RNA–Protein interactions for RNA: ENST00000553488.5

ATXN3-219, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-219ENST00000553488 SPACA9Q96E40 222 aaPredicted RBP6.66□□□□□ -1.34
ATXN3-219ENST00000553488 LRRC46Q96FV0 321 aa6.66□□□□□ -1.34
ATXN3-219ENST00000553488 HIST1H2AHQ96KK5 128 aa6.66□□□□□ -1.34
ATXN3-219ENST00000553488 Q96MF0 132 aa6.66□□□□□ -1.34
ATXN3-219ENST00000553488 PIP5K1AQ99755 562 aa6.66□□□□□ -1.34
ATXN3-219ENST00000553488 HIST1H2AJQ99878 128 aa6.66□□□□□ -1.34
ATXN3-219ENST00000553488 DESI2Q9BSY9 194 aa6.66□□□□□ -1.34
ATXN3-219ENST00000553488 FAM167BQ9BTA0 163 aa6.66□□□□□ -1.34
ATXN3-219ENST00000553488 H2AFJQ9BTM1 129 aa6.66□□□□□ -1.34
ATXN3-219ENST00000553488 UBQLN3Q9H347 655 aa6.66□□□□□ -1.34
ATXN3-219ENST00000553488 EXO5Q9H790 373 aa6.66□□□□□ -1.34
ATXN3-219ENST00000553488 C20orf96Q9NUD7 363 aaPredicted RBP6.66□□□□□ -1.34
ATXN3-219ENST00000553488 TAS2R13Q9NYV9 303 aa6.66□□□□□ -1.34
ATXN3-219ENST00000553488 CNOT11Q9UKZ1 510 aaKnown RBP6.66□□□□□ -1.34
ATXN3-219ENST00000553488 BOKQ9UMX3 212 aaPredicted RBP6.66□□□□□ -1.34
ATXN3-219ENST00000553488 DAPP1Q9UN19 280 aa6.66□□□□□ -1.34
ATXN3-219ENST00000553488 MRPS33Q9Y291 106 aaKnown RBP6.66□□□□□ -1.34
ATXN3-219ENST00000553488 ZKSCAN5Q9Y2L8 839 aa6.66□□□□□ -1.34
ATXN3-219ENST00000553488 CLCA3PQ9Y6N3 262 aa6.66□□□□□ -1.34
ATXN3-219ENST00000553488 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.65□□□□□ -1.344e-12■■■□□ 18.3
ATXN3-219ENST00000553488 TLDC2A0PJX2 215 aa6.65□□□□□ -1.34
ATXN3-219ENST00000553488 LRIT2A6NDA9 550 aa6.65□□□□□ -1.34
ATXN3-219ENST00000553488 TRIM64A6NGJ6 449 aa6.65□□□□□ -1.34
ATXN3-219ENST00000553488 TRIM64BA6NI03 449 aa6.65□□□□□ -1.34
ATXN3-219ENST00000553488 SDR42E2A6NKP2 422 aa6.65□□□□□ -1.34
ATXN3-219ENST00000553488 AHRRA9YTQ3 701 aa6.65□□□□□ -1.34
ATXN3-219ENST00000553488 B3GALT2O43825 422 aa6.65□□□□□ -1.34
ATXN3-219ENST00000553488 CTNSO60931 367 aa6.65□□□□□ -1.34
ATXN3-219ENST00000553488 LRATO95237 230 aa6.65□□□□□ -1.34
ATXN3-219ENST00000553488 GUCA1CO95843 209 aa6.65□□□□□ -1.34
ATXN3-219ENST00000553488 IL18BPO95998 194 aa6.65□□□□□ -1.34
ATXN3-219ENST00000553488 IFNA16P05015 189 aa6.65□□□□□ -1.34
ATXN3-219ENST00000553488 ENO2P09104 434 aaPredicted RBP6.65□□□□□ -1.34
ATXN3-219ENST00000553488 SAT1P21673 171 aa6.65□□□□□ -1.34
ATXN3-219ENST00000553488 TRPC1P48995 793 aa6.65□□□□□ -1.34
ATXN3-219ENST00000553488 VPS41P49754 854 aa6.65□□□□□ -1.34
ATXN3-219ENST00000553488 TERF1P54274 439 aa6.65□□□□□ -1.34
ATXN3-219ENST00000553488 KCNJ2P63252 427 aa6.65□□□□□ -1.34
ATXN3-219ENST00000553488 IGLV3-21P80748 117 aaPredicted RBP6.65□□□□□ -1.34
ATXN3-219ENST00000553488 KRTAP1-1Q07627 177 aa6.65□□□□□ -1.34
ATXN3-219ENST00000553488 ASPHQ12797 758 aa6.65□□□□□ -1.34
ATXN3-219ENST00000553488 KIF5AQ12840 1032 aa6.65□□□□□ -1.34
ATXN3-219ENST00000553488 DUSP8Q13202 625 aa6.65□□□□□ -1.34
ATXN3-219ENST00000553488 RBBP5Q15291 538 aaKnown RBP6.65□□□□□ -1.34
ATXN3-219ENST00000553488 TRIP13Q15645 432 aaPredicted RBP6.65□□□□□ -1.34
ATXN3-219ENST00000553488 HSP90AA5PQ58FG0 334 aa6.65□□□□□ -1.34
ATXN3-219ENST00000553488 DCST1Q5T197 706 aa6.65□□□□□ -1.34
ATXN3-219ENST00000553488 ADNP2Q6IQ32 1131 aa6.65□□□□□ -1.34
ATXN3-219ENST00000553488 ABHD17CQ6PCB6 329 aa6.65□□□□□ -1.34
ATXN3-219ENST00000553488 PRSS57Q6UWY2 283 aa6.65□□□□□ -1.34
ATXN3-219ENST00000553488 ZNF793Q6ZN11 406 aa6.65□□□□□ -1.34
ATXN3-219ENST00000553488 GSTA5Q7RTV2 222 aa6.65□□□□□ -1.34
ATXN3-219ENST00000553488 THOC6Q86W42 341 aaKnown RBP6.65□□□□□ -1.34
ATXN3-219ENST00000553488 CNTN4Q8IWV2 1026 aa6.65□□□□□ -1.34
ATXN3-219ENST00000553488 PALM2Q8IXS6 379 aa6.65□□□□□ -1.34
ATXN3-219ENST00000553488 MCUQ8NE86 351 aa6.65□□□□□ -1.34
ATXN3-219ENST00000553488 OR2L5Q8NG80 312 aa6.65□□□□□ -1.34
ATXN3-219ENST00000553488 OR10G3Q8NGC4 313 aa6.65□□□□□ -1.34
ATXN3-219ENST00000553488 PPP1R14CQ8TAE6 165 aa6.65□□□□□ -1.34
ATXN3-219ENST00000553488 CALML6Q8TD86 181 aa6.65□□□□□ -1.34
ATXN3-219ENST00000553488 HSPBAP1Q96EW2 488 aa6.65□□□□□ -1.34
ATXN3-219ENST00000553488 FAR2Q96K12 515 aa6.65□□□□□ -1.34
ATXN3-219ENST00000553488 SIGLEC10Q96LC7 697 aa6.65□□□□□ -1.34
ATXN3-219ENST00000553488 TIMP4Q99727 224 aa6.65□□□□□ -1.34
ATXN3-219ENST00000553488 YIPF4Q9BSR8 244 aa6.65□□□□□ -1.34
ATXN3-219ENST00000553488 ALOXE3Q9BYJ1 711 aa6.65□□□□□ -1.34
ATXN3-219ENST00000553488 TRIM5Q9C035 493 aa6.65□□□□□ -1.34
ATXN3-219ENST00000553488 TSPY26PQ9H489 355 aa6.65□□□□□ -1.34
ATXN3-219ENST00000553488 XAB2Q9HCS7 855 aaKnown RBP6.65□□□□□ -1.34
ATXN3-219ENST00000553488 IARS2Q9NSE4 1012 aaKnown RBP6.65□□□□□ -1.34
ATXN3-219ENST00000553488 SLC17A6Q9P2U8 582 aa6.65□□□□□ -1.34
ATXN3-219ENST00000553488 TRPS1Q9UHF7 1281 aa6.65□□□□□ -1.34
ATXN3-219ENST00000553488 SLC22A14Q9Y267 594 aa6.65□□□□□ -1.34
ATXN3-219ENST00000553488 TMA7Q9Y2S6 64 aaKnown RBP6.65□□□□□ -1.34
ATXN3-219ENST00000553488 GPR55Q9Y2T6 319 aaPredicted RBP6.65□□□□□ -1.34
ATXN3-219ENST00000553488 TESMINQ9Y4I5 508 aa6.65□□□□□ -1.34
ATXN3-219ENST00000553488 C15orf38-AP3S2A0A0A6YYH1 394 aa6.64□□□□□ -1.35
ATXN3-219ENST00000553488 MAGEB16A2A368 324 aa6.64□□□□□ -1.35
ATXN3-219ENST00000553488 SH3D21A4FU49 640 aa6.64□□□□□ -1.35
ATXN3-219ENST00000553488 CD8B2A6NJW9 211 aa6.64□□□□□ -1.35
ATXN3-219ENST00000553488 EEF1E1-BLOC1S5C9J1V9 151 aa6.64□□□□□ -1.35
ATXN3-219ENST00000553488 HRKO00198 91 aa6.64□□□□□ -1.35
ATXN3-219ENST00000553488 ETV2O00321 342 aaPredicted RBP6.64□□□□□ -1.35
ATXN3-219ENST00000553488 SMAD7O15105 426 aaKnown RBP6.64□□□□□ -1.35
ATXN3-219ENST00000553488 ARHGEF9O43307 516 aa6.64□□□□□ -1.35
ATXN3-219ENST00000553488 EEF1E1O43324 174 aaKnown RBP6.64□□□□□ -1.35
ATXN3-219ENST00000553488 PRAMEF4O60810 478 aa6.64□□□□□ -1.35
ATXN3-219ENST00000553488 LDB3O75112 727 aa6.64□□□□□ -1.35
ATXN3-219ENST00000553488 TRIM3O75382 744 aaPredicted RBP6.64□□□□□ -1.35
ATXN3-219ENST00000553488 FGGP02679 453 aa6.64□□□□□ -1.35
ATXN3-219ENST00000553488 HPNP05981 417 aa6.64□□□□□ -1.35
ATXN3-219ENST00000553488 CCDC175P0C221 793 aa6.64□□□□□ -1.35
ATXN3-219ENST00000553488 CTSSP25774 331 aa6.64□□□□□ -1.35
ATXN3-219ENST00000553488 GDF1P27539 372 aa6.64□□□□□ -1.35
ATXN3-219ENST00000553488 GSTM2P28161 218 aa6.64□□□□□ -1.35
ATXN3-219ENST00000553488 SLC6A12P48065 614 aa6.64□□□□□ -1.35
ATXN3-219ENST00000553488 AGFG1P52594 562 aaKnown RBP6.64□□□□□ -1.35
ATXN3-219ENST00000553488 PLA2G16P53816 162 aa6.64□□□□□ -1.35
ATXN3-219ENST00000553488 ERVFRD-1P60508 538 aa6.64□□□□□ -1.35
ATXN3-219ENST00000553488 IL2P60568 153 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms