RNA–Protein interactions for RNA: ENST00000553370.5

ACTN1-208, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 605 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-208ENST00000553370 HYAL4Q2M3T9 481 aa9.11□□□□□ -0.95
ACTN1-208ENST00000553370 ZNF791Q3KP31 576 aaPredicted RBP9.11□□□□□ -0.95
ACTN1-208ENST00000553370 DEPDC1Q5TB30 811 aa9.11□□□□□ -0.95
ACTN1-208ENST00000553370 GRTP1Q5TC63 336 aa9.11□□□□□ -0.95
ACTN1-208ENST00000553370 C18orf63Q68DL7 685 aa9.11□□□□□ -0.95
ACTN1-208ENST00000553370 TTC19Q6DKK2 380 aaPredicted RBP9.11□□□□□ -0.95
ACTN1-208ENST00000553370 OR52E8Q6IFG1 317 aa9.11□□□□□ -0.95
ACTN1-208ENST00000553370 C3orf62Q6ZUJ4 267 aa9.11□□□□□ -0.95
ACTN1-208ENST00000553370 MAATS1Q7Z4T9 603 aa9.11□□□□□ -0.95
ACTN1-208ENST00000553370 UBE3DQ7Z6J8 389 aa9.11□□□□□ -0.95
ACTN1-208ENST00000553370 NUDT13Q86X67 352 aa9.11□□□□□ -0.95
ACTN1-208ENST00000553370 KIF18BQ86Y91 864 aa9.11□□□□□ -0.95
ACTN1-208ENST00000553370 TGIF2LYQ8IUE0 185 aa9.11□□□□□ -0.95
ACTN1-208ENST00000553370 LACC1Q8IV20 430 aa9.11□□□□□ -0.95
ACTN1-208ENST00000553370 LAS2Q8IYD9 372 aa9.11□□□□□ -0.95
ACTN1-208ENST00000553370 PM20D2Q8IYS1 436 aa9.11□□□□□ -0.95
ACTN1-208ENST00000553370 RNF175Q8N4F7 328 aa9.11□□□□□ -0.95
ACTN1-208ENST00000553370 PAQR8Q8TEZ7 354 aa9.11□□□□□ -0.95
ACTN1-208ENST00000553370 ANP32BQ92688 251 aaKnown RBP9.11□□□□□ -0.95
ACTN1-208ENST00000553370 TRIB1Q96RU8 372 aa9.11□□□□□ -0.95
ACTN1-208ENST00000553370 FOXC2Q99958 501 aa9.11□□□□□ -0.95
ACTN1-208ENST00000553370 YIPF4Q9BSR8 244 aa9.11□□□□□ -0.95
ACTN1-208ENST00000553370 METTL7AQ9H8H3 244 aa9.11□□□□□ -0.95
ACTN1-208ENST00000553370 DMRT3Q9NQL9 472 aa9.11□□□□□ -0.95
ACTN1-208ENST00000553370 SNX15Q9NRS6 342 aa9.11□□□□□ -0.95
ACTN1-208ENST00000553370 QPCTLQ9NXS2 382 aa9.11□□□□□ -0.95
ACTN1-208ENST00000553370 CRIM1Q9NZV1 1036 aa9.11□□□□□ -0.95
ACTN1-208ENST00000553370 CPSF2Q9P2I0 782 aaKnown RBP9.11□□□□□ -0.95
ACTN1-208ENST00000553370 NSD1Q96L73 2696 aaPredicted RBP9.11□□□□□ -0.95
ACTN1-208ENST00000553370 DSCAMO60469 2012 aa9.1□□□□□ -0.95
ACTN1-208ENST00000553370 TUBAL3A6NHL2 446 aa9.1□□□□□ -0.95
ACTN1-208ENST00000553370 A6NNC1 897 aa9.1□□□□□ -0.95
ACTN1-208ENST00000553370 PLPP1O14494 284 aa9.1□□□□□ -0.95
ACTN1-208ENST00000553370 PRAMEF4O60810 478 aa9.1□□□□□ -0.95
ACTN1-208ENST00000553370 CTAG2O75638 210 aa9.1□□□□□ -0.95
ACTN1-208ENST00000553370 GPR75O95800 540 aa9.1□□□□□ -0.95
ACTN1-208ENST00000553370 GSTA2P09210 222 aa9.1□□□□□ -0.95
ACTN1-208ENST00000553370 RFPL3SP0C7P2 107 aa9.1□□□□□ -0.95
ACTN1-208ENST00000553370 KLK2P20151 261 aa9.1□□□□□ -0.95
ACTN1-208ENST00000553370 ENDOUP21128 410 aaKnown RBP9.1□□□□□ -0.95
ACTN1-208ENST00000553370 NT5EP21589 574 aa9.1□□□□□ -0.95
ACTN1-208ENST00000553370 PIK3CBP42338 1070 aa9.1□□□□□ -0.95
ACTN1-208ENST00000553370 CASP2P42575 452 aa9.1□□□□□ -0.95
ACTN1-208ENST00000553370 PIK3CGP48736 1102 aa9.1□□□□□ -0.95
ACTN1-208ENST00000553370 HNRNPH2P55795 449 aaKnown RBP9.1□□□□□ -0.95
ACTN1-208ENST00000553370 DLX5P56178 289 aa9.1□□□□□ -0.95
ACTN1-208ENST00000553370 FBXW4P57775 412 aa9.1□□□□□ -0.95
ACTN1-208ENST00000553370 RPS13P62277 151 aaKnown RBP9.1□□□□□ -0.95
ACTN1-208ENST00000553370 IGLV3-21P80748 117 aaPredicted RBP9.1□□□□□ -0.95
ACTN1-208ENST00000553370 DUSP8Q13202 625 aa9.1□□□□□ -0.95
ACTN1-208ENST00000553370 KEAP1Q14145 624 aa9.1□□□□□ -0.95
ACTN1-208ENST00000553370 RCAN2Q14206 197 aa9.1□□□□□ -0.95
ACTN1-208ENST00000553370 CPSF6Q16630 551 aaKnown RBP eCLIP9.1□□□□□ -0.95
ACTN1-208ENST00000553370 FAM83EQ2M2I3 478 aa9.1□□□□□ -0.95
ACTN1-208ENST00000553370 SPRED3Q2MJR0 410 aa9.1□□□□□ -0.95
ACTN1-208ENST00000553370 KBTBD12Q3ZCT8 623 aa9.1□□□□□ -0.95
ACTN1-208ENST00000553370 ACSF3Q4G176 576 aaPredicted RBP9.1□□□□□ -0.95
ACTN1-208ENST00000553370 SAMD5Q5TGI4 173 aa9.1□□□□□ -0.95
ACTN1-208ENST00000553370 PRAMEF9Q5VWM5 478 aa9.1□□□□□ -0.95
ACTN1-208ENST00000553370 CREG2Q8IUH2 290 aa9.1□□□□□ -0.95
ACTN1-208ENST00000553370 LIX1LQ8IVB5 337 aa9.1□□□□□ -0.95
ACTN1-208ENST00000553370 LRRC25Q8N386 305 aaPredicted RBP9.1□□□□□ -0.95
ACTN1-208ENST00000553370 FAM222BQ8WU58 562 aa9.1□□□□□ -0.95
ACTN1-208ENST00000553370 UBTD2Q8WUN7 234 aa9.1□□□□□ -0.95
ACTN1-208ENST00000553370 RNASE6Q93091 150 aaKnown RBP9.1□□□□□ -0.95
ACTN1-208ENST00000553370 RILPQ96NA2 401 aa9.1□□□□□ -0.95
ACTN1-208ENST00000553370 TEX10Q9NXF1 929 aaPredicted RBP9.1□□□□□ -0.95
ACTN1-208ENST00000553370 WHRNQ9P202 907 aa9.1□□□□□ -0.95
ACTN1-208ENST00000553370 ACOT9Q9Y305 439 aa9.1□□□□□ -0.95
ACTN1-208ENST00000553370 UTP11Q9Y3A2 253 aaKnown RBP9.1□□□□□ -0.95
ACTN1-208ENST00000553370 JMJD1CQ15652 2540 aa9.09□□□□□ -0.95
ACTN1-208ENST00000553370 A0A087X1B8 175 aa9.09□□□□□ -0.95
ACTN1-208ENST00000553370 FAM187AA6NFU0 413 aa9.09□□□□□ -0.95
ACTN1-208ENST00000553370 LRRC3CA6NJW4 275 aa9.09□□□□□ -0.95
ACTN1-208ENST00000553370 FAM159BA6NKW6 160 aa9.09□□□□□ -0.95
ACTN1-208ENST00000553370 AHRRA9YTQ3 701 aa9.09□□□□□ -0.95
ACTN1-208ENST00000553370 H0Y3Z8 333 aa9.09□□□□□ -0.95
ACTN1-208ENST00000553370 GNB5O14775 395 aa9.09□□□□□ -0.95
ACTN1-208ENST00000553370 ERN1O75460 977 aaKnown RBP9.09□□□□□ -0.95
ACTN1-208ENST00000553370 EEDO75530 441 aaKnown RBP9.09□□□□□ -0.95
ACTN1-208ENST00000553370 SNX4O95219 450 aa9.09□□□□□ -0.95
ACTN1-208ENST00000553370 AIFM1O95831 613 aa9.09□□□□□ -0.95
ACTN1-208ENST00000553370 IGKV3-11P04433 115 aa9.09□□□□□ -0.95
ACTN1-208ENST00000553370 FAM58BPP0C7Q3 252 aa9.09□□□□□ -0.95
ACTN1-208ENST00000553370 SLC35E2BP0CK96 405 aa9.09□□□□□ -0.95
ACTN1-208ENST00000553370 EPORP19235 508 aa9.09□□□□□ -0.95
ACTN1-208ENST00000553370 SSTR4P31391 388 aa9.09□□□□□ -0.95
ACTN1-208ENST00000553370 DEKP35659 375 aaKnown RBP9.09□□□□□ -0.95
ACTN1-208ENST00000553370 GMPRP36959 345 aa9.09□□□□□ -0.95
ACTN1-208ENST00000553370 PLTPP55058 493 aa9.09□□□□□ -0.95
ACTN1-208ENST00000553370 WNT3P56703 355 aa9.09□□□□□ -0.95
ACTN1-208ENST00000553370 SLC37A1P57057 533 aa9.09□□□□□ -0.95
ACTN1-208ENST00000553370 NAB1Q13506 487 aa9.09□□□□□ -0.95
ACTN1-208ENST00000553370 GTF2H2Q13888 395 aa9.09□□□□□ -0.95
ACTN1-208ENST00000553370 EBPQ15125 230 aaKnown RBP9.09□□□□□ -0.95
ACTN1-208ENST00000553370 ZKSCAN8Q15776 578 aaPredicted RBP9.09□□□□□ -0.95
ACTN1-208ENST00000553370 NNATQ16517 81 aa9.09□□□□□ -0.95
ACTN1-208ENST00000553370 NTRK2Q16620 822 aa9.09□□□□□ -0.95
ACTN1-208ENST00000553370 PFKFB4Q16877 469 aa9.09□□□□□ -0.95
ACTN1-208ENST00000553370 LIPJQ5W064 366 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms