RNA–Protein interactions for RNA: ENST00000553099.5

RAB3IP-218, Transcript of RAB3A interacting protein, humanhuman

TSL 2 BASIC

Gene RAB3IP, Length 2,674 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-218ENST00000553099 HDAC2Q92769 488 aaKnown RBP8.55□□□□□ -1.04
RAB3IP-218ENST00000553099 GTPBP3Q969Y2 492 aaKnown RBP8.55□□□□□ -1.04
RAB3IP-218ENST00000553099 ELP4Q96EB1 424 aa8.55□□□□□ -1.04
RAB3IP-218ENST00000553099 APOL4Q9BPW4 351 aa8.55□□□□□ -1.04
RAB3IP-218ENST00000553099 NIPSNAP1Q9BPW8 284 aa8.55□□□□□ -1.04
RAB3IP-218ENST00000553099 NPLQ9BXD5 320 aaPredicted RBP8.55□□□□□ -1.04
RAB3IP-218ENST00000553099 YTHDF1Q9BYJ9 559 aaKnown RBP8.55□□□□□ -1.04
RAB3IP-218ENST00000553099 SLC24A3Q9HC58 644 aa8.55□□□□□ -1.04
RAB3IP-218ENST00000553099 FAM60AQ9NP50 221 aa8.55□□□□□ -1.04
RAB3IP-218ENST00000553099 NAALAD2Q9Y3Q0 740 aa8.55□□□□□ -1.04
RAB3IP-218ENST00000553099 KCNE3Q9Y6H6 103 aa8.55□□□□□ -1.04
RAB3IP-218ENST00000553099 CEPT1Q9Y6K0 416 aa8.55□□□□□ -1.04
RAB3IP-218ENST00000553099 CACNA1IQ9P0X4 2223 aa8.55□□□□□ -1.04
RAB3IP-218ENST00000553099 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa8.55□□□□□ -1.04
RAB3IP-218ENST00000553099 TRIM64A6NGJ6 449 aa8.55□□□□□ -1.04
RAB3IP-218ENST00000553099 M0R3H8 397 aa8.55□□□□□ -1.04
RAB3IP-218ENST00000553099 ZSCAN9O15535 394 aaPredicted RBP8.55□□□□□ -1.04
RAB3IP-218ENST00000553099 DPM1O60762 260 aa8.55□□□□□ -1.04
RAB3IP-218ENST00000553099 UBXN7O94888 489 aa8.55□□□□□ -1.04
RAB3IP-218ENST00000553099 CSF2P04141 144 aa8.55□□□□□ -1.04
RAB3IP-218ENST00000553099 CHRM4P08173 479 aa8.55□□□□□ -1.04
RAB3IP-218ENST00000553099 RHCEP18577 417 aa8.55□□□□□ -1.04
RAB3IP-218ENST00000553099 CD247P20963 164 aa8.55□□□□□ -1.04
RAB3IP-218ENST00000553099 IL18R1Q13478 541 aa8.55□□□□□ -1.04
RAB3IP-218ENST00000553099 MICAQ29983 383 aa8.55□□□□□ -1.04
RAB3IP-218ENST00000553099 DEFB133Q30KQ1 61 aa8.55□□□□□ -1.04
RAB3IP-218ENST00000553099 LEXMQ3ZCV2 418 aa8.55□□□□□ -1.04
RAB3IP-218ENST00000553099 C6orf132Q5T0Z8 1188 aa8.55□□□□□ -1.04
RAB3IP-218ENST00000553099 FAM111BQ6SJ93 734 aa8.55□□□□□ -1.04
RAB3IP-218ENST00000553099 AVL9Q8NBF6 648 aa8.55□□□□□ -1.04
RAB3IP-218ENST00000553099 OR4K14Q8NGD5 310 aa8.55□□□□□ -1.04
RAB3IP-218ENST00000553099 RASSF5Q8WWW0 418 aa8.55□□□□□ -1.04
RAB3IP-218ENST00000553099 SHDQ96IW2 340 aa8.55□□□□□ -1.04
RAB3IP-218ENST00000553099 C10orf90Q96M02 699 aa8.55□□□□□ -1.04
RAB3IP-218ENST00000553099 ZNF681Q96N22 645 aa8.55□□□□□ -1.04
RAB3IP-218ENST00000553099 OR7D2Q96RA2 312 aa8.55□□□□□ -1.04
RAB3IP-218ENST00000553099 RSPO3Q9BXY4 272 aaPredicted RBP8.55□□□□□ -1.04
RAB3IP-218ENST00000553099 ZNF556Q9HAH1 456 aa8.55□□□□□ -1.04
RAB3IP-218ENST00000553099 VCX3AQ9NNX9 186 aa8.55□□□□□ -1.04
RAB3IP-218ENST00000553099 PAPOLBQ9NRJ5 636 aaKnown RBP8.55□□□□□ -1.04
RAB3IP-218ENST00000553099 IRAK4Q9NWZ3 460 aa8.55□□□□□ -1.04
RAB3IP-218ENST00000553099 KCMF1Q9P0J7 381 aa8.55□□□□□ -1.04
RAB3IP-218ENST00000553099 RSL24D1Q9UHA3 163 aaKnown RBP8.55□□□□□ -1.04
RAB3IP-218ENST00000553099 TMEM131Q92545 1883 aa8.54□□□□□ -1.04
RAB3IP-218ENST00000553099 UNC13CQ8NB66 2214 aa8.54□□□□□ -1.04
RAB3IP-218ENST00000553099 SGK494L7N484 410 aa8.54□□□□□ -1.04
RAB3IP-218ENST00000553099 TLR4O00206 839 aa8.54□□□□□ -1.04
RAB3IP-218ENST00000553099 TPST2O60704 377 aa8.54□□□□□ -1.04
RAB3IP-218ENST00000553099 CTSBP07858 339 aa8.54□□□□□ -1.04
RAB3IP-218ENST00000553099 SMIM10L1P0DMW3 83 aa8.54□□□□□ -1.04
RAB3IP-218ENST00000553099 NME1P15531 152 aaKnown RBP8.54□□□□□ -1.04
RAB3IP-218ENST00000553099 RYKP34925 604 aa8.54□□□□□ -1.04
RAB3IP-218ENST00000553099 RACK1P63244 317 aaKnown RBP8.54□□□□□ -1.04
RAB3IP-218ENST00000553099 RPP38P78345 283 aaKnown RBP8.54□□□□□ -1.04
RAB3IP-218ENST00000553099 FUT5Q11128 374 aa8.54□□□□□ -1.04
RAB3IP-218ENST00000553099 CDK5R2Q13319 367 aa8.54□□□□□ -1.04
RAB3IP-218ENST00000553099 KEAP1Q14145 624 aa8.54□□□□□ -1.04
RAB3IP-218ENST00000553099 RAB39AQ14964 217 aa8.54□□□□□ -1.04
RAB3IP-218ENST00000553099 ZNF773Q6PK81 442 aa8.54□□□□□ -1.04
RAB3IP-218ENST00000553099 FAM92BQ6ZTR7 304 aa8.54□□□□□ -1.04
RAB3IP-218ENST00000553099 RNF44Q7L0R7 432 aa8.54□□□□□ -1.04
RAB3IP-218ENST00000553099 C16orf62Q7Z3J2 963 aa8.54□□□□□ -1.04
RAB3IP-218ENST00000553099 GKN2Q86XP6 184 aa8.54□□□□□ -1.04
RAB3IP-218ENST00000553099 ARL14Q8N4G2 192 aa8.54□□□□□ -1.04
RAB3IP-218ENST00000553099 SIMC1Q8NDZ2 872 aa8.54□□□□□ -1.04
RAB3IP-218ENST00000553099 OR7G2Q8NG99 324 aa8.54□□□□□ -1.04
RAB3IP-218ENST00000553099 SLC9A6Q92581 669 aa8.54□□□□□ -1.04
RAB3IP-218ENST00000553099 MOAP1Q96BY2 351 aa8.54□□□□□ -1.04
RAB3IP-218ENST00000553099 THAP11Q96EK4 314 aa8.54□□□□□ -1.04
RAB3IP-218ENST00000553099 SMIM10Q96HG1 83 aa8.54□□□□□ -1.04
RAB3IP-218ENST00000553099 ZNF354BQ96LW1 612 aa8.54□□□□□ -1.04
RAB3IP-218ENST00000553099 ALPK1Q96QP1 1244 aa8.54□□□□□ -1.04
RAB3IP-218ENST00000553099 SLC38A3Q99624 504 aa8.54□□□□□ -1.04
RAB3IP-218ENST00000553099 WFDC6Q9BQY6 131 aa8.54□□□□□ -1.04
RAB3IP-218ENST00000553099 RBCK1Q9BYM8 510 aa8.54□□□□□ -1.04
RAB3IP-218ENST00000553099 TBC1D17Q9HA65 648 aa8.54□□□□□ -1.04
RAB3IP-218ENST00000553099 FANCEQ9HB96 536 aa8.54□□□□□ -1.04
RAB3IP-218ENST00000553099 CTPS2Q9NRF8 586 aa8.54□□□□□ -1.04
RAB3IP-218ENST00000553099 ACER3Q9NUN7 267 aa8.54□□□□□ -1.04
RAB3IP-218ENST00000553099 MS4A12Q9NXJ0 267 aa8.54□□□□□ -1.04
RAB3IP-218ENST00000553099 POMT2Q9UKY4 750 aa8.54□□□□□ -1.04
RAB3IP-218ENST00000553099 SLC22A7Q9Y694 548 aa8.54□□□□□ -1.04
RAB3IP-218ENST00000553099 COMMD3-BMI1R4GMX3 469 aa8.54□□□□□ -1.04
RAB3IP-218ENST00000553099 SPACA6W5XKT8 324 aa8.54□□□□□ -1.04
RAB3IP-218ENST00000553099 ASXL3Q9C0F0 2248 aa8.54□□□□□ -1.04
RAB3IP-218ENST00000553099 SLC9B1P1A6NJY1 282 aa8.54□□□□□ -1.04
RAB3IP-218ENST00000553099 CCNB2O95067 398 aa8.54□□□□□ -1.04
RAB3IP-218ENST00000553099 DCNP07585 359 aaKnown RBP8.54□□□□□ -1.04
RAB3IP-218ENST00000553099 ANXA8P13928 327 aa8.54□□□□□ -1.04
RAB3IP-218ENST00000553099 KCNJ5P48544 419 aa8.54□□□□□ -1.04
RAB3IP-218ENST00000553099 IDH2P48735 452 aaKnown RBP8.54□□□□□ -1.04
RAB3IP-218ENST00000553099 CSNK1EP49674 416 aaKnown RBP8.54□□□□□ -1.04
RAB3IP-218ENST00000553099 HPCAP84074 193 aa8.54□□□□□ -1.04
RAB3IP-218ENST00000553099 LAIR2Q6ISS4 152 aa8.54□□□□□ -1.04
RAB3IP-218ENST00000553099 LACC1Q8IV20 430 aa8.54□□□□□ -1.04
RAB3IP-218ENST00000553099 RBM12BQ8IXT5 1001 aaKnown RBP8.54□□□□□ -1.04
RAB3IP-218ENST00000553099 C19orf47Q8N9M1 422 aaKnown RBP8.54□□□□□ -1.04
RAB3IP-218ENST00000553099 OR4C15Q8NGM1 316 aa8.54□□□□□ -1.04
RAB3IP-218ENST00000553099 BBS10Q8TAM1 723 aa8.54□□□□□ -1.04
RAB3IP-218ENST00000553099 FAM174AQ8TBP5 190 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms