RNA–Protein interactions for RNA: ENST00000553830.1

PRKCH-206, Transcript of protein kinase C eta, humanhuman

TSL 5

Gene PRKCH, Length 514 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-206ENST00000553830 PDE5AO76074 875 aa13.18□□□□□ -0.3
PRKCH-206ENST00000553830 SEC24DO94855 1032 aaPredicted RBP13.18□□□□□ -0.3
PRKCH-206ENST00000553830 RAB40ALP0C0E4 278 aa13.18□□□□□ -0.3
PRKCH-206ENST00000553830 F8A1P23610 371 aa13.18□□□□□ -0.3
PRKCH-206ENST00000553830 SSTR4P31391 388 aa13.18□□□□□ -0.3
PRKCH-206ENST00000553830 RTP5Q14D33 572 aa13.18□□□□□ -0.3
PRKCH-206ENST00000553830 MLC1Q15049 377 aa13.18□□□□□ -0.3
PRKCH-206ENST00000553830 RUNDC3AQ59EK9 446 aa13.18□□□□□ -0.3
PRKCH-206ENST00000553830 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.18□□□□□ -0.3
PRKCH-206ENST00000553830 NANOGP8Q6NSW7 305 aa13.18□□□□□ -0.3
PRKCH-206ENST00000553830 HACD2Q6Y1H2 254 aa13.18□□□□□ -0.3
PRKCH-206ENST00000553830 BNC2Q6ZN30 1099 aaPredicted RBP13.18□□□□□ -0.3
PRKCH-206ENST00000553830 WDR53Q7Z5U6 358 aaPredicted RBP13.18□□□□□ -0.3
PRKCH-206ENST00000553830 RNF130Q86XS8 419 aa13.18□□□□□ -0.3
PRKCH-206ENST00000553830 RNF148Q8N7C7 305 aa13.18□□□□□ -0.3
PRKCH-206ENST00000553830 NUP43Q8NFH3 380 aa13.18□□□□□ -0.3
PRKCH-206ENST00000553830 OR52R1Q8NGF1 315 aa13.18□□□□□ -0.3
PRKCH-206ENST00000553830 GOT1L1Q8NHS2 421 aaPredicted RBP13.18□□□□□ -0.3
PRKCH-206ENST00000553830 ZFP90Q8TF47 636 aa13.18□□□□□ -0.3
PRKCH-206ENST00000553830 JADE3Q92613 823 aa13.18□□□□□ -0.3
PRKCH-206ENST00000553830 ELP4Q96EB1 424 aa13.18□□□□□ -0.3
PRKCH-206ENST00000553830 CLPTM1LQ96KA5 538 aa13.18□□□□□ -0.3
PRKCH-206ENST00000553830 ANKRD27Q96NW4 1050 aa13.18□□□□□ -0.3
PRKCH-206ENST00000553830 CDRT15Q96T59 188 aa13.18□□□□□ -0.3
PRKCH-206ENST00000553830 CPPED1Q9BRF8 314 aaPredicted RBP13.18□□□□□ -0.3
PRKCH-206ENST00000553830 BTBD10Q9BSF8 475 aa13.18□□□□□ -0.3
PRKCH-206ENST00000553830 THTPAQ9BU02 230 aa13.18□□□□□ -0.3
PRKCH-206ENST00000553830 IKZF5Q9H5V7 419 aa13.18□□□□□ -0.3
PRKCH-206ENST00000553830 NANOGQ9H9S0 305 aa13.18□□□□□ -0.3
PRKCH-206ENST00000553830 GPN2Q9H9Y4 310 aaPredicted RBP13.18□□□□□ -0.3
PRKCH-206ENST00000553830 CXorf21Q9HAI6 301 aa13.18□□□□□ -0.3
PRKCH-206ENST00000553830 TPT1P8Q9HAU6 139 aa13.18□□□□□ -0.3
PRKCH-206ENST00000553830 C3orf14Q9HBI5 128 aa13.18□□□□□ -0.3
PRKCH-206ENST00000553830 C19orf25Q9UFG5 118 aaPredicted RBP13.18□□□□□ -0.3
PRKCH-206ENST00000553830 TCFL5Q9UL49 500 aa13.18□□□□□ -0.3
PRKCH-206ENST00000553830 CLCA3PQ9Y6N3 262 aa13.18□□□□□ -0.3
PRKCH-206ENST00000553830 TRBV5-3A0A0A0MS03 114 aa13.17□□□□□ -0.3
PRKCH-206ENST00000553830 UPK1AO00322 258 aa13.17□□□□□ -0.3
PRKCH-206ENST00000553830 DYRK3O43781 588 aa13.17□□□□□ -0.3
PRKCH-206ENST00000553830 DXOO77932 396 aaKnown RBP13.17□□□□□ -0.3
PRKCH-206ENST00000553830 HOXB9P17482 250 aaPredicted RBP13.17□□□□□ -0.3
PRKCH-206ENST00000553830 SLC6A2P23975 617 aa13.17□□□□□ -0.3
PRKCH-206ENST00000553830 CRATP43155 626 aa13.17□□□□□ -0.3
PRKCH-206ENST00000553830 PRR5P85299 388 aa13.17□□□□□ -0.3
PRKCH-206ENST00000553830 MGAT2Q10469 447 aa13.17□□□□□ -0.3
PRKCH-206ENST00000553830 ZNF155Q12901 538 aaPredicted RBP13.17□□□□□ -0.3
PRKCH-206ENST00000553830 ELAVL1Q15717 326 aaKnown RBP13.17□□□□□ -0.3
PRKCH-206ENST00000553830 DNAL1Q4LDG9 190 aa13.17□□□□□ -0.3
PRKCH-206ENST00000553830 COX20Q5RI15 118 aa13.17□□□□□ -0.3
PRKCH-206ENST00000553830 TNFAIP8L2Q6P589 184 aaPredicted RBP13.17□□□□□ -0.3
PRKCH-206ENST00000553830 PAPD4Q6PIY7 484 aaKnown RBP13.17□□□□□ -0.3
PRKCH-206ENST00000553830 IGF2-ASQ6U949 168 aa13.17□□□□□ -0.3
PRKCH-206ENST00000553830 MED25Q71SY5 747 aa13.17□□□□□ -0.3
PRKCH-206ENST00000553830 C6orf120Q7Z4R8 191 aa13.17□□□□□ -0.3
PRKCH-206ENST00000553830 CPEB2Q7Z5Q1 589 aaKnown RBP13.17□□□□□ -0.3
PRKCH-206ENST00000553830 IFNEQ86WN2 208 aa13.17□□□□□ -0.3
PRKCH-206ENST00000553830 ZNF321PQ8N8H1 164 aa13.17□□□□□ -0.3
PRKCH-206ENST00000553830 OR56A1Q8NGH5 318 aa13.17□□□□□ -0.3
PRKCH-206ENST00000553830 DNAJB8Q8NHS0 232 aa13.17□□□□□ -0.3
PRKCH-206ENST00000553830 SFXN5Q8TD22 340 aa13.17□□□□□ -0.3
PRKCH-206ENST00000553830 ZNF675Q8TD23 568 aa13.17□□□□□ -0.3
PRKCH-206ENST00000553830 PTPMT1Q8WUK0 201 aaPredicted RBP13.17□□□□□ -0.3
PRKCH-206ENST00000553830 TMEM125Q96AQ2 219 aa13.17□□□□□ -0.3
PRKCH-206ENST00000553830 MCUR1Q96AQ8 359 aa13.17□□□□□ -0.3
PRKCH-206ENST00000553830 KIAA1143Q96AT1 154 aaPredicted RBP13.17□□□□□ -0.3
PRKCH-206ENST00000553830 C16orf58Q96GQ5 468 aa13.17□□□□□ -0.3
PRKCH-206ENST00000553830 HOPXQ9BPY8 73 aaPredicted RBP13.17□□□□□ -0.3
PRKCH-206ENST00000553830 LRMDAQ9H2I8 198 aa13.17□□□□□ -0.3
PRKCH-206ENST00000553830 CMTM6Q9NX76 183 aa13.17□□□□□ -0.3
PRKCH-206ENST00000553830 IL17BQ9UHF5 180 aa13.17□□□□□ -0.3
PRKCH-206ENST00000553830 PIEZO1Q92508 2521 aa13.16□□□□□ -0.3
PRKCH-206ENST00000553830 C15orf38-AP3S2A0A0A6YYH1 394 aa13.16□□□□□ -0.3
PRKCH-206ENST00000553830 EVPLLA8MZ36 301 aa13.16□□□□□ -0.3
PRKCH-206ENST00000553830 C21orf140B9A014 251 aa13.16□□□□□ -0.3
PRKCH-206ENST00000553830 NME4O00746 187 aa13.16□□□□□ -0.3
PRKCH-206ENST00000553830 DNAJC8O75937 253 aaPredicted RBP13.16□□□□□ -0.3
PRKCH-206ENST00000553830 KRT75O95678 551 aa13.16□□□□□ -0.3
PRKCH-206ENST00000553830 NPPAP01160 153 aa13.16□□□□□ -0.3
PRKCH-206ENST00000553830 CD63P08962 238 aa13.16□□□□□ -0.3
PRKCH-206ENST00000553830 ZCCHC18P0CG32 403 aa13.16□□□□□ -0.3
PRKCH-206ENST00000553830 LIPCP11150 499 aa13.16□□□□□ -0.3
PRKCH-206ENST00000553830 TCN1P20061 433 aaPredicted RBP13.16□□□□□ -0.3
PRKCH-206ENST00000553830 SOX18P35713 384 aa13.16□□□□□ -0.3
PRKCH-206ENST00000553830 PGM1P36871 562 aa13.16□□□□□ -0.3
PRKCH-206ENST00000553830 MAP4K2Q12851 820 aa13.16□□□□□ -0.3
PRKCH-206ENST00000553830 SRSF6Q13247 344 aaKnown RBP13.16□□□□□ -0.3
PRKCH-206ENST00000553830 BIKQ13323 160 aa13.16□□□□□ -0.3
PRKCH-206ENST00000553830 IL10RAQ13651 578 aa13.16□□□□□ -0.3
PRKCH-206ENST00000553830 LASP1Q14847 261 aaKnown RBP13.16□□□□□ -0.3
PRKCH-206ENST00000553830 TBC1D25Q3MII6 688 aa13.16□□□□□ -0.3
PRKCH-206ENST00000553830 FHL5Q5TD97 284 aa13.16□□□□□ -0.3
PRKCH-206ENST00000553830 SAXO2Q658L1 398 aa13.16□□□□□ -0.3
PRKCH-206ENST00000553830 CPZQ66K79 652 aa13.16□□□□□ -0.3
PRKCH-206ENST00000553830 TMEM64Q6YI46 380 aa13.16□□□□□ -0.3
PRKCH-206ENST00000553830 ARPINQ7Z6K5 226 aa13.16□□□□□ -0.3
PRKCH-206ENST00000553830 YTHDF3Q7Z739 585 aaKnown RBP13.16□□□□□ -0.3
PRKCH-206ENST00000553830 OR10A6Q8NH74 314 aa13.16□□□□□ -0.3
PRKCH-206ENST00000553830 OR14A16Q8NHC5 309 aa13.16□□□□□ -0.3
PRKCH-206ENST00000553830 PSMA8Q8TAA3 256 aa13.16□□□□□ -0.3
PRKCH-206ENST00000553830 SLC2A12Q8TD20 617 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms