RNA–Protein interactions for RNA: ENST00000553308.1

SYNE2-209, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 4

Gene SYNE2, Length 557 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-209ENST00000553308 CDKL4Q5MAI5 379 aa8.27□□□□□ -1.09
SYNE2-209ENST00000553308 DEPDC1Q5TB30 811 aa8.27□□□□□ -1.09
SYNE2-209ENST00000553308 TIGD3Q6B0B8 471 aa8.27□□□□□ -1.09
SYNE2-209ENST00000553308 DESI1Q6ICB0 168 aa8.27□□□□□ -1.09
SYNE2-209ENST00000553308 ANGPTL8Q6UXH0 198 aa8.27□□□□□ -1.09
SYNE2-209ENST00000553308 CAPN12Q6ZSI9 719 aa8.27□□□□□ -1.09
SYNE2-209ENST00000553308 LRRC70Q7Z2Q7 622 aa8.27□□□□□ -1.09
SYNE2-209ENST00000553308 ZCCHC7Q8N3Z6 543 aaKnown RBP8.27□□□□□ -1.09
SYNE2-209ENST00000553308 OR7G3Q8NG95 312 aa8.27□□□□□ -1.09
SYNE2-209ENST00000553308 ZPLD1Q8TCW7 415 aa8.27□□□□□ -1.09
SYNE2-209ENST00000553308 NANOS1Q8WY41 292 aaKnown RBP8.27□□□□□ -1.09
SYNE2-209ENST00000553308 PIGTQ969N2 578 aa8.27□□□□□ -1.09
SYNE2-209ENST00000553308 UBE2E3Q969T4 207 aa8.27□□□□□ -1.09
SYNE2-209ENST00000553308 ADIPOR1Q96A54 375 aa8.27□□□□□ -1.09
SYNE2-209ENST00000553308 NTNG2Q96CW9 530 aa8.27□□□□□ -1.09
SYNE2-209ENST00000553308 CMTM7Q96FZ5 175 aa8.27□□□□□ -1.09
SYNE2-209ENST00000553308 TMEM41AQ96HV5 264 aa8.27□□□□□ -1.09
SYNE2-209ENST00000553308 SECISBP2Q96T21 854 aaKnown RBP8.27□□□□□ -1.09
SYNE2-209ENST00000553308 CCL19Q99731 98 aa8.27□□□□□ -1.09
SYNE2-209ENST00000553308 G6PC3Q9BUM1 346 aa8.27□□□□□ -1.09
SYNE2-209ENST00000553308 ZNF717Q9BY31 904 aaPredicted RBP8.27□□□□□ -1.09
SYNE2-209ENST00000553308 UBTD1Q9HAC8 227 aa8.27□□□□□ -1.09
SYNE2-209ENST00000553308 SMYD2Q9NRG4 433 aa8.27□□□□□ -1.09
SYNE2-209ENST00000553308 SNX15Q9NRS6 342 aa8.27□□□□□ -1.09
SYNE2-209ENST00000553308 RYDENQ9NUL5 291 aaKnown RBP8.27□□□□□ -1.09
SYNE2-209ENST00000553308 CLCF1Q9UBD9 225 aa8.27□□□□□ -1.09
SYNE2-209ENST00000553308 TRPS1Q9UHF7 1281 aa8.27□□□□□ -1.09
SYNE2-209ENST00000553308 MTO1Q9Y2Z2 717 aaKnown RBP8.27□□□□□ -1.09
SYNE2-209ENST00000553308 MED12Q93074 2177 aa8.27□□□□□ -1.09
SYNE2-209ENST00000553308 A0A0A6YYD5 115 aa8.26□□□□□ -1.09
SYNE2-209ENST00000553308 A0A1W2PR48 441 aa8.26□□□□□ -1.09
SYNE2-209ENST00000553308 C2orf72A6NCS6 295 aa8.26□□□□□ -1.09
SYNE2-209ENST00000553308 CAPN14A8MX76 684 aa8.26□□□□□ -1.09
SYNE2-209ENST00000553308 CES2O00748 559 aa8.26□□□□□ -1.09
SYNE2-209ENST00000553308 SNPHO15079 494 aa8.26□□□□□ -1.09
SYNE2-209ENST00000553308 CTIFO43310 598 aaKnown RBP8.26□□□□□ -1.09
SYNE2-209ENST00000553308 EEDO75530 441 aaKnown RBP8.26□□□□□ -1.09
SYNE2-209ENST00000553308 RCBTB2O95199 551 aa8.26□□□□□ -1.09
SYNE2-209ENST00000553308 AIFM1O95831 613 aa8.26□□□□□ -1.09
SYNE2-209ENST00000553308 ACTL6AO96019 429 aa8.26□□□□□ -1.09
SYNE2-209ENST00000553308 S100BP04271 92 aaPredicted RBP8.26□□□□□ -1.09
SYNE2-209ENST00000553308 NR2F6P10588 404 aa8.26□□□□□ -1.09
SYNE2-209ENST00000553308 CPN1P15169 458 aa8.26□□□□□ -1.09
SYNE2-209ENST00000553308 SERPINB1P30740 379 aa8.26□□□□□ -1.09
SYNE2-209ENST00000553308 SLC12A2P55011 1212 aa8.26□□□□□ -1.09
SYNE2-209ENST00000553308 POU4F1Q01851 419 aa8.26□□□□□ -1.09
SYNE2-209ENST00000553308 PCDH1Q08174 1060 aa8.26□□□□□ -1.09
SYNE2-209ENST00000553308 MORF4L2Q15014 288 aa8.26□□□□□ -1.09
SYNE2-209ENST00000553308 SETDB1Q15047 1291 aa8.26□□□□□ -1.09
SYNE2-209ENST00000553308 NNATQ16517 81 aa8.26□□□□□ -1.09
SYNE2-209ENST00000553308 HLA-DQA1Q5Y7H0 255 aa8.26□□□□□ -1.09
SYNE2-209ENST00000553308 MRM1Q6IN84 353 aaKnown RBP8.26□□□□□ -1.09
SYNE2-209ENST00000553308 GRHL2Q6ISB3 625 aa8.26□□□□□ -1.09
SYNE2-209ENST00000553308 PRSS57Q6UWY2 283 aa8.26□□□□□ -1.09
SYNE2-209ENST00000553308 ADGRE4PQ86SQ3 457 aa8.26□□□□□ -1.09
SYNE2-209ENST00000553308 FBXO36Q8NEA4 188 aa8.26□□□□□ -1.09
SYNE2-209ENST00000553308 OR1J4Q8NGS1 313 aa8.26□□□□□ -1.09
SYNE2-209ENST00000553308 HUS1BQ8NHY5 278 aa8.26□□□□□ -1.09
SYNE2-209ENST00000553308 PPP1R14CQ8TAE6 165 aa8.26□□□□□ -1.09
SYNE2-209ENST00000553308 RDH11Q8TC12 318 aa8.26□□□□□ -1.09
SYNE2-209ENST00000553308 ACTRT1Q8TDG2 376 aa8.26□□□□□ -1.09
SYNE2-209ENST00000553308 TP53INP1Q96A56 240 aa8.26□□□□□ -1.09
SYNE2-209ENST00000553308 RGMAQ96B86 450 aa8.26□□□□□ -1.09
SYNE2-209ENST00000553308 LRRC39Q96DD0 335 aa8.26□□□□□ -1.09
SYNE2-209ENST00000553308 PIK3IP1Q96FE7 263 aa8.26□□□□□ -1.09
SYNE2-209ENST00000553308 ZFP3Q96NJ6 502 aa8.26□□□□□ -1.09
SYNE2-209ENST00000553308 WFIKKN1Q96NZ8 548 aa8.26□□□□□ -1.09
SYNE2-209ENST00000553308 OSBPL9Q96SU4 736 aa8.26□□□□□ -1.09
SYNE2-209ENST00000553308 MTERF1Q99551 399 aaKnown RBP8.26□□□□□ -1.09
SYNE2-209ENST00000553308 TM9SF2Q99805 663 aa8.26□□□□□ -1.09
SYNE2-209ENST00000553308 PIGQQ9BRB3 760 aa8.26□□□□□ -1.09
SYNE2-209ENST00000553308 CD244Q9BZW8 370 aa8.26□□□□□ -1.09
SYNE2-209ENST00000553308 METTL7AQ9H8H3 244 aa8.26□□□□□ -1.09
SYNE2-209ENST00000553308 CXorf21Q9HAI6 301 aa8.26□□□□□ -1.09
SYNE2-209ENST00000553308 GALNT9Q9HCQ5 603 aa8.26□□□□□ -1.09
SYNE2-209ENST00000553308 SERHLQ9NQF3 203 aa8.26□□□□□ -1.09
SYNE2-209ENST00000553308 KLHL28Q9NXS3 571 aa8.26□□□□□ -1.09
SYNE2-209ENST00000553308 MOCS1Q9NZB8 636 aa8.26□□□□□ -1.09
SYNE2-209ENST00000553308 FETUBQ9UGM5 382 aa8.26□□□□□ -1.09
SYNE2-209ENST00000553308 NDRG3Q9UGV2 375 aa8.26□□□□□ -1.09
SYNE2-209ENST00000553308 PACSIN3Q9UKS6 424 aa8.26□□□□□ -1.09
SYNE2-209ENST00000553308 RNF112Q9ULX5 631 aa8.26□□□□□ -1.09
SYNE2-209ENST00000553308 MAPRE3Q9UPY8 281 aa8.26□□□□□ -1.09
SYNE2-209ENST00000553308 DTX4Q9Y2E6 619 aa8.26□□□□□ -1.09
SYNE2-209ENST00000553308 JRKLQ9Y4A0 524 aa8.26□□□□□ -1.09
SYNE2-209ENST00000553308 ASB4Q9Y574 426 aa8.26□□□□□ -1.09
SYNE2-209ENST00000553308 WIF1Q9Y5W5 379 aa8.26□□□□□ -1.09
SYNE2-209ENST00000553308 CSPG4Q6UVK1 2322 aa8.26□□□□□ -1.09
SYNE2-209ENST00000553308 RAI1Q7Z5J4 1906 aaPredicted RBP8.25□□□□□ -1.09
SYNE2-209ENST00000553308 TNFSF12-TNFSF13A0A0A6YY99 330 aa8.25□□□□□ -1.09
SYNE2-209ENST00000553308 A8MXE2 369 aa8.25□□□□□ -1.09
SYNE2-209ENST00000553308 TNFSF13O75888 250 aa8.25□□□□□ -1.09
SYNE2-209ENST00000553308 ABCB1P08183 1280 aaPredicted RBP8.25□□□□□ -1.09
SYNE2-209ENST00000553308 FAM58BPP0C7Q3 252 aa8.25□□□□□ -1.09
SYNE2-209ENST00000553308 SLC35E2BP0CK96 405 aa8.25□□□□□ -1.09
SYNE2-209ENST00000553308 SLC35E2P0CK97 266 aa8.25□□□□□ -1.09
SYNE2-209ENST00000553308 ABCD3P28288 659 aa8.25□□□□□ -1.09
SYNE2-209ENST00000553308 CCKARP32238 428 aa8.25□□□□□ -1.09
SYNE2-209ENST00000553308 GALNSP34059 522 aa8.25□□□□□ -1.09
SYNE2-209ENST00000553308 BSGP35613 385 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms