RNA–Protein interactions for RNA: ENST00000553474.5

SHMT2-205, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-205ENST00000553474 HCN2Q9UL51 889 aa12.2□□□□□ -0.46
SHMT2-205ENST00000553474 UNC80Q8N2C7 3258 aa12.2□□□□□ -0.46
SHMT2-205ENST00000553474 IGKV1-8A0A0C4DH67 115 aa12.2□□□□□ -0.46
SHMT2-205ENST00000553474 IRGMA1A4Y4 181 aa12.2□□□□□ -0.46
SHMT2-205ENST00000553474 AGAP5A6NIR3 686 aa12.2□□□□□ -0.46
SHMT2-205ENST00000553474 PRICKLE3O43900 615 aaPredicted RBP12.2□□□□□ -0.46
SHMT2-205ENST00000553474 LCMT2O60294 686 aaKnown RBP12.2□□□□□ -0.46
SHMT2-205ENST00000553474 B4GALT2O60909 372 aa12.2□□□□□ -0.46
SHMT2-205ENST00000553474 FHP07954 510 aa12.2□□□□□ -0.46
SHMT2-205ENST00000553474 ACP5P13686 325 aa12.2□□□□□ -0.46
SHMT2-205ENST00000553474 HIST1H1TP22492 207 aaPredicted RBP12.2□□□□□ -0.46
SHMT2-205ENST00000553474 CSTF2P33240 577 aaKnown RBP eCLIP12.2□□□□□ -0.46
SHMT2-205ENST00000553474 ETV6P41212 452 aa12.2□□□□□ -0.46
SHMT2-205ENST00000553474 XKP51811 444 aa12.2□□□□□ -0.46
SHMT2-205ENST00000553474 NUDT6P53370 316 aa12.2□□□□□ -0.46
SHMT2-205ENST00000553474 RPS26P62854 115 aaKnown RBP12.2□□□□□ -0.46
SHMT2-205ENST00000553474 PRR5P85299 388 aa12.2□□□□□ -0.46
SHMT2-205ENST00000553474 CDC20Q12834 499 aa12.2□□□□□ -0.46
SHMT2-205ENST00000553474 CEBPEQ15744 281 aa12.2□□□□□ -0.46
SHMT2-205ENST00000553474 UAP1L1Q3KQV9 507 aa12.2□□□□□ -0.46
SHMT2-205ENST00000553474 TANGO2Q6ICL3 276 aa12.2□□□□□ -0.46
SHMT2-205ENST00000553474 PARM1Q6UWI2 310 aa12.2□□□□□ -0.46
SHMT2-205ENST00000553474 ADCK2Q7Z695 626 aa12.2□□□□□ -0.46
SHMT2-205ENST00000553474 SFTPA1Q8IWL2 248 aa12.2□□□□□ -0.46
SHMT2-205ENST00000553474 OR2L5Q8NG80 312 aa12.2□□□□□ -0.46
SHMT2-205ENST00000553474 FGF14Q92915 247 aa12.2□□□□□ -0.46
SHMT2-205ENST00000553474 RAB8BQ92930 207 aa12.2□□□□□ -0.46
SHMT2-205ENST00000553474 TRNT1Q96Q11 434 aaKnown RBP12.2□□□□□ -0.46
SHMT2-205ENST00000553474 BBS4Q96RK4 519 aa12.2□□□□□ -0.46
SHMT2-205ENST00000553474 ABCG4Q9H172 646 aa12.2□□□□□ -0.46
SHMT2-205ENST00000553474 MBNL1Q9NR56 388 aaKnown RBP12.2□□□□□ -0.46
SHMT2-205ENST00000553474 SELENONQ9NZV5 590 aa12.2□□□□□ -0.46
SHMT2-205ENST00000553474 LIPT1Q9Y234 373 aa12.2□□□□□ -0.46
SHMT2-205ENST00000553474 WDR37Q9Y2I8 494 aa12.2□□□□□ -0.46
SHMT2-205ENST00000553474 SYT5O00445 386 aa12.19□□□□□ -0.46
SHMT2-205ENST00000553474 UPK1BO75841 260 aa12.19□□□□□ -0.46
SHMT2-205ENST00000553474 SNX4O95219 450 aa12.19□□□□□ -0.46
SHMT2-205ENST00000553474 SCG5P05408 212 aa12.19□□□□□ -0.46
SHMT2-205ENST00000553474 HOXC4P09017 264 aaPredicted RBP12.19□□□□□ -0.46
SHMT2-205ENST00000553474 ENDOUP21128 410 aaKnown RBP12.19□□□□□ -0.46
SHMT2-205ENST00000553474 NDUFS1P28331 727 aa12.19□□□□□ -0.46
SHMT2-205ENST00000553474 TNFRSF4P43489 277 aa12.19□□□□□ -0.46
SHMT2-205ENST00000553474 PSMD7P51665 324 aa12.19□□□□□ -0.46
SHMT2-205ENST00000553474 NCBP2P52298 156 aaKnown RBP eCLIP12.19□□□□□ -0.46
SHMT2-205ENST00000553474 KRT33BQ14525 404 aa12.19□□□□□ -0.46
SHMT2-205ENST00000553474 PUS10Q3MIT2 529 aaKnown RBP12.19□□□□□ -0.46
SHMT2-205ENST00000553474 AGAP7PQ5VUJ5 663 aa12.19□□□□□ -0.46
SHMT2-205ENST00000553474 PGBD2Q6P3X8 592 aa12.19□□□□□ -0.46
SHMT2-205ENST00000553474 BTLAQ7Z6A9 289 aa12.19□□□□□ -0.46
SHMT2-205ENST00000553474 FAM26EQ8N5C1 309 aa12.19□□□□□ -0.46
SHMT2-205ENST00000553474 ASB12Q8WXK4 309 aa12.19□□□□□ -0.46
SHMT2-205ENST00000553474 MS4A6EQ96DS6 147 aa12.19□□□□□ -0.46
SHMT2-205ENST00000553474 SCARF2Q96GP6 870 aaPredicted RBP12.19□□□□□ -0.46
SHMT2-205ENST00000553474 TMEM80Q96HE8 168 aa12.19□□□□□ -0.46
SHMT2-205ENST00000553474 PRRC1Q96M27 445 aa12.19□□□□□ -0.46
SHMT2-205ENST00000553474 C17orf62Q9BQA9 187 aa12.19□□□□□ -0.46
SHMT2-205ENST00000553474 MND1Q9BWT6 205 aa12.19□□□□□ -0.46
SHMT2-205ENST00000553474 TAPBPLQ9BX59 468 aa12.19□□□□□ -0.46
SHMT2-205ENST00000553474 PINK1Q9BXM7 581 aa12.19□□□□□ -0.46
SHMT2-205ENST00000553474 POLDIP3Q9BY77 421 aaKnown RBP12.19□□□□□ -0.46
SHMT2-205ENST00000553474 OSGEPL1Q9H4B0 414 aa12.19□□□□□ -0.46
SHMT2-205ENST00000553474 SERHL2Q9H4I8 314 aa12.19□□□□□ -0.46
SHMT2-205ENST00000553474 ANKRD19PQ9H560 264 aa12.19□□□□□ -0.46
SHMT2-205ENST00000553474 KIR3DX1Q9H7L2 352 aa12.19□□□□□ -0.46
SHMT2-205ENST00000553474 GIMAP4Q9NUV9 329 aa12.19□□□□□ -0.46
SHMT2-205ENST00000553474 IMP3Q9NV31 184 aaKnown RBP12.19□□□□□ -0.46
SHMT2-205ENST00000553474 RHCGQ9UBD6 479 aa12.19□□□□□ -0.46
SHMT2-205ENST00000553474 A4GNTQ9UNA3 340 aa12.19□□□□□ -0.46
SHMT2-205ENST00000553474 SNX7Q9UNH6 387 aa12.19□□□□□ -0.46
SHMT2-205ENST00000553474 ENTPD4Q9Y227 616 aa12.19□□□□□ -0.46
SHMT2-205ENST00000553474 ASB4Q9Y574 426 aa12.19□□□□□ -0.46
SHMT2-205ENST00000553474 OR1A2Q9Y585 309 aa12.19□□□□□ -0.46
SHMT2-205ENST00000553474 COLEC10Q9Y6Z7 277 aa12.19□□□□□ -0.46
SHMT2-205ENST00000553474 MN1Q10571 1320 aaPredicted RBP12.19□□□□□ -0.46
SHMT2-205ENST00000553474 SNTNA6NMZ2 147 aa12.18□□□□□ -0.46
SHMT2-205ENST00000553474 SEMA7AO75326 666 aa12.18□□□□□ -0.46
SHMT2-205ENST00000553474 NME6O75414 186 aaPredicted RBP12.18□□□□□ -0.46
SHMT2-205ENST00000553474 MED26O95402 600 aa12.18□□□□□ -0.46
SHMT2-205ENST00000553474 LGI1O95970 557 aa12.18□□□□□ -0.46
SHMT2-205ENST00000553474 CEACAM5P06731 702 aa12.18□□□□□ -0.46
SHMT2-205ENST00000553474 OR12D1P0DN82 309 aa12.18□□□□□ -0.46
SHMT2-205ENST00000553474 ACADMP11310 421 aa12.18□□□□□ -0.46
SHMT2-205ENST00000553474 IMPDH2P12268 514 aa12.18□□□□□ -0.46
SHMT2-205ENST00000553474 CMPK1P30085 196 aa12.18□□□□□ -0.46
SHMT2-205ENST00000553474 MPIP34949 423 aa12.18□□□□□ -0.46
SHMT2-205ENST00000553474 IFNGR2P38484 337 aa12.18□□□□□ -0.46
SHMT2-205ENST00000553474 STXBP1P61764 594 aaKnown RBP12.18□□□□□ -0.46
SHMT2-205ENST00000553474 MED22Q15528 200 aa12.18□□□□□ -0.46
SHMT2-205ENST00000553474 ITPRIPL2Q3MIP1 535 aa12.18□□□□□ -0.46
SHMT2-205ENST00000553474 ENTPD8Q5MY95 495 aa12.18□□□□□ -0.46
SHMT2-205ENST00000553474 MFSD4BQ5TF39 518 aa12.18□□□□□ -0.46
SHMT2-205ENST00000553474 ABHD17CQ6PCB6 329 aa12.18□□□□□ -0.46
SHMT2-205ENST00000553474 DEF8Q6ZN54 512 aa12.18□□□□□ -0.46
SHMT2-205ENST00000553474 MTSS1LQ765P7 747 aa12.18□□□□□ -0.46
SHMT2-205ENST00000553474 RBM12BQ8IXT5 1001 aaKnown RBP12.18□□□□□ -0.46
SHMT2-205ENST00000553474 SAMD14Q8IZD0 417 aaPredicted RBP12.18□□□□□ -0.46
SHMT2-205ENST00000553474 PROKR2Q8NFJ6 384 aa12.18□□□□□ -0.46
SHMT2-205ENST00000553474 SLC7A13Q8TCU3 470 aa12.18□□□□□ -0.46
SHMT2-205ENST00000553474 XAGE5Q8WWM1 108 aa12.18□□□□□ -0.46
SHMT2-205ENST00000553474 NEURL2Q9BR09 285 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms