RNA–Protein interactions for RNA: ENST00000553529.5

SHMT2-206, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-206ENST00000553529 CDK2AP1O14519 115 aa16.75■□□□□ 0.27
SHMT2-206ENST00000553529 PRRG2O14669 202 aa16.75■□□□□ 0.27
SHMT2-206ENST00000553529 PCDH7O60245 1069 aa16.75■□□□□ 0.27
SHMT2-206ENST00000553529 MLYCDO95822 493 aa16.75■□□□□ 0.27
SHMT2-206ENST00000553529 PORP16435 677 aaPredicted RBP16.75■□□□□ 0.27
SHMT2-206ENST00000553529 TRPC1P48995 793 aa16.75■□□□□ 0.27
SHMT2-206ENST00000553529 NAGLUP54802 743 aa16.75■□□□□ 0.27
SHMT2-206ENST00000553529 WNT3P56703 355 aa16.75■□□□□ 0.27
SHMT2-206ENST00000553529 LCP2Q13094 533 aa16.75■□□□□ 0.27
SHMT2-206ENST00000553529 ART3Q13508 389 aa16.75■□□□□ 0.27
SHMT2-206ENST00000553529 ZNF630Q2M218 657 aaPredicted RBP16.75■□□□□ 0.27
SHMT2-206ENST00000553529 SLC22A10Q63ZE4 541 aa16.75■□□□□ 0.27
SHMT2-206ENST00000553529 CLEC6AQ6EIG7 209 aa16.75■□□□□ 0.27
SHMT2-206ENST00000553529 OR52R1Q8NGF1 315 aa16.75■□□□□ 0.27
SHMT2-206ENST00000553529 CDC26Q8NHZ8 85 aa16.75■□□□□ 0.27
SHMT2-206ENST00000553529 KAT2AQ92830 837 aa16.75■□□□□ 0.27
SHMT2-206ENST00000553529 EXOSC8Q96B26 276 aaKnown RBP16.75■□□□□ 0.27
SHMT2-206ENST00000553529 SDCCAG3Q96C92 435 aa16.75■□□□□ 0.27
SHMT2-206ENST00000553529 ART5Q96L15 291 aa16.75■□□□□ 0.27
SHMT2-206ENST00000553529 UCK2Q9BZX2 261 aa16.75■□□□□ 0.27
SHMT2-206ENST00000553529 IL1RL2Q9HB29 575 aa16.75■□□□□ 0.27
SHMT2-206ENST00000553529 AHSPQ9NZD4 102 aa16.75■□□□□ 0.27
SHMT2-206ENST00000553529 FETUBQ9UGM5 382 aa16.75■□□□□ 0.27
SHMT2-206ENST00000553529 ENTPD4Q9Y227 616 aa16.75■□□□□ 0.27
SHMT2-206ENST00000553529 DLGAP4Q9Y2H0 992 aa16.75■□□□□ 0.27
SHMT2-206ENST00000553529 PLLPQ9Y342 182 aa16.75■□□□□ 0.27
SHMT2-206ENST00000553529 KIAA1549Q9HCM3 1950 aa16.75■□□□□ 0.27
SHMT2-206ENST00000553529 C1orf226A1L170 272 aa16.74■□□□□ 0.27
SHMT2-206ENST00000553529 NKX2-6A6NCS4 301 aa16.74■□□□□ 0.27
SHMT2-206ENST00000553529 GLRA3O75311 464 aa16.74■□□□□ 0.27
SHMT2-206ENST00000553529 GSTA1P08263 222 aa16.74■□□□□ 0.27
SHMT2-206ENST00000553529 MYL2P10916 166 aa16.74■□□□□ 0.27
SHMT2-206ENST00000553529 CREB1P16220 341 aa16.74■□□□□ 0.27
SHMT2-206ENST00000553529 KRT15P19012 456 aa16.74■□□□□ 0.27
SHMT2-206ENST00000553529 KCNJ2P63252 427 aa16.74■□□□□ 0.27
SHMT2-206ENST00000553529 ZNF800Q2TB10 664 aaPredicted RBP eCLIP16.74■□□□□ 0.27
SHMT2-206ENST00000553529 FNDC7Q5VTL7 733 aa16.74■□□□□ 0.27
SHMT2-206ENST00000553529 RTL6Q6ICC9 239 aa16.74■□□□□ 0.27
SHMT2-206ENST00000553529 GK5Q6ZS86 529 aa16.74■□□□□ 0.27
SHMT2-206ENST00000553529 TRILQ7L0X0 811 aa16.74■□□□□ 0.27
SHMT2-206ENST00000553529 PAGE2Q7Z2X7 111 aa16.74■□□□□ 0.27
SHMT2-206ENST00000553529 VWA5B2Q8N398 1253 aa16.74■□□□□ 0.27
SHMT2-206ENST00000553529 FBXW8Q8N3Y1 598 aa16.74■□□□□ 0.27
SHMT2-206ENST00000553529 FAM109AQ8N4B1 249 aa16.74■□□□□ 0.27
SHMT2-206ENST00000553529 MYRIPQ8NFW9 859 aa16.74■□□□□ 0.27
SHMT2-206ENST00000553529 OR9A2Q8NGT5 310 aa16.74■□□□□ 0.27
SHMT2-206ENST00000553529 C16orf78Q8WTQ4 265 aa16.74■□□□□ 0.27
SHMT2-206ENST00000553529 SMC6Q96SB8 1091 aa16.74■□□□□ 0.27
SHMT2-206ENST00000553529 PELOQ9BRX2 385 aaKnown RBP16.74■□□□□ 0.27
SHMT2-206ENST00000553529 ZNF703Q9H7S9 590 aaPredicted RBP16.74■□□□□ 0.27
SHMT2-206ENST00000553529 BCAP29Q9UHQ4 241 aa16.74■□□□□ 0.27
SHMT2-206ENST00000553529 UTS2RQ9UKP6 389 aa16.74■□□□□ 0.27
SHMT2-206ENST00000553529 POLR3HQ9Y535 204 aaPredicted RBP16.74■□□□□ 0.27
SHMT2-206ENST00000553529 NINQ8N4C6 2090 aa16.74■□□□□ 0.27
SHMT2-206ENST00000553529 TLDC2A0PJX2 215 aa16.73■□□□□ 0.27
SHMT2-206ENST00000553529 SYNDIG1LA6NDD5 238 aa16.73■□□□□ 0.27
SHMT2-206ENST00000553529 E9PLN8 166 aa16.73■□□□□ 0.27
SHMT2-206ENST00000553529 ACOT7O00154 380 aa16.73■□□□□ 0.27
SHMT2-206ENST00000553529 DYRK3O43781 588 aa16.73■□□□□ 0.27
SHMT2-206ENST00000553529 ULK1O75385 1050 aa16.73■□□□□ 0.27
SHMT2-206ENST00000553529 ESRRBO95718 433 aa16.73■□□□□ 0.27
SHMT2-206ENST00000553529 KRT6AP02538 564 aa16.73■□□□□ 0.27
SHMT2-206ENST00000553529 KRT6BP04259 564 aa16.73■□□□□ 0.27
SHMT2-206ENST00000553529 KRT4P19013 534 aa16.73■□□□□ 0.27
SHMT2-206ENST00000553529 TNFRSF8P28908 595 aa16.73■□□□□ 0.27
SHMT2-206ENST00000553529 KRT6CP48668 564 aa16.73■□□□□ 0.27
SHMT2-206ENST00000553529 NUP107P57740 925 aa16.73■□□□□ 0.27
SHMT2-206ENST00000553529 CSTF3Q12996 717 aaKnown RBP16.73■□□□□ 0.27
SHMT2-206ENST00000553529 NTRK2Q16620 822 aa16.73■□□□□ 0.27
SHMT2-206ENST00000553529 GXYLT1Q4G148 440 aa16.73■□□□□ 0.27
SHMT2-206ENST00000553529 ZNF585AQ6P3V2 769 aa16.73■□□□□ 0.27
SHMT2-206ENST00000553529 RPTNQ6XPR3 784 aa16.73■□□□□ 0.27
SHMT2-206ENST00000553529 SLC22A16Q86VW1 577 aa16.73■□□□□ 0.27
SHMT2-206ENST00000553529 LURAP1LQ8IV03 231 aa16.73■□□□□ 0.27
SHMT2-206ENST00000553529 SLC22A9Q8IVM8 553 aa16.73■□□□□ 0.27
SHMT2-206ENST00000553529 C10orf107Q8IVU9 208 aa16.73■□□□□ 0.27
SHMT2-206ENST00000553529 MCEMP1Q8IX19 187 aa16.73■□□□□ 0.27
SHMT2-206ENST00000553529 CCDC116Q8IYX3 515 aa16.73■□□□□ 0.27
SHMT2-206ENST00000553529 C11orf24Q96F05 449 aaPredicted RBP16.73■□□□□ 0.27
SHMT2-206ENST00000553529 SGCZQ96LD1 299 aa16.73■□□□□ 0.27
SHMT2-206ENST00000553529 NODALQ96S42 347 aa16.73■□□□□ 0.27
SHMT2-206ENST00000553529 VKORC1Q9BQB6 163 aa16.73■□□□□ 0.27
SHMT2-206ENST00000553529 MECRQ9BV79 373 aa16.73■□□□□ 0.27
SHMT2-206ENST00000553529 SLC17A7Q9P2U7 560 aa16.73■□□□□ 0.27
SHMT2-206ENST00000553529 DCDC2Q9UHG0 476 aa16.73■□□□□ 0.27
SHMT2-206ENST00000553529 ZNF639Q9UID6 485 aa16.73■□□□□ 0.27
SHMT2-206ENST00000553529 MCM8Q9UJA3 840 aa16.73■□□□□ 0.27
SHMT2-206ENST00000553529 EXO1Q9UQ84 846 aaKnown RBP16.73■□□□□ 0.27
SHMT2-206ENST00000553529 FIS1Q9Y3D6 152 aa16.73■□□□□ 0.27
SHMT2-206ENST00000553529 FAM215AQ9Y5M1 114 aa16.73■□□□□ 0.27
SHMT2-206ENST00000553529 NPFFR2Q9Y5X5 522 aa16.73■□□□□ 0.27
SHMT2-206ENST00000553529 CSMD1Q96PZ7 3565 aa16.72■□□□□ 0.27
SHMT2-206ENST00000553529 FAM90A27PA6NNH2 459 aa16.72■□□□□ 0.27
SHMT2-206ENST00000553529 TMEM233B4DJY2 109 aa16.72■□□□□ 0.27
SHMT2-206ENST00000553529 SPAG7O75391 227 aa16.72■□□□□ 0.27
SHMT2-206ENST00000553529 IGHG3P01860 377 aa16.72■□□□□ 0.27
SHMT2-206ENST00000553529 ATP1B1P05026 303 aa16.72■□□□□ 0.27
SHMT2-206ENST00000553529 TIA1P31483 386 aaKnown RBP eCLIP16.72■□□□□ 0.27
SHMT2-206ENST00000553529 GALNSP34059 522 aa16.72■□□□□ 0.27
SHMT2-206ENST00000553529 DEKP35659 375 aaKnown RBP16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms