RNA–Protein interactions for RNA: ENST00000553278.1

SCFD1-208, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 795 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-208ENST00000553278 SLC25A19Q9HC21 320 aa5.06□□□□□ -1.6
SCFD1-208ENST00000553278 TAAR2Q9P1P5 351 aa5.06□□□□□ -1.6
SCFD1-208ENST00000553278 AP4B1Q9Y6B7 739 aa5.06□□□□□ -1.6
SCFD1-208ENST00000553278 PPIAL4CA0A0B4J2A2 164 aa5.05□□□□□ -1.6
SCFD1-208ENST00000553278 TTC26A0AVF1 554 aa5.05□□□□□ -1.6
SCFD1-208ENST00000553278 PLSCR5A0PG75 271 aa5.05□□□□□ -1.6
SCFD1-208ENST00000553278 ASB14A6NK59 587 aa5.05□□□□□ -1.6
SCFD1-208ENST00000553278 WASHC1A8K0Z3 465 aa5.05□□□□□ -1.6
SCFD1-208ENST00000553278 E9PBE3 544 aa5.05□□□□□ -1.6
SCFD1-208ENST00000553278 ANHXE9PGG2 379 aa5.05□□□□□ -1.6
SCFD1-208ENST00000553278 CASQ2O14958 399 aaPredicted RBP5.05□□□□□ -1.6
SCFD1-208ENST00000553278 ALOX15BO15296 676 aa5.05□□□□□ -1.6
SCFD1-208ENST00000553278 SLPIP03973 132 aa5.05□□□□□ -1.6
SCFD1-208ENST00000553278 PPIAL4GP0DN37 164 aa5.05□□□□□ -1.6
SCFD1-208ENST00000553278 NCF2P19878 526 aaPredicted RBP5.05□□□□□ -1.6
SCFD1-208ENST00000553278 SOX3P41225 446 aa5.05□□□□□ -1.6
SCFD1-208ENST00000553278 HTR5AP47898 357 aa5.05□□□□□ -1.6
SCFD1-208ENST00000553278 NOP14P78316 857 aaKnown RBP5.05□□□□□ -1.6
SCFD1-208ENST00000553278 MRPS6P82932 125 aaKnown RBP5.05□□□□□ -1.6
SCFD1-208ENST00000553278 HYAL1Q12794 435 aa5.05□□□□□ -1.6
SCFD1-208ENST00000553278 MXD4Q14582 209 aaPredicted RBP5.05□□□□□ -1.6
SCFD1-208ENST00000553278 WDR38Q5JTN6 314 aa5.05□□□□□ -1.6
SCFD1-208ENST00000553278 DMKNQ6E0U4 476 aaPredicted RBP5.05□□□□□ -1.6
SCFD1-208ENST00000553278 FOXL2NBQ6ZUU3 175 aa5.05□□□□□ -1.6
SCFD1-208ENST00000553278 C16orf62Q7Z3J2 963 aa5.05□□□□□ -1.6
SCFD1-208ENST00000553278 GPR142Q7Z601 462 aa5.05□□□□□ -1.6
SCFD1-208ENST00000553278 ZNF683Q8IZ20 524 aa5.05□□□□□ -1.6
SCFD1-208ENST00000553278 BBS5Q8N3I7 341 aa5.05□□□□□ -1.6
SCFD1-208ENST00000553278 ANKFN1Q8N957 763 aa5.05□□□□□ -1.6
SCFD1-208ENST00000553278 SLC16A11Q8NCK7 471 aa5.05□□□□□ -1.6
SCFD1-208ENST00000553278 ICA1LQ8NDH6 482 aa5.05□□□□□ -1.6
SCFD1-208ENST00000553278 NFAM1Q8NET5 270 aaPredicted RBP5.05□□□□□ -1.6
SCFD1-208ENST00000553278 OR5T2Q8NGG2 359 aa5.05□□□□□ -1.6
SCFD1-208ENST00000553278 OR8J1Q8NGP2 316 aa5.05□□□□□ -1.6
SCFD1-208ENST00000553278 GATAD1Q8WUU5 269 aa5.05□□□□□ -1.6
SCFD1-208ENST00000553278 CD101Q93033 1021 aa5.05□□□□□ -1.6
SCFD1-208ENST00000553278 NT5C3BQ969T7 300 aa5.05□□□□□ -1.6
SCFD1-208ENST00000553278 AKR1E2Q96JD6 320 aa5.05□□□□□ -1.6
SCFD1-208ENST00000553278 C2orf48Q96LS8 159 aa5.05□□□□□ -1.6
SCFD1-208ENST00000553278 FCRL4Q96PJ5 515 aa5.05□□□□□ -1.6
SCFD1-208ENST00000553278 ZPBPQ9BS86 351 aa5.05□□□□□ -1.6
SCFD1-208ENST00000553278 FN3KRPQ9HA64 309 aa5.05□□□□□ -1.6
SCFD1-208ENST00000553278 SIX2Q9NPC8 291 aa5.05□□□□□ -1.6
SCFD1-208ENST00000553278 MAN2C1Q9NTJ4 1040 aa5.05□□□□□ -1.6
SCFD1-208ENST00000553278 C1orf123Q9NWV4 160 aa5.05□□□□□ -1.6
SCFD1-208ENST00000553278 TEX10Q9NXF1 929 aaPredicted RBP5.05□□□□□ -1.6
SCFD1-208ENST00000553278 TUBGCP4Q9UGJ1 667 aa5.05□□□□□ -1.6
SCFD1-208ENST00000553278 IKZF3Q9UKT9 509 aa5.05□□□□□ -1.6
SCFD1-208ENST00000553278 ZNF346Q9UL40 294 aaKnown RBP5.05□□□□□ -1.6
SCFD1-208ENST00000553278 RNF6Q9Y252 685 aa5.05□□□□□ -1.6
SCFD1-208ENST00000553278 RNF115Q9Y4L5 304 aa5.05□□□□□ -1.6
SCFD1-208ENST00000553278 LRP12Q9Y561 859 aa5.05□□□□□ -1.6
SCFD1-208ENST00000553278 RNF215Q9Y6U7 377 aa5.05□□□□□ -1.6
SCFD1-208ENST00000553278 CCDC7Q96M83 1385 aa5.04□□□□□ -1.6
SCFD1-208ENST00000553278 GIMAP1-GIMAP5A0A087WTJ2 511 aa5.04□□□□□ -1.6
SCFD1-208ENST00000553278 A0A0U1RQS6 177 aa5.04□□□□□ -1.6
SCFD1-208ENST00000553278 LRRC30A6NM36 301 aa5.04□□□□□ -1.6
SCFD1-208ENST00000553278 TMCO5BA8MYB1 307 aa5.04□□□□□ -1.6
SCFD1-208ENST00000553278 H0YL77 283 aa5.04□□□□□ -1.6
SCFD1-208ENST00000553278 SURF4O15260 269 aa5.04□□□□□ -1.6
SCFD1-208ENST00000553278 CTAGE5O15320 804 aa5.04□□□□□ -1.6
SCFD1-208ENST00000553278 OR1F1O43749 312 aa5.04□□□□□ -1.6
SCFD1-208ENST00000553278 CIDEAO60543 219 aa5.04□□□□□ -1.6
SCFD1-208ENST00000553278 NXPH2O95156 264 aa5.04□□□□□ -1.6
SCFD1-208ENST00000553278 SERPINA3P01011 423 aa5.04□□□□□ -1.6
SCFD1-208ENST00000553278 ATP1A1P05023 1023 aaKnown RBP5.04□□□□□ -1.6
SCFD1-208ENST00000553278 MAT2AP31153 395 aaKnown RBP5.04□□□□□ -1.6
SCFD1-208ENST00000553278 DCTP40126 519 aa5.04□□□□□ -1.6
SCFD1-208ENST00000553278 ART1P52961 327 aa5.04□□□□□ -1.6
SCFD1-208ENST00000553278 RPL27P61353 136 aaKnown RBP5.04□□□□□ -1.6
SCFD1-208ENST00000553278 TAB1Q15750 504 aa5.04□□□□□ -1.6
SCFD1-208ENST00000553278 CCDC6Q16204 474 aa5.04□□□□□ -1.6
SCFD1-208ENST00000553278 CDKN3Q16667 212 aa5.04□□□□□ -1.6
SCFD1-208ENST00000553278 LINC01620Q4KN68 170 aa5.04□□□□□ -1.6
SCFD1-208ENST00000553278 TCHHL1Q5QJ38 904 aaPredicted RBP5.04□□□□□ -1.6
SCFD1-208ENST00000553278 TMEM225Q6GV28 225 aa5.04□□□□□ -1.6
SCFD1-208ENST00000553278 ZNF790Q6PG37 636 aa5.04□□□□□ -1.6
SCFD1-208ENST00000553278 RBMS3Q6XE24 437 aaKnown RBP5.04□□□□□ -1.6
SCFD1-208ENST00000553278 SYT10Q6XYQ8 523 aa5.04□□□□□ -1.6
SCFD1-208ENST00000553278 C16orf82Q7Z2V1 217 aa5.04□□□□□ -1.6
SCFD1-208ENST00000553278 NET1Q7Z628 596 aaPredicted RBP5.04□□□□□ -1.6
SCFD1-208ENST00000553278 SPATA2LQ8IUW3 424 aaPredicted RBP5.04□□□□□ -1.6
SCFD1-208ENST00000553278 SLC22A15Q8IZD6 547 aa5.04□□□□□ -1.6
SCFD1-208ENST00000553278 KBTBD3Q8NAB2 608 aa5.04□□□□□ -1.6
SCFD1-208ENST00000553278 RELL2Q8NC24 303 aaPredicted RBP5.04□□□□□ -1.6
SCFD1-208ENST00000553278 OR10G8Q8NGN5 311 aa5.04□□□□□ -1.6
SCFD1-208ENST00000553278 OR5M9Q8NGP3 310 aa5.04□□□□□ -1.6
SCFD1-208ENST00000553278 TM9SF4Q92544 642 aa5.04□□□□□ -1.6
SCFD1-208ENST00000553278 GIMAP5Q96F15 307 aa5.04□□□□□ -1.6
SCFD1-208ENST00000553278 TCEANC2Q96MN5 208 aa5.04□□□□□ -1.6
SCFD1-208ENST00000553278 OMDQ99983 421 aa5.04□□□□□ -1.6
SCFD1-208ENST00000553278 SLC39A3Q9BRY0 314 aa5.04□□□□□ -1.6
SCFD1-208ENST00000553278 C1QTNF4Q9BXJ3 329 aa5.04□□□□□ -1.6
SCFD1-208ENST00000553278 NFKBIZQ9BYH8 718 aa5.04□□□□□ -1.6
SCFD1-208ENST00000553278 ATP13A3Q9H7F0 1226 aa5.04□□□□□ -1.6
SCFD1-208ENST00000553278 DDX31Q9H8H2 851 aaKnown RBP5.04□□□□□ -1.6
SCFD1-208ENST00000553278 ELOVL3Q9HB03 270 aa5.04□□□□□ -1.6
SCFD1-208ENST00000553278 STARD5Q9NSY2 213 aa5.04□□□□□ -1.6
SCFD1-208ENST00000553278 GPR83Q9NYM4 423 aa5.04□□□□□ -1.6
SCFD1-208ENST00000553278 GHRLQ9UBU3 117 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms