RNA–Protein interactions for RNA: ENST00000553186.5

RBFOX1-215, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-215ENST00000553186 MMABQ96EY8 250 aaPredicted RBP18.34■□□□□ 0.53
RBFOX1-215ENST00000553186 OTUB1Q96FW1 271 aaPredicted RBP18.34■□□□□ 0.53
RBFOX1-215ENST00000553186 PEX11GQ96HA9 241 aa18.34■□□□□ 0.53
RBFOX1-215ENST00000553186 RBCK1Q9BYM8 510 aa18.34■□□□□ 0.53
RBFOX1-215ENST00000553186 CUTCQ9NTM9 273 aa18.34■□□□□ 0.53
RBFOX1-215ENST00000553186 DDX18Q9NVP1 670 aaKnown RBP18.34■□□□□ 0.53
RBFOX1-215ENST00000553186 P2RX2Q9UBL9 471 aa18.34■□□□□ 0.53
RBFOX1-215ENST00000553186 CPNE6O95741 557 aa18.33■□□□□ 0.52
RBFOX1-215ENST00000553186 ZNF23P17027 643 aa18.33■□□□□ 0.52
RBFOX1-215ENST00000553186 IST1P53990 364 aa18.33■□□□□ 0.52
RBFOX1-215ENST00000553186 FUT5Q11128 374 aa18.33■□□□□ 0.52
RBFOX1-215ENST00000553186 SYPL1Q16563 259 aa18.33■□□□□ 0.52
RBFOX1-215ENST00000553186 PROX2Q3B8N5 592 aa18.33■□□□□ 0.52
RBFOX1-215ENST00000553186 FHL5Q5TD97 284 aa18.33■□□□□ 0.52
RBFOX1-215ENST00000553186 TBPL2Q6SJ96 375 aa18.33■□□□□ 0.52
RBFOX1-215ENST00000553186 PIWIL3Q7Z3Z3 882 aaKnown RBP18.33■□□□□ 0.52
RBFOX1-215ENST00000553186 LGI4Q8N135 537 aa18.33■□□□□ 0.52
RBFOX1-215ENST00000553186 METTL27Q8N6F8 245 aaPredicted RBP18.33■□□□□ 0.52
RBFOX1-215ENST00000553186 GTPBP2Q9BX10 602 aaKnown RBP18.33■□□□□ 0.52
RBFOX1-215ENST00000553186 PTGFRNQ9P2B2 879 aa18.33■□□□□ 0.52
RBFOX1-215ENST00000553186 RAB23Q9ULC3 237 aa18.33■□□□□ 0.52
RBFOX1-215ENST00000553186 ZNF451Q9Y4E5 1061 aa18.33■□□□□ 0.52
RBFOX1-215ENST00000553186 C5orf58C9J3I9 102 aa18.32■□□□□ 0.52
RBFOX1-215ENST00000553186 DLGAP1O14490 977 aa18.32■□□□□ 0.52
RBFOX1-215ENST00000553186 NME6O75414 186 aaPredicted RBP18.32■□□□□ 0.52
RBFOX1-215ENST00000553186 RPLP0P05388 317 aaKnown RBP18.32■□□□□ 0.52
RBFOX1-215ENST00000553186 FABP3P05413 133 aa18.32■□□□□ 0.52
RBFOX1-215ENST00000553186 MPLP40238 635 aa18.32■□□□□ 0.52
RBFOX1-215ENST00000553186 AVPR1BP47901 424 aa18.32■□□□□ 0.52
RBFOX1-215ENST00000553186 FAM214AQ32MH5 1076 aa18.32■□□□□ 0.52
RBFOX1-215ENST00000553186 TRMT12Q53H54 448 aaKnown RBP18.32■□□□□ 0.52
RBFOX1-215ENST00000553186 PRAMEF17Q5VTA0 474 aa18.32■□□□□ 0.52
RBFOX1-215ENST00000553186 METTL25Q8N6Q8 603 aa18.32■□□□□ 0.52
RBFOX1-215ENST00000553186 TREX2Q9BQ50 279 aaPredicted RBP18.32■□□□□ 0.52
RBFOX1-215ENST00000553186 RSPO3Q9BXY4 272 aaPredicted RBP18.32■□□□□ 0.52
RBFOX1-215ENST00000553186 C8orf4Q9NR00 106 aa18.32■□□□□ 0.52
RBFOX1-215ENST00000553186 RAB26Q9ULW5 256 aa18.32■□□□□ 0.52
RBFOX1-215ENST00000553186 CLDN16Q9Y5I7 305 aa18.32■□□□□ 0.52
RBFOX1-215ENST00000553186 KCNE3Q9Y6H6 103 aa18.32■□□□□ 0.52
RBFOX1-215ENST00000553186 TGFBR3LH3BV60 316 aa18.32■□□□□ 0.52
RBFOX1-215ENST00000553186 hCG_2039718K7EN88 272 aa18.32■□□□□ 0.52
RBFOX1-215ENST00000553186 EI24O14681 340 aa18.32■□□□□ 0.52
RBFOX1-215ENST00000553186 IFNA14P01570 189 aa18.32■□□□□ 0.52
RBFOX1-215ENST00000553186 CKMT1AP12532 417 aa18.32■□□□□ 0.52
RBFOX1-215ENST00000553186 HSPA13P48723 471 aa18.32■□□□□ 0.52
RBFOX1-215ENST00000553186 ANXA11P50995 505 aaKnown RBP18.32■□□□□ 0.52
RBFOX1-215ENST00000553186 MGAT2Q10469 447 aa18.32■□□□□ 0.52
RBFOX1-215ENST00000553186 PRICKLE4Q2TBC4 344 aa18.32■□□□□ 0.52
RBFOX1-215ENST00000553186 ARHGAP22Q7Z5H3 698 aa18.32■□□□□ 0.52
RBFOX1-215ENST00000553186 TSEN54Q7Z6J9 526 aaKnown RBP18.32■□□□□ 0.52
RBFOX1-215ENST00000553186 ADAMTS18Q8TE60 1221 aa18.32■□□□□ 0.52
RBFOX1-215ENST00000553186 ZNF501Q96CX3 271 aaPredicted RBP18.32■□□□□ 0.52
RBFOX1-215ENST00000553186 MS4A4EQ96PG1 132 aa18.32■□□□□ 0.52
RBFOX1-215ENST00000553186 OR7D2Q96RA2 312 aa18.32■□□□□ 0.52
RBFOX1-215ENST00000553186 LRRN3Q9H3W5 708 aa18.32■□□□□ 0.52
RBFOX1-215ENST00000553186 RUBCNLQ9H714 662 aa18.32■□□□□ 0.52
RBFOX1-215ENST00000553186 EQTNQ9NQ60 294 aa18.32■□□□□ 0.52
RBFOX1-215ENST00000553186 C19orf53Q9UNZ5 99 aaPredicted RBP18.32■□□□□ 0.52
RBFOX1-215ENST00000553186 PADI2Q9Y2J8 665 aa18.32■□□□□ 0.52
RBFOX1-215ENST00000553186 MAGED1Q9Y5V3 778 aaPredicted RBP18.32■□□□□ 0.52
RBFOX1-215ENST00000553186 PRAMEF25A6NGN4 478 aa18.31■□□□□ 0.52
RBFOX1-215ENST00000553186 ZNF749O43361 778 aa18.31■□□□□ 0.52
RBFOX1-215ENST00000553186 ASNA1O43681 348 aa18.31■□□□□ 0.52
RBFOX1-215ENST00000553186 SLC28A2O43868 658 aa18.31■□□□□ 0.52
RBFOX1-215ENST00000553186 PLOD3O60568 738 aa18.31■□□□□ 0.52
RBFOX1-215ENST00000553186 ANKRD34CP0C6C1 535 aa18.31■□□□□ 0.52
RBFOX1-215ENST00000553186 SLC35E2P0CK97 266 aa18.31■□□□□ 0.52
RBFOX1-215ENST00000553186 TXNL4AP83876 142 aaKnown RBP18.31■□□□□ 0.52
RBFOX1-215ENST00000553186 MFSD12Q6NUT3 480 aa18.31■□□□□ 0.52
RBFOX1-215ENST00000553186 TTLL10Q6ZVT0 673 aa18.31■□□□□ 0.52
RBFOX1-215ENST00000553186 ZNF595Q8IYB9 648 aa18.31■□□□□ 0.52
RBFOX1-215ENST00000553186 SMYD1Q8NB12 490 aa18.31■□□□□ 0.52
RBFOX1-215ENST00000553186 OR4D9Q8NGE8 314 aa18.31■□□□□ 0.52
RBFOX1-215ENST00000553186 OR51Q1Q8NH59 317 aa18.31■□□□□ 0.52
RBFOX1-215ENST00000553186 ZNF675Q8TD23 568 aa18.31■□□□□ 0.52
RBFOX1-215ENST00000553186 CTHRC1Q96CG8 243 aa18.31■□□□□ 0.52
RBFOX1-215ENST00000553186 ACTRT3Q9BYD9 372 aa18.31■□□□□ 0.52
RBFOX1-215ENST00000553186 ARRDC1-AS1Q9H2J1 176 aa18.31■□□□□ 0.52
RBFOX1-215ENST00000553186 FGF21Q9NSA1 209 aa18.31■□□□□ 0.52
RBFOX1-215ENST00000553186 MAT2BQ9NZL9 334 aa18.31■□□□□ 0.52
RBFOX1-215ENST00000553186 AP4B1Q9Y6B7 739 aa18.31■□□□□ 0.52
RBFOX1-215ENST00000553186 A0A087WV62 115 aa18.31■□□□□ 0.52
RBFOX1-215ENST00000553186 BLACEA4D250 179 aa18.31■□□□□ 0.52
RBFOX1-215ENST00000553186 DENRO43583 198 aaKnown RBP18.31■□□□□ 0.52
RBFOX1-215ENST00000553186 CTNSO60931 367 aa18.31■□□□□ 0.52
RBFOX1-215ENST00000553186 CDC123O75794 336 aaPredicted RBP18.31■□□□□ 0.52
RBFOX1-215ENST00000553186 SLITRK5O94991 958 aa18.31■□□□□ 0.52
RBFOX1-215ENST00000553186 MFN2O95140 757 aa18.31■□□□□ 0.52
RBFOX1-215ENST00000553186 PPP2R1BP30154 601 aa18.31■□□□□ 0.52
RBFOX1-215ENST00000553186 ERV3-1Q14264 604 aa18.31■□□□□ 0.52
RBFOX1-215ENST00000553186 DUSP7Q16829 419 aa18.31■□□□□ 0.52
RBFOX1-215ENST00000553186 NHSL2Q5HYW2 709 aa18.31■□□□□ 0.52
RBFOX1-215ENST00000553186 C6orf52Q5T4I8 152 aa18.31■□□□□ 0.52
RBFOX1-215ENST00000553186 TCEAL6Q6IPX3 200 aa18.31■□□□□ 0.52
RBFOX1-215ENST00000553186 TMEM179BQ7Z7N9 219 aa18.31■□□□□ 0.52
RBFOX1-215ENST00000553186 DOK4Q8TEW6 326 aa18.31■□□□□ 0.52
RBFOX1-215ENST00000553186 LZICQ8WZA0 190 aa18.31■□□□□ 0.52
RBFOX1-215ENST00000553186 TCEAL3Q969E4 200 aa18.31■□□□□ 0.52
RBFOX1-215ENST00000553186 MVB12AQ96EY5 273 aa18.31■□□□□ 0.52
RBFOX1-215ENST00000553186 VNN3Q9NY84 501 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms