RNA–Protein interactions for RNA: ENST00000553405.1

MTHFD1-204, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 833 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-204ENST00000553405 SQLEQ14534 574 aa13.8□□□□□ -0.2
MTHFD1-204ENST00000553405 ZNF267Q14586 743 aaPredicted RBP13.8□□□□□ -0.2
MTHFD1-204ENST00000553405 BTBD16Q32M84 506 aa13.8□□□□□ -0.2
MTHFD1-204ENST00000553405 FAM174BQ3ZCQ3 159 aa13.8□□□□□ -0.2
MTHFD1-204ENST00000553405 TRMT12Q53H54 448 aaKnown RBP13.8□□□□□ -0.2
MTHFD1-204ENST00000553405 BORAQ6PGQ7 559 aa13.8□□□□□ -0.2
MTHFD1-204ENST00000553405 BLOC1S3Q6QNY0 202 aa13.8□□□□□ -0.2
MTHFD1-204ENST00000553405 GPR155Q7Z3F1 870 aa13.8□□□□□ -0.2
MTHFD1-204ENST00000553405 C9orf40Q8IXQ3 194 aa13.8□□□□□ -0.2
MTHFD1-204ENST00000553405 OR2L13Q8N349 312 aa13.8□□□□□ -0.2
MTHFD1-204ENST00000553405 NATD1Q8N6N6 113 aa13.8□□□□□ -0.2
MTHFD1-204ENST00000553405 ZNF441Q8N8Z8 693 aa13.8□□□□□ -0.2
MTHFD1-204ENST00000553405 APOBEC4Q8WW27 367 aaKnown RBP13.8□□□□□ -0.2
MTHFD1-204ENST00000553405 KAT2AQ92830 837 aa13.8□□□□□ -0.2
MTHFD1-204ENST00000553405 EXTL1Q92935 676 aa13.8□□□□□ -0.2
MTHFD1-204ENST00000553405 ERP27Q96DN0 273 aa13.8□□□□□ -0.2
MTHFD1-204ENST00000553405 ELP4Q96EB1 424 aa13.8□□□□□ -0.2
MTHFD1-204ENST00000553405 ZBED6CLQ96FA7 236 aaPredicted RBP13.8□□□□□ -0.2
MTHFD1-204ENST00000553405 VMP1Q96GC9 406 aa13.8□□□□□ -0.2
MTHFD1-204ENST00000553405 OR8D2Q9GZM6 311 aa13.8□□□□□ -0.2
MTHFD1-204ENST00000553405 ZNF552Q9H707 407 aaPredicted RBP13.8□□□□□ -0.2
MTHFD1-204ENST00000553405 ANKRA2Q9H9E1 313 aa13.8□□□□□ -0.2
MTHFD1-204ENST00000553405 GIMAP4Q9NUV9 329 aa13.8□□□□□ -0.2
MTHFD1-204ENST00000553405 CHD6Q8TD26 2715 aa13.8□□□□□ -0.2
MTHFD1-204ENST00000553405 KALRNO60229 2985 aa13.79□□□□□ -0.2
MTHFD1-204ENST00000553405 A0A087WV62 115 aa13.79□□□□□ -0.2
MTHFD1-204ENST00000553405 FAM234BA2RU67 622 aa13.79□□□□□ -0.2
MTHFD1-204ENST00000553405 RNASET2O00584 256 aaKnown RBP13.79□□□□□ -0.2
MTHFD1-204ENST00000553405 SLITRK5O94991 958 aa13.79□□□□□ -0.2
MTHFD1-204ENST00000553405 PGRP06401 933 aa13.79□□□□□ -0.2
MTHFD1-204ENST00000553405 ICAM2P13598 275 aa13.79□□□□□ -0.2
MTHFD1-204ENST00000553405 HOXB9P17482 250 aaPredicted RBP13.79□□□□□ -0.2
MTHFD1-204ENST00000553405 TNNI3P19429 210 aa13.79□□□□□ -0.2
MTHFD1-204ENST00000553405 PTPN6P29350 595 aa13.79□□□□□ -0.2
MTHFD1-204ENST00000553405 NTSP30990 170 aa13.79□□□□□ -0.2
MTHFD1-204ENST00000553405 MC3RP41968 323 aa13.79□□□□□ -0.2
MTHFD1-204ENST00000553405 EMDP50402 254 aa13.79□□□□□ -0.2
MTHFD1-204ENST00000553405 PGDP52209 483 aa13.79□□□□□ -0.2
MTHFD1-204ENST00000553405 MYBPC3Q14896 1274 aa13.79□□□□□ -0.2
MTHFD1-204ENST00000553405 EXOSC7Q15024 291 aaKnown RBP13.79□□□□□ -0.2
MTHFD1-204ENST00000553405 PGS1Q32NB8 556 aa13.79□□□□□ -0.2
MTHFD1-204ENST00000553405 EXOSC6Q5RKV6 272 aaKnown RBP13.79□□□□□ -0.2
MTHFD1-204ENST00000553405 JMJD6Q6NYC1 403 aaPredicted RBP13.79□□□□□ -0.2
MTHFD1-204ENST00000553405 CLECL1Q8IZS7 167 aa13.79□□□□□ -0.2
MTHFD1-204ENST00000553405 VWA5B2Q8N398 1253 aa13.79□□□□□ -0.2
MTHFD1-204ENST00000553405 CLEC1AQ8NC01 280 aa13.79□□□□□ -0.2
MTHFD1-204ENST00000553405 FDCSPQ8NFU4 85 aa13.79□□□□□ -0.2
MTHFD1-204ENST00000553405 OR8K3Q8NH51 312 aa13.79□□□□□ -0.2
MTHFD1-204ENST00000553405 BRIX1Q8TDN6 353 aaKnown RBP13.79□□□□□ -0.2
MTHFD1-204ENST00000553405 OR5P2Q8WZ92 322 aa13.79□□□□□ -0.2
MTHFD1-204ENST00000553405 HOXB13Q92826 284 aaPredicted RBP13.79□□□□□ -0.2
MTHFD1-204ENST00000553405 THOC3Q96J01 351 aaKnown RBP13.79□□□□□ -0.2
MTHFD1-204ENST00000553405 RILPQ96NA2 401 aa13.79□□□□□ -0.2
MTHFD1-204ENST00000553405 CCDC115Q96NT0 180 aa13.79□□□□□ -0.2
MTHFD1-204ENST00000553405 CCT8L2Q96SF2 557 aa13.79□□□□□ -0.2
MTHFD1-204ENST00000553405 PRPF18Q99633 342 aaKnown RBP13.79□□□□□ -0.2
MTHFD1-204ENST00000553405 NMUR2Q9GZQ4 415 aa13.79□□□□□ -0.2
MTHFD1-204ENST00000553405 LHPPQ9H008 270 aa13.79□□□□□ -0.2
MTHFD1-204ENST00000553405 FAM107BQ9H098 131 aa13.79□□□□□ -0.2
MTHFD1-204ENST00000553405 MYLK2Q9H1R3 596 aa13.79□□□□□ -0.2
MTHFD1-204ENST00000553405 RABEP2Q9H5N1 569 aa13.79□□□□□ -0.2
MTHFD1-204ENST00000553405 CXorf36Q9H7Y0 433 aa13.79□□□□□ -0.2
MTHFD1-204ENST00000553405 ATAD3AQ9NVI7 634 aa13.79□□□□□ -0.2
MTHFD1-204ENST00000553405 C19orf53Q9UNZ5 99 aaPredicted RBP13.79□□□□□ -0.2
MTHFD1-204ENST00000553405 DTX4Q9Y2E6 619 aa13.79□□□□□ -0.2
MTHFD1-204ENST00000553405 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.78□□□□□ -0.2
MTHFD1-204ENST00000553405 TRBV11-1A0A0K0K1C0 115 aa13.78□□□□□ -0.2
MTHFD1-204ENST00000553405 PRSS51A0A1B0GVH4 220 aa13.78□□□□□ -0.2
MTHFD1-204ENST00000553405 A0A1W2PRB8 838 aa13.78□□□□□ -0.2
MTHFD1-204ENST00000553405 UPK1AO00322 258 aa13.78□□□□□ -0.2
MTHFD1-204ENST00000553405 ZNF354AO60765 605 aaPredicted RBP13.78□□□□□ -0.2
MTHFD1-204ENST00000553405 NME6O75414 186 aaPredicted RBP13.78□□□□□ -0.2
MTHFD1-204ENST00000553405 C6orf47O95873 294 aa13.78□□□□□ -0.2
MTHFD1-204ENST00000553405 FAM107AO95990 144 aa13.78□□□□□ -0.2
MTHFD1-204ENST00000553405 PDGFAP04085 211 aa13.78□□□□□ -0.2
MTHFD1-204ENST00000553405 CAPN3P20807 821 aa13.78□□□□□ -0.2
MTHFD1-204ENST00000553405 S100A3P33764 101 aa13.78□□□□□ -0.2
MTHFD1-204ENST00000553405 POLR2JP52435 117 aaKnown RBP13.78□□□□□ -0.2
MTHFD1-204ENST00000553405 POLE2P56282 527 aa13.78□□□□□ -0.2
MTHFD1-204ENST00000553405 HBA1P69905 142 aa13.78□□□□□ -0.2
MTHFD1-204ENST00000553405 RNF4P78317 190 aa13.78□□□□□ -0.2
MTHFD1-204ENST00000553405 HSPB3Q12988 150 aa13.78□□□□□ -0.2
MTHFD1-204ENST00000553405 UBAP2LQ14157 1087 aaKnown RBP13.78□□□□□ -0.2
MTHFD1-204ENST00000553405 EBPQ15125 230 aaKnown RBP13.78□□□□□ -0.2
MTHFD1-204ENST00000553405 RPS6KA2Q15349 733 aa13.78□□□□□ -0.2
MTHFD1-204ENST00000553405 TLR1Q15399 786 aa13.78□□□□□ -0.2
MTHFD1-204ENST00000553405 IGFL2Q6UWQ7 119 aa13.78□□□□□ -0.2
MTHFD1-204ENST00000553405 TMEM107Q6UX40 140 aa13.78□□□□□ -0.2
MTHFD1-204ENST00000553405 CPLX4Q7Z7G2 160 aa13.78□□□□□ -0.2
MTHFD1-204ENST00000553405 OR7G1Q8NGA0 311 aa13.78□□□□□ -0.2
MTHFD1-204ENST00000553405 GOT1L1Q8NHS2 421 aaPredicted RBP13.78□□□□□ -0.2
MTHFD1-204ENST00000553405 C16orf52Q8NHV5 167 aa13.78□□□□□ -0.2
MTHFD1-204ENST00000553405 GIMAP5Q96F15 307 aa13.78□□□□□ -0.2
MTHFD1-204ENST00000553405 CNPPD1Q9BV87 410 aa13.78□□□□□ -0.2
MTHFD1-204ENST00000553405 NSRP1Q9H0G5 558 aaKnown RBP13.78□□□□□ -0.2
MTHFD1-204ENST00000553405 OR10A5Q9H207 317 aa13.78□□□□□ -0.2
MTHFD1-204ENST00000553405 ZBTB20Q9HC78 741 aaPredicted RBP13.78□□□□□ -0.2
MTHFD1-204ENST00000553405 FAM120CQ9NX05 1096 aaKnown RBP13.78□□□□□ -0.2
MTHFD1-204ENST00000553405 BTNL2Q9UIR0 455 aa13.78□□□□□ -0.2
MTHFD1-204ENST00000553405 TRIM33Q9UPN9 1127 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 117.4 ms