
SRP54-204ENST00000553923 PCMT1P22061 227 aa2□□□□□ -2.09
SRP54-204ENST00000553923 UQCRC2P22695 453 aa2□□□□□ -2.09
SRP54-204ENST00000553923 LHCGRP22888 699 aa2□□□□□ -2.09
SRP54-204ENST00000553923 NUP62P37198 522 aaPredicted RBP2□□□□□ -2.09
SRP54-204ENST00000553923 ANP32AP39687 249 aaKnown RBP2□□□□□ -2.09
SRP54-204ENST00000553923 ACADSBP45954 432 aa2□□□□□ -2.09
SRP54-204ENST00000553923 OR1G1P47890 313 aa2□□□□□ -2.09
SRP54-204ENST00000553923 ETV1P50549 477 aa2□□□□□ -2.09
SRP54-204ENST00000553923 SUCLG1P53597 346 aaKnown RBP2□□□□□ -2.09
SRP54-204ENST00000553923 CDH11P55287 796 aa2□□□□□ -2.09
SRP54-204ENST00000553923 RPP38P78345 283 aaKnown RBP2□□□□□ -2.09
SRP54-204ENST00000553923 FGL1Q08830 312 aa2□□□□□ -2.09
SRP54-204ENST00000553923 PJVKQ0ZLH3 352 aa2□□□□□ -2.09
SRP54-204ENST00000553923 TRAP1Q12931 704 aaKnown RBP2□□□□□ -2.09
SRP54-204ENST00000553923 SRSF5Q13243 272 aaKnown RBP2□□□□□ -2.09
SRP54-204ENST00000553923 EXOSC2Q13868 293 aaKnown RBP2□□□□□ -2.09
SRP54-204ENST00000553923 SQLEQ14534 574 aa2□□□□□ -2.09
SRP54-204ENST00000553923 OPCMLQ14982 345 aa2□□□□□ -2.09
SRP54-204ENST00000553923 TMEM132DQ14C87 1099 aa2□□□□□ -2.09
SRP54-204ENST00000553923 EXOSC7Q15024 291 aaKnown RBP2□□□□□ -2.09
SRP54-204ENST00000553923 SPHARQ15513 63 aa2□□□□□ -2.09
SRP54-204ENST00000553923 CAMK4Q16566 473 aa2□□□□□ -2.09
SRP54-204ENST00000553923 POM121L1PQ3SYA9 428 aa2□□□□□ -2.09
SRP54-204ENST00000553923 ZNF311Q5JNZ3 666 aa2□□□□□ -2.09
SRP54-204ENST00000553923 LIPJQ5W064 366 aa2□□□□□ -2.09
SRP54-204ENST00000553923 TTC23Q5W5X9 447 aa2□□□□□ -2.09
SRP54-204ENST00000553923 TTC19Q6DKK2 380 aaPredicted RBP2□□□□□ -2.09
SRP54-204ENST00000553923 RTL6Q6ICC9 239 aa2□□□□□ -2.09
SRP54-204ENST00000553923 SNRNP48Q6IEG0 339 aaKnown RBP2□□□□□ -2.09
SRP54-204ENST00000553923 ZSCAN25Q6NSZ9 544 aa2□□□□□ -2.09
SRP54-204ENST00000553923 FAM159AQ6UWV7 190 aa2□□□□□ -2.09
SRP54-204ENST00000553923 SYT10Q6XYQ8 523 aa2□□□□□ -2.09
SRP54-204ENST00000553923 KDM7AQ6ZMT4 941 aa2□□□□□ -2.09
SRP54-204ENST00000553923 CDHR3Q6ZTQ4 885 aa2□□□□□ -2.09
SRP54-204ENST00000553923 Q75L30 129 aa2□□□□□ -2.09
SRP54-204ENST00000553923 ANKRD33Q7Z3H0 272 aa2□□□□□ -2.09
SRP54-204ENST00000553923 GPR141Q7Z602 305 aa2□□□□□ -2.09
SRP54-204ENST00000553923 YRDCQ86U90 279 aaKnown RBP2□□□□□ -2.09
SRP54-204ENST00000553923 FAM131BQ86XD5 332 aa2□□□□□ -2.09
SRP54-204ENST00000553923 HIST2H2ABQ8IUE6 130 aaPredicted RBP2□□□□□ -2.09
SRP54-204ENST00000553923 IQCF2Q8IXL9 164 aa2□□□□□ -2.09
SRP54-204ENST00000553923 EID3Q8N140 333 aa2□□□□□ -2.09
SRP54-204ENST00000553923 CPSF7Q8N684 471 aaKnown RBP2□□□□□ -2.09
SRP54-204ENST00000553923 CCDC197Q8NCU1 140 aa2□□□□□ -2.09
SRP54-204ENST00000553923 RDM1Q8NG50 284 aa2□□□□□ -2.09
SRP54-204ENST00000553923 OR4L1Q8NH43 312 aa2□□□□□ -2.09
SRP54-204ENST00000553923 OR52J3Q8NH60 311 aa2□□□□□ -2.09
SRP54-204ENST00000553923 TRMT10AQ8TBZ6 339 aaKnown RBP2□□□□□ -2.09
SRP54-204ENST00000553923 SLC22A8Q8TCC7 542 aa2□□□□□ -2.09
SRP54-204ENST00000553923 MIPOL1Q8TD10 442 aa2□□□□□ -2.09
SRP54-204ENST00000553923 SAP25Q8TEE9 199 aa2□□□□□ -2.09
SRP54-204ENST00000553923 CHPT1Q8WUD6 406 aa2□□□□□ -2.09
SRP54-204ENST00000553923 GIMAP1Q8WWP7 306 aa2□□□□□ -2.09
SRP54-204ENST00000553923 OSTF1Q92882 214 aa2□□□□□ -2.09
SRP54-204ENST00000553923 PEX13Q92968 403 aa2□□□□□ -2.09
SRP54-204ENST00000553923 HIST1H2ACQ93077 130 aa2□□□□□ -2.09
SRP54-204ENST00000553923 NCLNQ969V3 563 aa2□□□□□ -2.09
SRP54-204ENST00000553923 PINX1Q96BK5 328 aaKnown RBP2□□□□□ -2.09
SRP54-204ENST00000553923 RASD2Q96D21 266 aa2□□□□□ -2.09
SRP54-204ENST00000553923 NSL1Q96IY1 281 aa2□□□□□ -2.09
SRP54-204ENST00000553923 IFT74Q96LB3 600 aa2□□□□□ -2.09
SRP54-204ENST00000553923 GPR137Q96N19 417 aa2□□□□□ -2.09
SRP54-204ENST00000553923 ZNF300Q96RE9 604 aaPredicted RBP2□□□□□ -2.09
SRP54-204ENST00000553923 USP28Q96RU2 1077 aa2□□□□□ -2.09
SRP54-204ENST00000553923 BCL7BQ9BQE9 202 aa2□□□□□ -2.09
SRP54-204ENST00000553923 CBWD1Q9BRT8 395 aa2□□□□□ -2.09
SRP54-204ENST00000553923 SIKE1Q9BRV8 207 aa2□□□□□ -2.09
SRP54-204ENST00000553923 NUP58Q9BVL2 599 aa2□□□□□ -2.09
SRP54-204ENST00000553923 PKIBQ9C010 78 aa2□□□□□ -2.09
SRP54-204ENST00000553923 MAGT1Q9H0U3 335 aa2□□□□□ -2.09
SRP54-204ENST00000553923 GANQ9H2C0 597 aa2□□□□□ -2.09
SRP54-204ENST00000553923 C5orf66Q9H5L9 145 aa2□□□□□ -2.09
SRP54-204ENST00000553923 MED20Q9H944 212 aa2□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms